RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 C10orf105Q8TEF2 133 aa11.6□□□□□ -0.55
UBAP1-201ENST00000297661 BEX4Q9NWD9 120 aaPredicted RBP11.6□□□□□ -0.55
UBAP1-201ENST00000297661 TNFRSF18Q9Y5U5 241 aa11.6□□□□□ -0.55
UBAP1-201ENST00000297661 TRAV2A0A0B4J234 112 aa11.6□□□□□ -0.55
UBAP1-201ENST00000297661 OVOL1O14753 267 aa11.6□□□□□ -0.55
UBAP1-201ENST00000297661 IGHG2P01859 326 aa11.6□□□□□ -0.55
UBAP1-201ENST00000297661 RPL39P62891 51 aaKnown RBP11.6□□□□□ -0.55
UBAP1-201ENST00000297661 MXRA5Q9NR99 2828 aa11.6□□□□□ -0.55
UBAP1-201ENST00000297661 F8P00451 2351 aa11.59□□□□□ -0.55
UBAP1-201ENST00000297661 RNASE3P12724 160 aaKnown RBP11.59□□□□□ -0.55
UBAP1-201ENST00000297661 Q96MF0 132 aa11.59□□□□□ -0.55
UBAP1-201ENST00000297661 A0A0B4J2C4 111 aa11.59□□□□□ -0.55
UBAP1-201ENST00000297661 A6NDX4 124 aa11.59□□□□□ -0.55
UBAP1-201ENST00000297661 H3BMM0 161 aa11.59□□□□□ -0.55
UBAP1-201ENST00000297661 UBE2WQ96B02 151 aa11.59□□□□□ -0.55
UBAP1-201ENST00000297661 SPANXA1Q9NS26 97 aa11.59□□□□□ -0.55
UBAP1-201ENST00000297661 TRBV10-2A0A0K0K1G8 114 aa11.59□□□□□ -0.55
UBAP1-201ENST00000297661 MUSTN1Q8IVN3 82 aa11.59□□□□□ -0.55
UBAP1-201ENST00000297661 MDFICQ9P1T7 246 aa11.59□□□□□ -0.55
UBAP1-201ENST00000297661 A0A087WWL8 130 aa11.58□□□□□ -0.56
UBAP1-201ENST00000297661 LGALS9O00182 355 aa11.58□□□□□ -0.56
UBAP1-201ENST00000297661 KRTAP1-3Q8IUG1 177 aa11.58□□□□□ -0.56
UBAP1-201ENST00000297661 PPP1R17O96001 155 aa11.57□□□□□ -0.56
UBAP1-201ENST00000297661 C3orf56Q8N813 242 aa11.57□□□□□ -0.56
UBAP1-201ENST00000297661 LENEPQ9Y5L5 61 aa11.57□□□□□ -0.56
UBAP1-201ENST00000297661 TRAV12-3A0A0B4J271 114 aa11.57□□□□□ -0.56
UBAP1-201ENST00000297661 ZNF876PQ49A33 203 aa11.57□□□□□ -0.56
UBAP1-201ENST00000297661 USMG5Q96IX5 58 aa11.57□□□□□ -0.56
UBAP1-201ENST00000297661 LINC01600Q96MT4 127 aa11.57□□□□□ -0.56
UBAP1-201ENST00000297661 TMEM141Q96I45 108 aa11.56□□□□□ -0.56
UBAP1-201ENST00000297661 DAZ1Q9NQZ3 744 aaKnown RBP11.56□□□□□ -0.56
UBAP1-201ENST00000297661 TRAV12-2A0A075B6T6 113 aa11.56□□□□□ -0.56
UBAP1-201ENST00000297661 MSMBP08118 114 aa11.56□□□□□ -0.56
UBAP1-201ENST00000297661 CHCHD5Q9BSY4 110 aa11.56□□□□□ -0.56
UBAP1-201ENST00000297661 C2orf82Q6UX34 121 aa11.55□□□□□ -0.56
UBAP1-201ENST00000297661 FAM19A4Q96LR4 140 aa11.55□□□□□ -0.56
UBAP1-201ENST00000297661 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.55□□□□□ -0.56
UBAP1-201ENST00000297661 TRIAP1O43715 76 aa11.55□□□□□ -0.56
UBAP1-201ENST00000297661 TIMM17AQ99595 171 aa11.55□□□□□ -0.56
UBAP1-201ENST00000297661 IGHV3-64A0A075B6Q5 118 aa11.54□□□□□ -0.56
UBAP1-201ENST00000297661 IGHV4-59P01825 116 aa11.54□□□□□ -0.56
UBAP1-201ENST00000297661 ZNF56Q15929 161 aa11.54□□□□□ -0.56
UBAP1-201ENST00000297661 FAM74A4Q5TZK3 123 aa11.54□□□□□ -0.56
UBAP1-201ENST00000297661 F5H697 171 aa11.54□□□□□ -0.56
UBAP1-201ENST00000297661 IGLV1-40P01703 118 aa11.54□□□□□ -0.56
UBAP1-201ENST00000297661 DUX5Q96PT3 197 aa11.54□□□□□ -0.56
UBAP1-201ENST00000297661 SMR3AQ99954 134 aa11.54□□□□□ -0.56
UBAP1-201ENST00000297661 TRBV30A0A0K0K1B3 111 aa11.53□□□□□ -0.56
UBAP1-201ENST00000297661 LEPROTO15243 131 aa11.53□□□□□ -0.56
UBAP1-201ENST00000297661 POLR2KP53803 58 aaKnown RBP11.53□□□□□ -0.56
UBAP1-201ENST00000297661 VPREB3Q9UKI3 123 aa11.53□□□□□ -0.56
UBAP1-201ENST00000297661 CR1P17927 2039 aa11.52□□□□□ -0.56
UBAP1-201ENST00000297661 H7C423 109 aa11.52□□□□□ -0.57
UBAP1-201ENST00000297661 MRPL23Q16540 153 aaKnown RBP11.52□□□□□ -0.57
UBAP1-201ENST00000297661 PPDPFQ9H3Y8 114 aa11.52□□□□□ -0.57
UBAP1-201ENST00000297661 TMEM223A0PJW6 202 aa11.51□□□□□ -0.57
UBAP1-201ENST00000297661 LINC00315P59091 139 aa11.51□□□□□ -0.57
UBAP1-201ENST00000297661 DUX3Q96PT4 197 aa11.51□□□□□ -0.57
UBAP1-201ENST00000297661 IGHV4OR15-8A0A075B7B6 117 aa11.51□□□□□ -0.57
UBAP1-201ENST00000297661 A0A087WW49 117 aa11.51□□□□□ -0.57
UBAP1-201ENST00000297661 VCYO14598 125 aa11.51□□□□□ -0.57
UBAP1-201ENST00000297661 SUMO4Q6EEV6 95 aa11.51□□□□□ -0.57
UBAP1-201ENST00000297661 DCANP1Q8TF63 244 aa11.51□□□□□ -0.57
UBAP1-201ENST00000297661 LINC01587Q99440 93 aa11.51□□□□□ -0.57
UBAP1-201ENST00000297661 OPRPNQ99935 248 aaPredicted RBP11.51□□□□□ -0.57
UBAP1-201ENST00000297661 TMEM126AQ9H061 195 aa11.51□□□□□ -0.57
UBAP1-201ENST00000297661 DEFB112Q30KQ8 113 aa11.51□□□□□ -0.57
UBAP1-201ENST00000297661 POM121L12Q8N7R1 296 aa11.51□□□□□ -0.57
UBAP1-201ENST00000297661 H3BUA1 57 aa11.5□□□□□ -0.57
UBAP1-201ENST00000297661 KIF25-AS1Q9Y6Z4 181 aa11.5□□□□□ -0.57
UBAP1-201ENST00000297661 SDHAF1A6NFY7 115 aa11.5□□□□□ -0.57
UBAP1-201ENST00000297661 KLLNB2CW77 178 aa11.5□□□□□ -0.57
UBAP1-201ENST00000297661 M0R2P5 195 aa11.5□□□□□ -0.57
UBAP1-201ENST00000297661 MED14OSP0DP75 135 aa11.5□□□□□ -0.57
UBAP1-201ENST00000297661 CFHR3Q02985 330 aa11.5□□□□□ -0.57
UBAP1-201ENST00000297661 ZNF256Q9Y2P7 627 aaPredicted RBP11.49□□□□□ -0.57
UBAP1-201ENST00000297661 APRG1Q8IVJ8 170 aa11.49□□□□□ -0.57
UBAP1-201ENST00000297661 YAE1D1Q9NRH1 226 aa11.49□□□□□ -0.57
UBAP1-201ENST00000297661 ZNF580Q9UK33 172 aa11.49□□□□□ -0.57
UBAP1-201ENST00000297661 FAM240AA0A1B0GVK7 77 aa11.48□□□□□ -0.57
UBAP1-201ENST00000297661 H3BT86 120 aa11.48□□□□□ -0.57
UBAP1-201ENST00000297661 SPINK13Q1W4C9 94 aa11.48□□□□□ -0.57
UBAP1-201ENST00000297661 ICOSQ9Y6W8 199 aa11.48□□□□□ -0.57
UBAP1-201ENST00000297661 A0A0J9YXY3 114 aa11.48□□□□□ -0.57
UBAP1-201ENST00000297661 TRBV7-7A0A0K0K1E9 115 aa11.48□□□□□ -0.57
UBAP1-201ENST00000297661 SYNJ2BPP57105 145 aa11.48□□□□□ -0.57
UBAP1-201ENST00000297661 LRRC75A-AS1Q8N1F1 130 aa11.48□□□□□ -0.57
UBAP1-201ENST00000297661 HTN1P15515 57 aa11.47□□□□□ -0.57
UBAP1-201ENST00000297661 ZNF22P17026 224 aaPredicted RBP11.47□□□□□ -0.57
UBAP1-201ENST00000297661 HIST2H2BDQ6DRA6 164 aa11.47□□□□□ -0.57
UBAP1-201ENST00000297661 ADARB2-AS1A8MUL3 147 aa11.47□□□□□ -0.57
UBAP1-201ENST00000297661 B4DSR2 109 aa11.47□□□□□ -0.57
UBAP1-201ENST00000297661 PRSS2P07478 247 aa11.47□□□□□ -0.57
UBAP1-201ENST00000297661 PSMB8P28062 276 aa11.47□□□□□ -0.57
UBAP1-201ENST00000297661 ID1P41134 155 aa11.47□□□□□ -0.57
UBAP1-201ENST00000297661 NIPBLQ6KC79 2804 aaeCLIP11.47□□□□□ -0.57
UBAP1-201ENST00000297661 CLEC2BQ92478 149 aa11.46□□□□□ -0.57
UBAP1-201ENST00000297661 A0A0J9YX75 114 aa11.45□□□□□ -0.58
UBAP1-201ENST00000297661 TRBV27A0A0K0K1C4 114 aa11.45□□□□□ -0.58
UBAP1-201ENST00000297661 FAM236AA0A1B0GUQ0 79 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms