RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 MDFICQ9P1T7 246 aa12.12□□□□□ -0.47
CCDC8-201ENST00000307522 TRBV10-2A0A0K0K1G8 114 aa12.11□□□□□ -0.47
CCDC8-201ENST00000307522 BUB3O43684 328 aa12.11□□□□□ -0.47
CCDC8-201ENST00000307522 LINC00477Q96M19 166 aa12.11□□□□□ -0.47
CCDC8-201ENST00000307522 ZNF843Q8N446 348 aa12.11□□□□□ -0.47
CCDC8-201ENST00000307522 C20orf173Q96LM9 149 aa12.11□□□□□ -0.47
CCDC8-201ENST00000307522 A0A0J9YXV3 536 aa12.11□□□□□ -0.47
CCDC8-201ENST00000307522 FN1P02751 2386 aaKnown RBP12.1□□□□□ -0.47
CCDC8-201ENST00000307522 C10orf105Q8TEF2 133 aa12.09□□□□□ -0.47
CCDC8-201ENST00000307522 HIVEP2P31629 2446 aa12.09□□□□□ -0.47
CCDC8-201ENST00000307522 IGIPA6NJ69 53 aa12.09□□□□□ -0.47
CCDC8-201ENST00000307522 GPHB5Q86YW7 130 aa12.09□□□□□ -0.47
CCDC8-201ENST00000307522 NPBQ8NG41 125 aa12.09□□□□□ -0.47
CCDC8-201ENST00000307522 HERVK_113P63121 156 aa12.09□□□□□ -0.47
CCDC8-201ENST00000307522 ADAMTSL4-AS1Q5T5F5 129 aa12.08□□□□□ -0.48
CCDC8-201ENST00000307522 UNC79Q9P2D8 2635 aa12.08□□□□□ -0.48
CCDC8-201ENST00000307522 EDN2P20800 178 aa12.08□□□□□ -0.48
CCDC8-201ENST00000307522 PF4V1P10720 104 aa12.07□□□□□ -0.48
CCDC8-201ENST00000307522 NSUN5P1Q3KNT7 163 aa12.07□□□□□ -0.48
CCDC8-201ENST00000307522 ICOSQ9Y6W8 199 aa12.07□□□□□ -0.48
CCDC8-201ENST00000307522 SDHAF1A6NFY7 115 aa12.07□□□□□ -0.48
CCDC8-201ENST00000307522 SRSF2Q01130 221 aaKnown RBP12.07□□□□□ -0.48
CCDC8-201ENST00000307522 Q6Q795 121 aa12.07□□□□□ -0.48
CCDC8-201ENST00000307522 FAM19A5Q7Z5A7 132 aaPredicted RBP12.07□□□□□ -0.48
CCDC8-201ENST00000307522 SMCR5Q8TEV8 140 aa12.07□□□□□ -0.48
CCDC8-201ENST00000307522 IGHV1-69DA0A0B4J2H0 117 aa12.06□□□□□ -0.48
CCDC8-201ENST00000307522 IGHV1-69P01742 117 aa12.06□□□□□ -0.48
CCDC8-201ENST00000307522 Q8N6K4 173 aa12.06□□□□□ -0.48
CCDC8-201ENST00000307522 CYSTM1Q9H1C7 97 aa12.06□□□□□ -0.48
CCDC8-201ENST00000307522 IGKV3-20P01619 116 aa12.05□□□□□ -0.48
CCDC8-201ENST00000307522 IGHV4-59P01825 116 aa12.05□□□□□ -0.48
CCDC8-201ENST00000307522 C9orf47Q6ZRZ4 202 aa12.05□□□□□ -0.48
CCDC8-201ENST00000307522 MSMBP08118 114 aa12.05□□□□□ -0.48
CCDC8-201ENST00000307522 MINOS1Q5TGZ0 78 aa12.05□□□□□ -0.48
CCDC8-201ENST00000307522 SUMO4Q6EEV6 95 aa12.05□□□□□ -0.48
CCDC8-201ENST00000307522 MINOS1-NBL1R4GNA1 71 aa12.05□□□□□ -0.48
CCDC8-201ENST00000307522 ZFAND3Q9H8U3 227 aa12.04□□□□□ -0.48
CCDC8-201ENST00000307522 A0A0J9YXY3 114 aa12.04□□□□□ -0.48
CCDC8-201ENST00000307522 RPL13AP40429 203 aaKnown RBP12.04□□□□□ -0.48
CCDC8-201ENST00000307522 P0DMU3 169 aa12.03□□□□□ -0.48
CCDC8-201ENST00000307522 FAM231AP0DMU4 169 aa12.03□□□□□ -0.48
CCDC8-201ENST00000307522 FAM231CP0DMU5 169 aa12.03□□□□□ -0.48
CCDC8-201ENST00000307522 ZNF625Q96I27 306 aaPredicted RBP12.03□□□□□ -0.48
CCDC8-201ENST00000307522 CCDC140Q96MF4 163 aa12.03□□□□□ -0.48
CCDC8-201ENST00000307522 METTL26Q96S19 204 aa12.03□□□□□ -0.48
CCDC8-201ENST00000307522 C5orf56Q8N8D9 126 aa12.03□□□□□ -0.48
CCDC8-201ENST00000307522 TMEM101Q96IK0 257 aa12.03□□□□□ -0.48
CCDC8-201ENST00000307522 NDUFA7O95182 113 aa12.03□□□□□ -0.48
CCDC8-201ENST00000307522 ZNF876PQ49A33 203 aa12.03□□□□□ -0.48
CCDC8-201ENST00000307522 UNQ9165/PRO28630Q6UXU0 137 aa12.03□□□□□ -0.48
CCDC8-201ENST00000307522 C11orf44Q8N8P7 122 aa12.03□□□□□ -0.48
CCDC8-201ENST00000307522 RNF5Q99942 180 aa12.03□□□□□ -0.48
CCDC8-201ENST00000307522 I3L3M4 83 aa12.02□□□□□ -0.48
CCDC8-201ENST00000307522 RNASE3P12724 160 aaKnown RBP12.02□□□□□ -0.48
CCDC8-201ENST00000307522 ZFAND2AQ8N6M9 145 aa12.02□□□□□ -0.49
CCDC8-201ENST00000307522 KIR2DL5BQ8NHK3 375 aa12.02□□□□□ -0.49
CCDC8-201ENST00000307522 IGHV3-73A0A0B4J1V6 119 aa12.01□□□□□ -0.49
CCDC8-201ENST00000307522 A0A0B4J2C4 111 aa12.01□□□□□ -0.49
CCDC8-201ENST00000307522 TMEM223A0PJW6 202 aa12.01□□□□□ -0.49
CCDC8-201ENST00000307522 IGHV4-4A0A075B6R2 117 aa12.01□□□□□ -0.49
CCDC8-201ENST00000307522 hADV29S1A0JD25 119 aa12.01□□□□□ -0.49
CCDC8-201ENST00000307522 DEFB112Q30KQ8 113 aa12.01□□□□□ -0.49
CCDC8-201ENST00000307522 TMEM126AQ9H061 195 aa12.01□□□□□ -0.49
CCDC8-201ENST00000307522 M0R2P5 195 aa12.01□□□□□ -0.49
CCDC8-201ENST00000307522 SMIM9A6NGZ8 99 aa12□□□□□ -0.49
CCDC8-201ENST00000307522 IGHV3-30-3P0DP02 117 aa11.99□□□□□ -0.49
CCDC8-201ENST00000307522 RHOHQ15669 191 aa11.99□□□□□ -0.49
CCDC8-201ENST00000307522 POM121L12Q8N7R1 296 aa11.99□□□□□ -0.49
CCDC8-201ENST00000307522 HTN1P15515 57 aa11.99□□□□□ -0.49
CCDC8-201ENST00000307522 PAPPA-AS1Q5QFB9 102 aa11.99□□□□□ -0.49
CCDC8-201ENST00000307522 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.98□□□□□ -0.49
CCDC8-201ENST00000307522 TRAV13-1A0A0B4J241 112 aa11.98□□□□□ -0.49
CCDC8-201ENST00000307522 LEPROTO15243 131 aa11.98□□□□□ -0.49
CCDC8-201ENST00000307522 C3orf22Q8N5N4 141 aa11.98□□□□□ -0.49
CCDC8-201ENST00000307522 TRAV21A0A0B4J279 112 aa11.98□□□□□ -0.49
CCDC8-201ENST00000307522 DNAJC30Q96LL9 226 aa11.98□□□□□ -0.49
CCDC8-201ENST00000307522 TRBV30A0A0K0K1B3 111 aa11.98□□□□□ -0.49
CCDC8-201ENST00000307522 NXPH4O95158 308 aa11.98□□□□□ -0.49
CCDC8-201ENST00000307522 COX6CP09669 75 aa11.98□□□□□ -0.49
CCDC8-201ENST00000307522 EBI3Q14213 229 aa11.97□□□□□ -0.49
CCDC8-201ENST00000307522 MOB4Q9Y3A3 225 aa11.97□□□□□ -0.49
CCDC8-201ENST00000307522 LINC00315P59091 139 aa11.97□□□□□ -0.49
CCDC8-201ENST00000307522 TMEM190Q8WZ59 177 aa11.97□□□□□ -0.49
CCDC8-201ENST00000307522 TRAV12-2A0A075B6T6 113 aa11.96□□□□□ -0.49
CCDC8-201ENST00000307522 POLR2KP53803 58 aaKnown RBP11.96□□□□□ -0.49
CCDC8-201ENST00000307522 VCYO14598 125 aa11.96□□□□□ -0.49
CCDC8-201ENST00000307522 C5orf47Q569G3 176 aa11.96□□□□□ -0.49
CCDC8-201ENST00000307522 Q96MF0 132 aa11.96□□□□□ -0.49
CCDC8-201ENST00000307522 KLK9Q9UKQ9 250 aa11.96□□□□□ -0.49
CCDC8-201ENST00000307522 TEP1Q99973 2627 aaKnown RBP11.96□□□□□ -0.5
CCDC8-201ENST00000307522 B4DSR2 109 aa11.96□□□□□ -0.5
CCDC8-201ENST00000307522 KHDC1LQ5JSQ8 128 aa11.96□□□□□ -0.5
CCDC8-201ENST00000307522 FAM110DQ8TAY7 271 aaPredicted RBP11.96□□□□□ -0.5
CCDC8-201ENST00000307522 DSCR8Q96T75 97 aa11.96□□□□□ -0.5
CCDC8-201ENST00000307522 TIMM21Q9BVV7 248 aa11.96□□□□□ -0.5
CCDC8-201ENST00000307522 SETXQ7Z333 2677 aaKnown RBP11.95□□□□□ -0.5
CCDC8-201ENST00000307522 HOXD3P31249 432 aaPredicted RBP11.95□□□□□ -0.5
CCDC8-201ENST00000307522 NDUFA12Q9UI09 145 aa11.95□□□□□ -0.5
CCDC8-201ENST00000307522 GAGE2AQ6NT46 116 aa11.94□□□□□ -0.5
CCDC8-201ENST00000307522 TRBV7-7A0A0K0K1E9 115 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms