RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 KLK5Q9Y337 293 aaPredicted RBP14.86□□□□□ -0.03
TPM1-204ENST00000334895 C3orf84H3BNL1 204 aa14.85□□□□□ -0.03
TPM1-204ENST00000334895 NDUFA6P56556 154 aa14.85□□□□□ -0.03
TPM1-204ENST00000334895 RNASEKQ6P5S7 137 aaKnown RBP14.85□□□□□ -0.03
TPM1-204ENST00000334895 FA2HQ7L5A8 372 aa14.85□□□□□ -0.03
TPM1-204ENST00000334895 GTSF1LQ9H1H1 148 aa14.85□□□□□ -0.03
TPM1-204ENST00000334895 COTL1Q14019 142 aa14.84□□□□□ -0.03
TPM1-204ENST00000334895 COA6Q5JTJ3 125 aaKnown RBP14.84□□□□□ -0.03
TPM1-204ENST00000334895 CASC10Q5T4H9 136 aa14.84□□□□□ -0.03
TPM1-204ENST00000334895 APLNQ9ULZ1 77 aa14.84□□□□□ -0.03
TPM1-204ENST00000334895 AP5S1Q9NUS5 200 aa14.84□□□□□ -0.03
TPM1-204ENST00000334895 TMA7Q9Y2S6 64 aaKnown RBP14.84□□□□□ -0.03
TPM1-204ENST00000334895 FCER1GP30273 86 aa14.83□□□□□ -0.04
TPM1-204ENST00000334895 TCTAP57738 103 aa14.83□□□□□ -0.04
TPM1-204ENST00000334895 LYPD5Q6UWN5 251 aa14.83□□□□□ -0.04
TPM1-204ENST00000334895 LAGE3Q14657 143 aa14.82□□□□□ -0.04
TPM1-204ENST00000334895 CHCHD1Q96BP2 118 aaKnown RBP14.82□□□□□ -0.04
TPM1-204ENST00000334895 CHCHD7Q9BUK0 85 aa14.82□□□□□ -0.04
TPM1-204ENST00000334895 TRBV6-8A0A0A6YYG3 113 aa14.81□□□□□ -0.04
TPM1-204ENST00000334895 ESRGQ1W209 222 aa14.81□□□□□ -0.04
TPM1-204ENST00000334895 K7EMI3 77 aa14.81□□□□□ -0.04
TPM1-204ENST00000334895 ESDP10768 282 aa14.81□□□□□ -0.04
TPM1-204ENST00000334895 A0A096LNJ9 63 aa14.8□□□□□ -0.04
TPM1-204ENST00000334895 AMTP48728 403 aa14.8□□□□□ -0.04
TPM1-204ENST00000334895 TIRAPP58753 221 aa14.8□□□□□ -0.04
TPM1-204ENST00000334895 PMCHL1Q16048 86 aa14.8□□□□□ -0.04
TPM1-204ENST00000334895 TENM2Q9NT68 2774 aa14.79□□□□□ -0.04
TPM1-204ENST00000334895 ORMDL2Q53FV1 153 aa14.79□□□□□ -0.04
TPM1-204ENST00000334895 TMEM97Q5BJF2 176 aa14.79□□□□□ -0.04
TPM1-204ENST00000334895 IGHV1-24A0A0C4DH33 117 aa14.78□□□□□ -0.04
TPM1-204ENST00000334895 TRBV25-1A0A075B6N4 114 aa14.77□□□□□ -0.04
TPM1-204ENST00000334895 FAM19A2Q8N3H0 131 aa14.77□□□□□ -0.04
TPM1-204ENST00000334895 C20orf203Q8NBC4 194 aa14.77□□□□□ -0.04
TPM1-204ENST00000334895 HSBP1O75506 76 aa14.77□□□□□ -0.05
TPM1-204ENST00000334895 LELP1Q5T871 98 aa14.77□□□□□ -0.05
TPM1-204ENST00000334895 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.76□□□□□ -0.05
TPM1-204ENST00000334895 IGKV2-29A2NJV5 120 aaPredicted RBP14.76□□□□□ -0.05
TPM1-204ENST00000334895 RPL39P62891 51 aaKnown RBP14.76□□□□□ -0.05
TPM1-204ENST00000334895 TMEM243Q9BU79 118 aa14.76□□□□□ -0.05
TPM1-204ENST00000334895 S100A6P06703 90 aa14.75□□□□□ -0.05
TPM1-204ENST00000334895 LINC00588Q9Y4M8 146 aa14.75□□□□□ -0.05
TPM1-204ENST00000334895 BTF3P20290 206 aaKnown RBP14.74□□□□□ -0.05
TPM1-204ENST00000334895 SNRPEP62304 92 aaKnown RBP14.74□□□□□ -0.05
TPM1-204ENST00000334895 C2orf66Q6UXQ4 117 aa14.74□□□□□ -0.05
TPM1-204ENST00000334895 C5orf52A6NGY3 159 aa14.74□□□□□ -0.05
TPM1-204ENST00000334895 PDZD11Q5EBL8 140 aa14.74□□□□□ -0.05
TPM1-204ENST00000334895 HBDP02042 147 aa14.73□□□□□ -0.05
TPM1-204ENST00000334895 TOMM6Q96B49 74 aa14.72□□□□□ -0.05
TPM1-204ENST00000334895 CHCHD5Q9BSY4 110 aa14.72□□□□□ -0.05
TPM1-204ENST00000334895 LYSTQ99698 3801 aa14.71□□□□□ -0.05
TPM1-204ENST00000334895 GAGE6Q13070 117 aa14.71□□□□□ -0.05
TPM1-204ENST00000334895 WFDC10BQ8IUB3 73 aa14.71□□□□□ -0.05
TPM1-204ENST00000334895 HIST3H2BBQ8N257 126 aa14.71□□□□□ -0.05
TPM1-204ENST00000334895 CYSLTR1Q9Y271 337 aa14.71□□□□□ -0.05
TPM1-204ENST00000334895 CCL18P55774 89 aa14.7□□□□□ -0.06
TPM1-204ENST00000334895 MRPS16Q9Y3D3 137 aaKnown RBP14.7□□□□□ -0.06
TPM1-204ENST00000334895 Q8N3U1 123 aa14.7□□□□□ -0.06
TPM1-204ENST00000334895 UBE2D4Q9Y2X8 147 aa14.7□□□□□ -0.06
TPM1-204ENST00000334895 VPS13DQ5THJ4 4388 aa14.69□□□□□ -0.06
TPM1-204ENST00000334895 FGF6P10767 208 aa14.69□□□□□ -0.06
TPM1-204ENST00000334895 KMT2CQ8NEZ4 4911 aaKnown RBP14.68□□□□□ -0.06
TPM1-204ENST00000334895 TRAV8-6A0A0B4J262 113 aa14.68□□□□□ -0.06
TPM1-204ENST00000334895 IFITM10A6NMD0 228 aa14.68□□□□□ -0.06
TPM1-204ENST00000334895 H7C423 109 aa14.68□□□□□ -0.06
TPM1-204ENST00000334895 UBE2L6O14933 153 aa14.68□□□□□ -0.06
TPM1-204ENST00000334895 G0S2P27469 103 aa14.68□□□□□ -0.06
TPM1-204ENST00000334895 LINC00173Q6ZV60 143 aa14.68□□□□□ -0.06
TPM1-204ENST00000334895 FAM104AQ969W3 186 aa14.68□□□□□ -0.06
TPM1-204ENST00000334895 DNAH1Q9P2D7 4330 aa14.67□□□□□ -0.06
TPM1-204ENST00000334895 IGIPA6NJ69 53 aa14.67□□□□□ -0.06
TPM1-204ENST00000334895 MRPL52Q86TS9 123 aaKnown RBP14.67□□□□□ -0.06
TPM1-204ENST00000334895 TMEM18Q96B42 140 aa14.67□□□□□ -0.06
TPM1-204ENST00000334895 MPV17L2Q567V2 206 aa14.66□□□□□ -0.06
TPM1-204ENST00000334895 UPK3BQ9BT76 320 aa14.66□□□□□ -0.06
TPM1-204ENST00000334895 Q8N976 141 aa14.66□□□□□ -0.06
TPM1-204ENST00000334895 OPRPNQ99935 248 aaPredicted RBP14.66□□□□□ -0.06
TPM1-204ENST00000334895 TMEM262E9PQX1 116 aa14.65□□□□□ -0.06
TPM1-204ENST00000334895 SCGB3A1Q96QR1 104 aa14.65□□□□□ -0.06
TPM1-204ENST00000334895 TIMM21Q9BVV7 248 aa14.65□□□□□ -0.06
TPM1-204ENST00000334895 PYGO1Q9Y3Y4 419 aa14.65□□□□□ -0.06
TPM1-204ENST00000334895 IGLV4-60A0A075B6I1 120 aa14.64□□□□□ -0.07
TPM1-204ENST00000334895 FABP4P15090 132 aa14.64□□□□□ -0.07
TPM1-204ENST00000334895 PKIAP61925 76 aa14.64□□□□□ -0.07
TPM1-204ENST00000334895 RBX1P62877 108 aa14.64□□□□□ -0.07
TPM1-204ENST00000334895 HIST1H2BLQ99880 126 aa14.64□□□□□ -0.07
TPM1-204ENST00000334895 SPANXA1Q9NS26 97 aa14.64□□□□□ -0.07
TPM1-204ENST00000334895 LEPROTL1O95214 131 aa14.63□□□□□ -0.07
TPM1-204ENST00000334895 SMAGPQ0VAQ4 97 aa14.63□□□□□ -0.07
TPM1-204ENST00000334895 AMMECR1LQ6DCA0 310 aa14.63□□□□□ -0.07
TPM1-204ENST00000334895 ERASQ7Z444 233 aa14.63□□□□□ -0.07
TPM1-204ENST00000334895 CSDC2Q9Y534 153 aaKnown RBP14.63□□□□□ -0.07
TPM1-204ENST00000334895 LINC01549A6NIU2 74 aa14.63□□□□□ -0.07
TPM1-204ENST00000334895 UBE2DNLQ8IWF7 75 aa14.63□□□□□ -0.07
TPM1-204ENST00000334895 PACRGQ96M98 296 aaPredicted RBP14.63□□□□□ -0.07
TPM1-204ENST00000334895 TIMM17AQ99595 171 aa14.63□□□□□ -0.07
TPM1-204ENST00000334895 IGLV4-3A0A075B6K6 122 aa14.62□□□□□ -0.07
TPM1-204ENST00000334895 A0A1B0GUV1 79 aa14.62□□□□□ -0.07
TPM1-204ENST00000334895 ZNF25P17030 456 aaPredicted RBP14.62□□□□□ -0.07
TPM1-204ENST00000334895 S100A2P29034 98 aa14.62□□□□□ -0.07
TPM1-204ENST00000334895 Q6ZUT4 128 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms