RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 TRAV12-1A0A0B4J245 112 aa12.43□□□□□ -0.42
CLIP4-201ENST00000320081 C18orf65Q6ZTR6 163 aa12.42□□□□□ -0.42
CLIP4-201ENST00000320081 MRAPQ8TCY5 172 aa12.42□□□□□ -0.42
CLIP4-201ENST00000320081 ZFAND2AQ8N6M9 145 aa12.42□□□□□ -0.42
CLIP4-201ENST00000320081 CHD6Q8TD26 2715 aa12.41□□□□□ -0.42
CLIP4-201ENST00000320081 A8MZ25 164 aa12.41□□□□□ -0.42
CLIP4-201ENST00000320081 C11orf71Q6IPW1 123 aa12.41□□□□□ -0.42
CLIP4-201ENST00000320081 GPHB5Q86YW7 130 aa12.41□□□□□ -0.42
CLIP4-201ENST00000320081 URB1-AS1Q96HZ7 61 aa12.41□□□□□ -0.42
CLIP4-201ENST00000320081 DMXL2Q8TDJ6 3036 aa12.41□□□□□ -0.42
CLIP4-201ENST00000320081 IGHV4-4A0A075B6R2 117 aa12.41□□□□□ -0.42
CLIP4-201ENST00000320081 RNF185Q96GF1 192 aa12.4□□□□□ -0.42
CLIP4-201ENST00000320081 DEFB135Q30KP9 77 aa12.39□□□□□ -0.43
CLIP4-201ENST00000320081 Q6ZTI0 123 aa12.39□□□□□ -0.43
CLIP4-201ENST00000320081 TOMM6Q96B49 74 aa12.39□□□□□ -0.43
CLIP4-201ENST00000320081 SPAG8Q99932 426 aaPredicted RBP12.39□□□□□ -0.43
CLIP4-201ENST00000320081 ADGRG4Q8IZF6 3080 aa12.39□□□□□ -0.43
CLIP4-201ENST00000320081 PTPRBP23467 1997 aa12.39□□□□□ -0.43
CLIP4-201ENST00000320081 GYPEP15421 78 aa12.39□□□□□ -0.43
CLIP4-201ENST00000320081 RHOHQ15669 191 aa12.39□□□□□ -0.43
CLIP4-201ENST00000320081 Q9HAA7 133 aa12.39□□□□□ -0.43
CLIP4-201ENST00000320081 Q6ZUT4 128 aa12.38□□□□□ -0.43
CLIP4-201ENST00000320081 CLEC2BQ92478 149 aa12.38□□□□□ -0.43
CLIP4-201ENST00000320081 CMC4P56277 68 aaPredicted RBP12.38□□□□□ -0.43
CLIP4-201ENST00000320081 TAL2Q16559 108 aa12.38□□□□□ -0.43
CLIP4-201ENST00000320081 WFDC10AQ9H1F0 79 aa12.38□□□□□ -0.43
CLIP4-201ENST00000320081 E9PLD3 99 aa12.37□□□□□ -0.43
CLIP4-201ENST00000320081 CRLF1O75462 422 aa12.37□□□□□ -0.43
CLIP4-201ENST00000320081 PRSS47A8MTI9 375 aa12.37□□□□□ -0.43
CLIP4-201ENST00000320081 TEP1Q99973 2627 aaKnown RBP12.37□□□□□ -0.43
CLIP4-201ENST00000320081 EDA2RQ9HAV5 297 aa12.37□□□□□ -0.43
CLIP4-201ENST00000320081 HERVK_113P63121 156 aa12.37□□□□□ -0.43
CLIP4-201ENST00000320081 C20orf203Q8NBC4 194 aa12.37□□□□□ -0.43
CLIP4-201ENST00000320081 PIFOQ8TCI5 191 aa12.37□□□□□ -0.43
CLIP4-201ENST00000320081 RAI1Q7Z5J4 1906 aaPredicted RBP12.36□□□□□ -0.43
CLIP4-201ENST00000320081 G3V4G9 280 aa12.36□□□□□ -0.43
CLIP4-201ENST00000320081 IGHV3-30-3P0DP02 117 aa12.35□□□□□ -0.43
CLIP4-201ENST00000320081 FLNAP21333 2647 aaKnown RBP12.35□□□□□ -0.43
CLIP4-201ENST00000320081 K7EMT4 169 aa12.35□□□□□ -0.43
CLIP4-201ENST00000320081 IGHG4P01861 327 aa12.35□□□□□ -0.43
CLIP4-201ENST00000320081 EBI3Q14213 229 aa12.35□□□□□ -0.43
CLIP4-201ENST00000320081 ZNF561-AS1K7EIQ3 104 aa12.35□□□□□ -0.43
CLIP4-201ENST00000320081 TRBV6-1A0A0K0K1D8 114 aa12.34□□□□□ -0.43
CLIP4-201ENST00000320081 TNFRSF13BO14836 293 aaPredicted RBP12.34□□□□□ -0.43
CLIP4-201ENST00000320081 C15orf53Q8NAA6 179 aa12.34□□□□□ -0.43
CLIP4-201ENST00000320081 ZZEF1O43149 2961 aa12.34□□□□□ -0.43
CLIP4-201ENST00000320081 TRAV4A0A0B4J268 109 aa12.34□□□□□ -0.43
CLIP4-201ENST00000320081 MAP6D1Q9H9H5 199 aa12.33□□□□□ -0.44
CLIP4-201ENST00000320081 TRBV7-3A0A075B6L6 115 aa12.33□□□□□ -0.44
CLIP4-201ENST00000320081 CLPSL1A2RUU4 121 aa12.33□□□□□ -0.44
CLIP4-201ENST00000320081 KRTAP10-9P60411 292 aa12.33□□□□□ -0.44
CLIP4-201ENST00000320081 HAMPP81172 84 aa12.33□□□□□ -0.44
CLIP4-201ENST00000320081 K7EQG2 157 aa12.32□□□□□ -0.44
CLIP4-201ENST00000320081 CDKN2A-AS1Q9UH64 79 aa12.32□□□□□ -0.44
CLIP4-201ENST00000320081 KALRNO60229 2985 aa12.32□□□□□ -0.44
CLIP4-201ENST00000320081 RNASE3P12724 160 aaKnown RBP12.32□□□□□ -0.44
CLIP4-201ENST00000320081 C2orf91Q6ZV80 131 aa12.32□□□□□ -0.44
CLIP4-201ENST00000320081 Q8N6K4 173 aa12.32□□□□□ -0.44
CLIP4-201ENST00000320081 DNAJC9-AS1A6NH13 148 aa12.31□□□□□ -0.44
CLIP4-201ENST00000320081 IGHV3-30P01768 117 aa12.31□□□□□ -0.44
CLIP4-201ENST00000320081 IGHV3-33P01772 117 aa12.31□□□□□ -0.44
CLIP4-201ENST00000320081 IGHV3-30-5P0DP03 117 aa12.31□□□□□ -0.44
CLIP4-201ENST00000320081 CRYBA4P53673 196 aa12.31□□□□□ -0.44
CLIP4-201ENST00000320081 ANKRD29Q8N6D5 301 aa12.31□□□□□ -0.44
CLIP4-201ENST00000320081 F8W735 103 aaPredicted RBP12.31□□□□□ -0.44
CLIP4-201ENST00000320081 TRAV26-1A0A087WT03 109 aa12.3□□□□□ -0.44
CLIP4-201ENST00000320081 TRAV25A0A0B4J276 109 aa12.3□□□□□ -0.44
CLIP4-201ENST00000320081 K7EQD1 137 aa12.3□□□□□ -0.44
CLIP4-201ENST00000320081 ITPR3Q14573 2671 aa12.3□□□□□ -0.44
CLIP4-201ENST00000320081 SND1-IT1Q9HBX3 110 aa12.3□□□□□ -0.44
CLIP4-201ENST00000320081 ATMQ13315 3056 aa12.3□□□□□ -0.44
CLIP4-201ENST00000320081 TIMM17AQ99595 171 aa12.3□□□□□ -0.44
CLIP4-201ENST00000320081 SPANXA1Q9NS26 97 aa12.3□□□□□ -0.44
CLIP4-201ENST00000320081 BAALC-AS2P0C853 105 aa12.29□□□□□ -0.44
CLIP4-201ENST00000320081 ATP6V0E2Q8NHE4 81 aa12.29□□□□□ -0.44
CLIP4-201ENST00000320081 LINC00467Q9BRT7 94 aa12.29□□□□□ -0.44
CLIP4-201ENST00000320081 HIGD1BQ9P298 99 aa12.29□□□□□ -0.44
CLIP4-201ENST00000320081 TACC2O95359 2948 aa12.29□□□□□ -0.44
CLIP4-201ENST00000320081 SLC25A29Q8N8R3 303 aa12.29□□□□□ -0.44
CLIP4-201ENST00000320081 PRORYQ9H606 182 aa12.29□□□□□ -0.44
CLIP4-201ENST00000320081 UBE2DNLQ8IWF7 75 aa12.28□□□□□ -0.44
CLIP4-201ENST00000320081 PSCAO43653 123 aa12.28□□□□□ -0.44
CLIP4-201ENST00000320081 LINC01620Q4KN68 170 aa12.28□□□□□ -0.44
CLIP4-201ENST00000320081 LINC00482Q8N8I6 264 aa12.28□□□□□ -0.44
CLIP4-201ENST00000320081 B5MCH6 92 aa12.28□□□□□ -0.44
CLIP4-201ENST00000320081 NRACQ8N912 160 aa12.28□□□□□ -0.44
CLIP4-201ENST00000320081 VSIG2Q96IQ7 327 aa12.28□□□□□ -0.44
CLIP4-201ENST00000320081 MIR7-3HGQ8N6C7 128 aa12.27□□□□□ -0.44
CLIP4-201ENST00000320081 TCL1BO95988 128 aa12.27□□□□□ -0.45
CLIP4-201ENST00000320081 IGHV4-31P0DP07 118 aa12.27□□□□□ -0.45
CLIP4-201ENST00000320081 NEXN-AS1Q8NBZ9 246 aa12.27□□□□□ -0.45
CLIP4-201ENST00000320081 IGKV2D-24A0A075B6R9 120 aa12.26□□□□□ -0.45
CLIP4-201ENST00000320081 NDUFA11Q86Y39 141 aa12.26□□□□□ -0.45
CLIP4-201ENST00000320081 ICOSQ9Y6W8 199 aa12.26□□□□□ -0.45
CLIP4-201ENST00000320081 MRPS12O15235 138 aaKnown RBP12.26□□□□□ -0.45
CLIP4-201ENST00000320081 HHLA3Q9XRX5 114 aa12.26□□□□□ -0.45
CLIP4-201ENST00000320081 ATP5G1P05496 136 aa12.26□□□□□ -0.45
CLIP4-201ENST00000320081 MRGPRG-AS1Q2M3A8 158 aa12.25□□□□□ -0.45
CLIP4-201ENST00000320081 TEN1Q86WV5 123 aa12.25□□□□□ -0.45
CLIP4-201ENST00000320081 M0QY20 66 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms