RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 IGHV4-38-2P0DP08 117 aa10.82□□□□□ -0.68
COL6A2-201ENST00000300527 NSUN5P1Q3KNT7 163 aa10.82□□□□□ -0.68
COL6A2-201ENST00000300527 C10orf99Q6UWK7 81 aa10.82□□□□□ -0.68
COL6A2-201ENST00000300527 LMO4P61968 165 aa10.81□□□□□ -0.68
COL6A2-201ENST00000300527 DGAT2L7PQ6IED9 249 aa10.81□□□□□ -0.68
COL6A2-201ENST00000300527 TRBV6-5A0A0K0K1A5 114 aa10.81□□□□□ -0.68
COL6A2-201ENST00000300527 SNRPD3P62318 126 aaKnown RBP10.8□□□□□ -0.68
COL6A2-201ENST00000300527 IGHV1-58A0A0C4DH39 117 aa10.79□□□□□ -0.68
COL6A2-201ENST00000300527 SYNJ2BPP57105 145 aa10.79□□□□□ -0.68
COL6A2-201ENST00000300527 POM121L12Q8N7R1 296 aa10.79□□□□□ -0.68
COL6A2-201ENST00000300527 MIAQ16674 131 aa10.79□□□□□ -0.68
COL6A2-201ENST00000300527 USMG5Q96IX5 58 aa10.79□□□□□ -0.68
COL6A2-201ENST00000300527 LITAFQ99732 161 aa10.79□□□□□ -0.68
COL6A2-201ENST00000300527 CHD8Q9HCK8 2581 aa10.79□□□□□ -0.68
COL6A2-201ENST00000300527 C9orf85Q96MD7 179 aa10.78□□□□□ -0.68
COL6A2-201ENST00000300527 DCANP1Q8TF63 244 aa10.78□□□□□ -0.68
COL6A2-201ENST00000300527 APRG1Q8IVJ8 170 aa10.78□□□□□ -0.68
COL6A2-201ENST00000300527 H3BT86 120 aa10.77□□□□□ -0.68
COL6A2-201ENST00000300527 TMEM61Q8N0U2 210 aa10.77□□□□□ -0.68
COL6A2-201ENST00000300527 TMEM101Q96IK0 257 aa10.77□□□□□ -0.68
COL6A2-201ENST00000300527 CDKN2A-AS1Q9UH64 79 aa10.77□□□□□ -0.68
COL6A2-201ENST00000300527 USP9YO00507 2555 aaPredicted RBP10.77□□□□□ -0.69
COL6A2-201ENST00000300527 LST1O00453 97 aa10.77□□□□□ -0.69
COL6A2-201ENST00000300527 VSIG2Q96IQ7 327 aa10.77□□□□□ -0.69
COL6A2-201ENST00000300527 A0A0J9YX75 114 aa10.76□□□□□ -0.69
COL6A2-201ENST00000300527 HOXD3P31249 432 aaPredicted RBP10.76□□□□□ -0.69
COL6A2-201ENST00000300527 C9orf153Q5TBE3 101 aa10.75□□□□□ -0.69
COL6A2-201ENST00000300527 Q6Q795 121 aa10.75□□□□□ -0.69
COL6A2-201ENST00000300527 Q9H8V8 135 aa10.75□□□□□ -0.69
COL6A2-201ENST00000300527 WNK1Q9H4A3 2382 aa10.75□□□□□ -0.69
COL6A2-201ENST00000300527 FBXL19-AS1Q494R0 122 aa10.75□□□□□ -0.69
COL6A2-201ENST00000300527 IGHV3OR16-12A0A075B7B8 117 aa10.75□□□□□ -0.69
COL6A2-201ENST00000300527 LINC00467Q9BRT7 94 aa10.75□□□□□ -0.69
COL6A2-201ENST00000300527 TRAV13-1A0A0B4J241 112 aa10.74□□□□□ -0.69
COL6A2-201ENST00000300527 CRYBG3Q68DQ2 2970 aa10.74□□□□□ -0.69
COL6A2-201ENST00000300527 K7ENP7 123 aa10.74□□□□□ -0.69
COL6A2-201ENST00000300527 M0QXV9 152 aa10.74□□□□□ -0.69
COL6A2-201ENST00000300527 YAE1D1Q9NRH1 226 aa10.74□□□□□ -0.69
COL6A2-201ENST00000300527 CIRBPQ14011 172 aaKnown RBP10.74□□□□□ -0.69
COL6A2-201ENST00000300527 Q6ZSN1 163 aa10.74□□□□□ -0.69
COL6A2-201ENST00000300527 FAM110AQ9BQ89 295 aa10.74□□□□□ -0.69
COL6A2-201ENST00000300527 KLK5Q9Y337 293 aaPredicted RBP10.74□□□□□ -0.69
COL6A2-201ENST00000300527 MRPS36P82909 103 aaKnown RBP10.73□□□□□ -0.69
COL6A2-201ENST00000300527 GAGE2AQ6NT46 116 aa10.73□□□□□ -0.69
COL6A2-201ENST00000300527 IGHV4-61A0A0C4DH41 118 aa10.73□□□□□ -0.69
COL6A2-201ENST00000300527 NDUFA7O95182 113 aa10.73□□□□□ -0.69
COL6A2-201ENST00000300527 MRPL23Q16540 153 aaKnown RBP10.73□□□□□ -0.69
COL6A2-201ENST00000300527 C19orf54Q5BKX5 351 aa10.73□□□□□ -0.69
COL6A2-201ENST00000300527 PPDPFQ9H3Y8 114 aa10.73□□□□□ -0.69
COL6A2-201ENST00000300527 IGKV3OR2-268A0A0C4DH90 116 aa10.72□□□□□ -0.69
COL6A2-201ENST00000300527 IGHG2P01859 326 aa10.72□□□□□ -0.69
COL6A2-201ENST00000300527 Q9HAA7 133 aa10.72□□□□□ -0.69
COL6A2-201ENST00000300527 MYO9AB2RTY4 2548 aa10.72□□□□□ -0.69
COL6A2-201ENST00000300527 KLRB1Q12918 225 aa10.72□□□□□ -0.69
COL6A2-201ENST00000300527 KLK9Q2XQG4 91 aa10.72□□□□□ -0.69
COL6A2-201ENST00000300527 HIST2H2BDQ6DRA6 164 aa10.72□□□□□ -0.69
COL6A2-201ENST00000300527 ABCA2Q9BZC7 2435 aa10.72□□□□□ -0.69
COL6A2-201ENST00000300527 DEFB131AP59861 70 aa10.71□□□□□ -0.69
COL6A2-201ENST00000300527 SPANXDQ9BXN6 97 aa10.71□□□□□ -0.69
COL6A2-201ENST00000300527 SPANXCQ9NY87 97 aa10.71□□□□□ -0.69
COL6A2-201ENST00000300527 Q8N2B8 174 aa10.71□□□□□ -0.69
COL6A2-201ENST00000300527 RBMY1A1P0DJD3 496 aaKnown RBP10.71□□□□□ -0.7
COL6A2-201ENST00000300527 RBMY1CP0DJD4 496 aa10.71□□□□□ -0.7
COL6A2-201ENST00000300527 DAZ2Q13117 558 aaKnown RBP10.71□□□□□ -0.7
COL6A2-201ENST00000300527 RBMY1FQ15415 496 aaKnown RBP10.71□□□□□ -0.7
COL6A2-201ENST00000300527 DAZ4Q86SG3 579 aaKnown RBP10.71□□□□□ -0.7
COL6A2-201ENST00000300527 DAZ3Q9NR90 486 aaKnown RBP10.71□□□□□ -0.7
COL6A2-201ENST00000300527 SETD2Q9BYW2 2564 aaPredicted RBP10.71□□□□□ -0.7
COL6A2-201ENST00000300527 PRIMA1Q86XR5 153 aa10.7□□□□□ -0.7
COL6A2-201ENST00000300527 IGHV3-53P01767 116 aa10.7□□□□□ -0.7
COL6A2-201ENST00000300527 BAALC-AS2P0C853 105 aa10.7□□□□□ -0.7
COL6A2-201ENST00000300527 FAM104AQ969W3 186 aa10.7□□□□□ -0.7
COL6A2-201ENST00000300527 COX6A2Q02221 97 aa10.7□□□□□ -0.7
COL6A2-201ENST00000300527 CITED2Q99967 270 aaPredicted RBP10.7□□□□□ -0.7
COL6A2-201ENST00000300527 VPS13CQ709C8 3753 aa10.69□□□□□ -0.7
COL6A2-201ENST00000300527 KHDC1LQ5JSQ8 128 aa10.69□□□□□ -0.7
COL6A2-201ENST00000300527 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.69□□□□□ -0.7
COL6A2-201ENST00000300527 SMCR5Q8TEV8 140 aa10.69□□□□□ -0.7
COL6A2-201ENST00000300527 LINC01587Q99440 93 aa10.69□□□□□ -0.7
COL6A2-201ENST00000300527 POLQO75417 2590 aa10.69□□□□□ -0.7
COL6A2-201ENST00000300527 TINCRA0A1B0GVN0 87 aa10.68□□□□□ -0.7
COL6A2-201ENST00000300527 DEFB136Q30KP8 78 aa10.68□□□□□ -0.7
COL6A2-201ENST00000300527 PIK3CD-AS1Q5SR53 167 aa10.68□□□□□ -0.7
COL6A2-201ENST00000300527 LINC00308Q8TCZ7 52 aa10.68□□□□□ -0.7
COL6A2-201ENST00000300527 EDA2RQ9HAV5 297 aa10.68□□□□□ -0.7
COL6A2-201ENST00000300527 UBE2D4Q9Y2X8 147 aa10.68□□□□□ -0.7
COL6A2-201ENST00000300527 LOC107984640A0A0U1RRK4 108 aa10.68□□□□□ -0.7
COL6A2-201ENST00000300527 LINC00694P0DN24 101 aa10.68□□□□□ -0.7
COL6A2-201ENST00000300527 USP9XQ93008 2570 aaPredicted RBP10.68□□□□□ -0.7
COL6A2-201ENST00000300527 TOMM7Q9P0U1 55 aa10.68□□□□□ -0.7
COL6A2-201ENST00000300527 SPTBN4Q9H254 2564 aa10.68□□□□□ -0.7
COL6A2-201ENST00000300527 K7EQG2 157 aa10.67□□□□□ -0.7
COL6A2-201ENST00000300527 CFHR3Q02985 330 aa10.67□□□□□ -0.7
COL6A2-201ENST00000300527 CHCHD7Q9BUK0 85 aa10.67□□□□□ -0.7
COL6A2-201ENST00000300527 A6NDX4 124 aa10.67□□□□□ -0.7
COL6A2-201ENST00000300527 PYGO1Q9Y3Y4 419 aa10.67□□□□□ -0.7
COL6A2-201ENST00000300527 PTPN13Q12923 2485 aa10.66□□□□□ -0.7
COL6A2-201ENST00000300527 IGHV4-59P01825 116 aa10.66□□□□□ -0.7
COL6A2-201ENST00000300527 LY6DQ14210 128 aa10.66□□□□□ -0.7
COL6A2-201ENST00000300527 C19orf84I3L1E1 186 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms