RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 IGKV2-29A2NJV5 120 aaPredicted RBP8.43□□□□□ -1.06
PTPN2-201ENST00000309660 ADARB2-AS1A8MUL3 147 aa8.43□□□□□ -1.06
PTPN2-201ENST00000309660 H3BMG7 143 aa8.43□□□□□ -1.06
PTPN2-201ENST00000309660 ODF3L2Q3SX64 289 aa8.43□□□□□ -1.06
PTPN2-201ENST00000309660 LOC107984156A0A0G2JMH3 177 aa8.42□□□□□ -1.06
PTPN2-201ENST00000309660 RHOHQ15669 191 aa8.42□□□□□ -1.06
PTPN2-201ENST00000309660 TAL2Q16559 108 aa8.42□□□□□ -1.06
PTPN2-201ENST00000309660 ARL17AQ8IVW1 177 aa8.42□□□□□ -1.06
PTPN2-201ENST00000309660 PGPEP1Q9NXJ5 209 aa8.42□□□□□ -1.06
PTPN2-201ENST00000309660 TRGV1A0A0A0MS02 117 aa8.42□□□□□ -1.06
PTPN2-201ENST00000309660 A8MWV9 139 aa8.42□□□□□ -1.06
PTPN2-201ENST00000309660 J3QQQ9 107 aa8.42□□□□□ -1.06
PTPN2-201ENST00000309660 OR5A1Q8NGJ0 315 aa8.42□□□□□ -1.06
PTPN2-201ENST00000309660 LINC01549A6NIU2 74 aa8.42□□□□□ -1.06
PTPN2-201ENST00000309660 NSUN5P1Q3KNT7 163 aa8.42□□□□□ -1.06
PTPN2-201ENST00000309660 WFDC10AQ9H1F0 79 aa8.42□□□□□ -1.06
PTPN2-201ENST00000309660 UNC79Q9P2D8 2635 aa8.41□□□□□ -1.06
PTPN2-201ENST00000309660 IGLV4-3A0A075B6K6 122 aa8.41□□□□□ -1.06
PTPN2-201ENST00000309660 CFAP126Q5VTH2 177 aa8.41□□□□□ -1.06
PTPN2-201ENST00000309660 SETXQ7Z333 2677 aaKnown RBP8.4□□□□□ -1.06
PTPN2-201ENST00000309660 H7C2G1 150 aa8.4□□□□□ -1.06
PTPN2-201ENST00000309660 RPL35AP18077 110 aaKnown RBP8.4□□□□□ -1.06
PTPN2-201ENST00000309660 A0A0J9YY99 117 aa8.39□□□□□ -1.07
PTPN2-201ENST00000309660 TMEM238LA0A1B0GVL6 79 aa8.39□□□□□ -1.07
PTPN2-201ENST00000309660 A6NJY4 79 aa8.39□□□□□ -1.07
PTPN2-201ENST00000309660 TRAV2A0A0B4J234 112 aa8.39□□□□□ -1.07
PTPN2-201ENST00000309660 RRN3P1Q2M238 152 aa8.39□□□□□ -1.07
PTPN2-201ENST00000309660 DGAT2L7PQ6IED9 249 aa8.39□□□□□ -1.07
PTPN2-201ENST00000309660 TRAV8-3A0A0A6YYJ7 113 aa8.39□□□□□ -1.07
PTPN2-201ENST00000309660 LINC01006Q8NI28 216 aa8.39□□□□□ -1.07
PTPN2-201ENST00000309660 ZNF22P17026 224 aaPredicted RBP8.38□□□□□ -1.07
PTPN2-201ENST00000309660 SMR3AQ99954 134 aa8.38□□□□□ -1.07
PTPN2-201ENST00000309660 COTL1Q14019 142 aa8.38□□□□□ -1.07
PTPN2-201ENST00000309660 WFDC2Q14508 124 aa8.38□□□□□ -1.07
PTPN2-201ENST00000309660 RHODO00212 210 aa8.38□□□□□ -1.07
PTPN2-201ENST00000309660 TMEM86BQ8N661 226 aa8.38□□□□□ -1.07
PTPN2-201ENST00000309660 C11orf72Q8NBR9 251 aa8.38□□□□□ -1.07
PTPN2-201ENST00000309660 A8MZ25 164 aa8.37□□□□□ -1.07
PTPN2-201ENST00000309660 PRSS2P07478 247 aa8.37□□□□□ -1.07
PTPN2-201ENST00000309660 LINC00467Q9BRT7 94 aa8.37□□□□□ -1.07
PTPN2-201ENST00000309660 TEX48A0A1B0GUV7 120 aa8.37□□□□□ -1.07
PTPN2-201ENST00000309660 NPC2P61916 151 aa8.37□□□□□ -1.07
PTPN2-201ENST00000309660 Q6ZTI0 123 aa8.37□□□□□ -1.07
PTPN2-201ENST00000309660 SH2D6Q7Z4S9 175 aa8.37□□□□□ -1.07
PTPN2-201ENST00000309660 C1orf158Q8N1D5 194 aa8.37□□□□□ -1.07
PTPN2-201ENST00000309660 TEX29Q8N6K0 151 aa8.37□□□□□ -1.07
PTPN2-201ENST00000309660 TMEM223A0PJW6 202 aa8.36□□□□□ -1.07
PTPN2-201ENST00000309660 ETDBQ3ZM63 59 aa8.36□□□□□ -1.07
PTPN2-201ENST00000309660 Q6ZUT4 128 aa8.36□□□□□ -1.07
PTPN2-201ENST00000309660 PSMB2P49721 201 aa8.36□□□□□ -1.07
PTPN2-201ENST00000309660 TIMM21Q9BVV7 248 aa8.36□□□□□ -1.07
PTPN2-201ENST00000309660 NOP10Q9NPE3 64 aaKnown RBP8.36□□□□□ -1.07
PTPN2-201ENST00000309660 TSSC4Q9Y5U2 329 aaPredicted RBP8.36□□□□□ -1.07
PTPN2-201ENST00000309660 SPINK8P0C7L1 97 aa8.35□□□□□ -1.07
PTPN2-201ENST00000309660 NFE4Q86UQ8 179 aa8.35□□□□□ -1.07
PTPN2-201ENST00000309660 ZNF418Q8TF45 676 aaPredicted RBP8.35□□□□□ -1.07
PTPN2-201ENST00000309660 GEMIN7Q9H840 131 aaKnown RBP8.35□□□□□ -1.07
PTPN2-201ENST00000309660 SCGB1C2P0DMR2 95 aa8.35□□□□□ -1.07
PTPN2-201ENST00000309660 GAGE12JA6NER3 117 aa8.34□□□□□ -1.07
PTPN2-201ENST00000309660 A8MTW9 85 aa8.34□□□□□ -1.07
PTPN2-201ENST00000309660 J3QKU1 62 aa8.34□□□□□ -1.07
PTPN2-201ENST00000309660 LEPROTO15243 131 aa8.34□□□□□ -1.07
PTPN2-201ENST00000309660 GAGE4Q13068 117 aa8.34□□□□□ -1.07
PTPN2-201ENST00000309660 GAGE5Q13069 117 aa8.34□□□□□ -1.07
PTPN2-201ENST00000309660 GAGE13Q4V321 117 aa8.34□□□□□ -1.07
PTPN2-201ENST00000309660 SLC25A29Q8N8R3 303 aa8.34□□□□□ -1.07
PTPN2-201ENST00000309660 PDZD2O15018 2839 aa8.34□□□□□ -1.07
PTPN2-201ENST00000309660 TSPAN13O95857 204 aa8.34□□□□□ -1.07
PTPN2-201ENST00000309660 IGHV3-30-3P0DP02 117 aa8.34□□□□□ -1.07
PTPN2-201ENST00000309660 CHCHD7Q9BUK0 85 aa8.34□□□□□ -1.07
PTPN2-201ENST00000309660 NBEAL2Q6ZNJ1 2754 aa8.34□□□□□ -1.07
PTPN2-201ENST00000309660 TRGV2A0A075B6R0 118 aa8.34□□□□□ -1.07
PTPN2-201ENST00000309660 PLA2G2AP14555 144 aa8.34□□□□□ -1.07
PTPN2-201ENST00000309660 A0A1B0GWB2 263 aa8.33□□□□□ -1.08
PTPN2-201ENST00000309660 A4D1N5 150 aa8.33□□□□□ -1.08
PTPN2-201ENST00000309660 GAGE7O76087 117 aa8.33□□□□□ -1.08
PTPN2-201ENST00000309660 IGHV3-30P01768 117 aa8.33□□□□□ -1.08
PTPN2-201ENST00000309660 GAGE12FP0CL80 117 aa8.33□□□□□ -1.08
PTPN2-201ENST00000309660 GAGE12GP0CL81 117 aa8.33□□□□□ -1.08
PTPN2-201ENST00000309660 GAGE12IP0CL82 117 aa8.33□□□□□ -1.08
PTPN2-201ENST00000309660 IGHV3-30-5P0DP03 117 aa8.33□□□□□ -1.08
PTPN2-201ENST00000309660 FHL3Q13643 280 aa8.33□□□□□ -1.08
PTPN2-201ENST00000309660 Q1RN00 199 aa8.33□□□□□ -1.08
PTPN2-201ENST00000309660 NDUFA11Q86Y39 141 aa8.33□□□□□ -1.08
PTPN2-201ENST00000309660 UBE2D4Q9Y2X8 147 aa8.33□□□□□ -1.08
PTPN2-201ENST00000309660 GCN1Q92616 2671 aaKnown RBP8.33□□□□□ -1.08
PTPN2-201ENST00000309660 A0A0U1RRA0 63 aa8.33□□□□□ -1.08
PTPN2-201ENST00000309660 KRTAP1-1Q07627 177 aa8.33□□□□□ -1.08
PTPN2-201ENST00000309660 C10orf126Q8N4M7 172 aa8.33□□□□□ -1.08
PTPN2-201ENST00000309660 AMELXQ99217 191 aa8.33□□□□□ -1.08
PTPN2-201ENST00000309660 NDUFA7O95182 113 aa8.32□□□□□ -1.08
PTPN2-201ENST00000309660 CFC1BP0CG36 223 aa8.32□□□□□ -1.08
PTPN2-201ENST00000309660 CFC1P0CG37 223 aa8.32□□□□□ -1.08
PTPN2-201ENST00000309660 UBE2D1P51668 147 aa8.32□□□□□ -1.08
PTPN2-201ENST00000309660 MUSTN1Q8IVN3 82 aa8.32□□□□□ -1.08
PTPN2-201ENST00000309660 TRAV13-1A0A0B4J241 112 aa8.32□□□□□ -1.08
PTPN2-201ENST00000309660 TRAV25A0A0B4J276 109 aa8.32□□□□□ -1.08
PTPN2-201ENST00000309660 IGKV3OR2-268A0A0C4DH90 116 aa8.31□□□□□ -1.08
PTPN2-201ENST00000309660 RS1O15537 224 aa8.31□□□□□ -1.08
PTPN2-201ENST00000309660 FAM104AQ969W3 186 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms