RNA–Protein interactions for RNA: ENST00000310112.7

SNCB-201, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-201ENST00000310112 PRSS29PA6NIE9 313 aa16.82■□□□□ 0.28
SNCB-201ENST00000310112 MIFP14174 115 aa16.82■□□□□ 0.28
SNCB-201ENST00000310112 HHLA3Q9XRX5 114 aa16.82■□□□□ 0.28
SNCB-201ENST00000310112 TRGV4A0A0C4DH28 118 aa16.81■□□□□ 0.28
SNCB-201ENST00000310112 SLC25A29Q8N8R3 303 aa16.81■□□□□ 0.28
SNCB-201ENST00000310112 ZNRF2Q8NHG8 242 aa16.81■□□□□ 0.28
SNCB-201ENST00000310112 ANKRD39Q53RE8 183 aa16.8■□□□□ 0.28
SNCB-201ENST00000310112 OXLD1Q5BKU9 147 aa16.8■□□□□ 0.28
SNCB-201ENST00000310112 PRADC1Q9BSG0 188 aa16.8■□□□□ 0.28
SNCB-201ENST00000310112 SPANXA1Q9NS26 97 aa16.8■□□□□ 0.28
SNCB-201ENST00000310112 DEFB135Q30KP9 77 aa16.79■□□□□ 0.28
SNCB-201ENST00000310112 OR11H2Q8NH07 326 aa16.79■□□□□ 0.28
SNCB-201ENST00000310112 RNF183Q96D59 192 aa16.79■□□□□ 0.28
SNCB-201ENST00000310112 M0R143 59 aa16.78■□□□□ 0.28
SNCB-201ENST00000310112 DLEU1O43261 78 aa16.78■□□□□ 0.28
SNCB-201ENST00000310112 UBE2D3P61077 147 aa16.78■□□□□ 0.28
SNCB-201ENST00000310112 UBE2D2P62837 147 aa16.78■□□□□ 0.28
SNCB-201ENST00000310112 SMAGPQ0VAQ4 97 aa16.78■□□□□ 0.28
SNCB-201ENST00000310112 STPG4Q8N801 248 aa16.78■□□□□ 0.28
SNCB-201ENST00000310112 CHCHD7Q9BUK0 85 aa16.78■□□□□ 0.28
SNCB-201ENST00000310112 CST9LQ9H4G1 147 aa16.78■□□□□ 0.28
SNCB-201ENST00000310112 NOTCH3Q9UM47 2321 aa16.78■□□□□ 0.28
SNCB-201ENST00000310112 EMP1P54849 157 aa16.77■□□□□ 0.28
SNCB-201ENST00000310112 FHL2Q14192 279 aa16.77■□□□□ 0.28
SNCB-201ENST00000310112 Q9UF83 564 aa16.77■□□□□ 0.28
SNCB-201ENST00000310112 TENM1Q9UKZ4 2725 aa16.77■□□□□ 0.28
SNCB-201ENST00000310112 ZC2HC1BQ5TFG8 222 aa16.77■□□□□ 0.27
SNCB-201ENST00000310112 TIMM21Q9BVV7 248 aa16.77■□□□□ 0.27
SNCB-201ENST00000310112 NIPBLQ6KC79 2804 aaeCLIP16.76■□□□□ 0.27
SNCB-201ENST00000310112 DEFB104AQ8WTQ1 72 aa16.76■□□□□ 0.27
SNCB-201ENST00000310112 GTSF1LQ9H1H1 148 aa16.76■□□□□ 0.27
SNCB-201ENST00000310112 KRTAP10-11P60412 298 aa16.75■□□□□ 0.27
SNCB-201ENST00000310112 CTAG1AP78358 180 aa16.75■□□□□ 0.27
SNCB-201ENST00000310112 PHLDA1Q8WV24 401 aaPredicted RBP16.75■□□□□ 0.27
SNCB-201ENST00000310112 IGLV4-3A0A075B6K6 122 aa16.74■□□□□ 0.27
SNCB-201ENST00000310112 TMEM97Q5BJF2 176 aa16.74■□□□□ 0.27
SNCB-201ENST00000310112 BOD1L2Q8IYS8 172 aa16.74■□□□□ 0.27
SNCB-201ENST00000310112 VCX2Q9H322 139 aa16.74■□□□□ 0.27
SNCB-201ENST00000310112 IGHV4-28A0A0C4DH34 117 aa16.73■□□□□ 0.27
SNCB-201ENST00000310112 TEX48A0A1B0GUV7 120 aa16.73■□□□□ 0.27
SNCB-201ENST00000310112 GAGE12JA6NER3 117 aa16.73■□□□□ 0.27
SNCB-201ENST00000310112 SIVA1O15304 175 aa16.73■□□□□ 0.27
SNCB-201ENST00000310112 DEFB130BP0DP73 79 aa16.73■□□□□ 0.27
SNCB-201ENST00000310112 DEFB130AP0DP74 79 aa16.73■□□□□ 0.27
SNCB-201ENST00000310112 GAGE1Q13065 139 aa16.73■□□□□ 0.27
SNCB-201ENST00000310112 GAGE4Q13068 117 aa16.73■□□□□ 0.27
SNCB-201ENST00000310112 GAGE5Q13069 117 aa16.73■□□□□ 0.27
SNCB-201ENST00000310112 GAGE13Q4V321 117 aa16.73■□□□□ 0.27
SNCB-201ENST00000310112 FAM222AQ5U5X8 452 aa16.72■□□□□ 0.27
SNCB-201ENST00000310112 Q8NAQ8 132 aa16.72■□□□□ 0.27
SNCB-201ENST00000310112 IGHV3-38A0A0C4DH36 116 aa16.71■□□□□ 0.27
SNCB-201ENST00000310112 FGF6P10767 208 aa16.71■□□□□ 0.27
SNCB-201ENST00000310112 MRPS36P82909 103 aaKnown RBP16.71■□□□□ 0.27
SNCB-201ENST00000310112 AMELXQ99217 191 aa16.71■□□□□ 0.27
SNCB-201ENST00000310112 SNHG12Q9BXW3 62 aa16.71■□□□□ 0.27
SNCB-201ENST00000310112 UBE2D4Q9Y2X8 147 aa16.71■□□□□ 0.27
SNCB-201ENST00000310112 NFE4Q86UQ8 179 aa16.7■□□□□ 0.26
SNCB-201ENST00000310112 C2orf88Q9BSF0 95 aa16.7■□□□□ 0.26
SNCB-201ENST00000310112 IGLV4-69A0A075B6H9 119 aa16.69■□□□□ 0.26
SNCB-201ENST00000310112 H7C423 109 aa16.69■□□□□ 0.26
SNCB-201ENST00000310112 LINC00694P0DN24 101 aa16.69■□□□□ 0.26
SNCB-201ENST00000310112 NMUP48645 174 aa16.69■□□□□ 0.26
SNCB-201ENST00000310112 HERVK_113P61574 105 aa16.69■□□□□ 0.26
SNCB-201ENST00000310112 CSDC2Q9Y534 153 aaKnown RBP16.69■□□□□ 0.26
SNCB-201ENST00000310112 SPART-AS1P0CW21 52 aa16.68■□□□□ 0.26
SNCB-201ENST00000310112 PRO0255Q9UI72 69 aa16.68■□□□□ 0.26
SNCB-201ENST00000310112 VWFP04275 2813 aa16.68■□□□□ 0.26
SNCB-201ENST00000310112 C11orf86A6NJI1 115 aa16.67■□□□□ 0.26
SNCB-201ENST00000310112 SAMD5Q5TGI4 173 aa16.67■□□□□ 0.26
SNCB-201ENST00000310112 E9PLD3 99 aa16.66■□□□□ 0.26
SNCB-201ENST00000310112 DAD1P61803 113 aa16.66■□□□□ 0.26
SNCB-201ENST00000310112 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.65■□□□□ 0.26
SNCB-201ENST00000310112 IGKV2-29A2NJV5 120 aaPredicted RBP16.65■□□□□ 0.26
SNCB-201ENST00000310112 EREGO14944 169 aa16.65■□□□□ 0.26
SNCB-201ENST00000310112 SBSPONQ8IVN8 264 aa16.65■□□□□ 0.26
SNCB-201ENST00000310112 DGAT2L7PQ6IED9 249 aa16.64■□□□□ 0.26
SNCB-201ENST00000310112 NTM-AS1Q6ZSK4 140 aa16.64■□□□□ 0.26
SNCB-201ENST00000310112 OPRPNQ99935 248 aaPredicted RBP16.64■□□□□ 0.26
SNCB-201ENST00000310112 TMEM243Q9BU79 118 aa16.64■□□□□ 0.26
SNCB-201ENST00000310112 TRBV25-1A0A075B6N4 114 aa16.64■□□□□ 0.25
SNCB-201ENST00000310112 IGKV2D-26A0A0A0MRZ7 120 aa16.64■□□□□ 0.25
SNCB-201ENST00000310112 C2orf91Q6ZV80 131 aa16.63■□□□□ 0.25
SNCB-201ENST00000310112 PCP2Q8IVA1 136 aa16.63■□□□□ 0.25
SNCB-201ENST00000310112 FAM104AQ969W3 186 aa16.63■□□□□ 0.25
SNCB-201ENST00000310112 HIGD1BQ9P298 99 aa16.63■□□□□ 0.25
SNCB-201ENST00000310112 LOC100131303A0A0U1RQF7 123 aa16.62■□□□□ 0.25
SNCB-201ENST00000310112 ATP5G1P05496 136 aa16.62■□□□□ 0.25
SNCB-201ENST00000310112 CHAC1Q9BUX1 264 aa16.62■□□□□ 0.25
SNCB-201ENST00000310112 G3V4G9 280 aa16.61■□□□□ 0.25
SNCB-201ENST00000310112 UBE2L6O14933 153 aa16.6■□□□□ 0.25
SNCB-201ENST00000310112 ZNF25P17030 456 aaPredicted RBP16.6■□□□□ 0.25
SNCB-201ENST00000310112 TMEM170BQ5T4T1 132 aa16.6■□□□□ 0.25
SNCB-201ENST00000310112 TINCRA0A1B0GVN0 87 aa16.59■□□□□ 0.25
SNCB-201ENST00000310112 PAX4O43316 350 aa16.59■□□□□ 0.25
SNCB-201ENST00000310112 COL5A1-AS1Q5SY13 56 aa16.59■□□□□ 0.25
SNCB-201ENST00000310112 ATP6V0E2Q8NHE4 81 aa16.59■□□□□ 0.25
SNCB-201ENST00000310112 TRBV6-8A0A0A6YYG3 113 aa16.58■□□□□ 0.24
SNCB-201ENST00000310112 GYPEP15421 78 aa16.58■□□□□ 0.24
SNCB-201ENST00000310112 TCTAP57738 103 aa16.58■□□□□ 0.24
SNCB-201ENST00000310112 CEMP1Q6PRD7 247 aaPredicted RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms