RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 ODF1Q14990 250 aa16.17■□□□□ 0.18
PTX3-201ENST00000295927 C20orf203Q8NBC4 194 aa16.17■□□□□ 0.18
PTX3-201ENST00000295927 ZMAT4Q9H898 229 aa16.17■□□□□ 0.18
PTX3-201ENST00000295927 IGIPA6NJ69 53 aa16.16■□□□□ 0.18
PTX3-201ENST00000295927 GAGE12JA6NER3 117 aa16.15■□□□□ 0.18
PTX3-201ENST00000295927 GAGE1Q13065 139 aa16.15■□□□□ 0.18
PTX3-201ENST00000295927 GAGE4Q13068 117 aa16.15■□□□□ 0.18
PTX3-201ENST00000295927 GAGE5Q13069 117 aa16.15■□□□□ 0.18
PTX3-201ENST00000295927 GAGE13Q4V321 117 aa16.15■□□□□ 0.18
PTX3-201ENST00000295927 hDV102S1A0JD36 115 aa16.15■□□□□ 0.18
PTX3-201ENST00000295927 COTL1Q14019 142 aa16.15■□□□□ 0.18
PTX3-201ENST00000295927 LOC100131303A0A0U1RQF7 123 aa16.14■□□□□ 0.17
PTX3-201ENST00000295927 UBE2D3P61077 147 aa16.14■□□□□ 0.17
PTX3-201ENST00000295927 UBE2D2P62837 147 aa16.14■□□□□ 0.17
PTX3-201ENST00000295927 BAALCQ8WXS3 180 aa16.14■□□□□ 0.17
PTX3-201ENST00000295927 RETNQ9HD89 108 aa16.14■□□□□ 0.17
PTX3-201ENST00000295927 TIMM17AQ99595 171 aa16.13■□□□□ 0.17
PTX3-201ENST00000295927 CELA1Q9UNI1 258 aa16.13■□□□□ 0.17
PTX3-201ENST00000295927 A0A087WX48 190 aa16.13■□□□□ 0.17
PTX3-201ENST00000295927 TRAV12-1A0A0B4J245 112 aa16.13■□□□□ 0.17
PTX3-201ENST00000295927 TMEM141Q96I45 108 aa16.13■□□□□ 0.17
PTX3-201ENST00000295927 CHCHD7Q9BUK0 85 aa16.13■□□□□ 0.17
PTX3-201ENST00000295927 NOTCH1P46531 2555 aa16.12■□□□□ 0.17
PTX3-201ENST00000295927 PRB2P02812 416 aaPredicted RBP16.12■□□□□ 0.17
PTX3-201ENST00000295927 PRADC1Q9BSG0 188 aa16.12■□□□□ 0.17
PTX3-201ENST00000295927 HHLA3Q9XRX5 114 aa16.12■□□□□ 0.17
PTX3-201ENST00000295927 DAZ4Q86SG3 579 aaKnown RBP16.11■□□□□ 0.17
PTX3-201ENST00000295927 DAZ3Q9NR90 486 aaKnown RBP16.11■□□□□ 0.17
PTX3-201ENST00000295927 DAD1P61803 113 aa16.11■□□□□ 0.17
PTX3-201ENST00000295927 MRPL35Q9NZE8 188 aaKnown RBP16.11■□□□□ 0.17
PTX3-201ENST00000295927 HSBP1L1C9JCN9 74 aa16.1■□□□□ 0.17
PTX3-201ENST00000295927 SPART-AS1P0CW21 52 aa16.1■□□□□ 0.17
PTX3-201ENST00000295927 DDTP30046 118 aa16.09■□□□□ 0.17
PTX3-201ENST00000295927 LINC00587B1AMM8 73 aa16.09■□□□□ 0.17
PTX3-201ENST00000295927 PRSS29PA6NIE9 313 aa16.08■□□□□ 0.16
PTX3-201ENST00000295927 DPM2O94777 84 aa16.08■□□□□ 0.16
PTX3-201ENST00000295927 IGKCP01834 107 aa16.07■□□□□ 0.16
PTX3-201ENST00000295927 CRYBA4P53673 196 aa16.07■□□□□ 0.16
PTX3-201ENST00000295927 KPRPQ5T749 579 aaPredicted RBP16.07■□□□□ 0.16
PTX3-201ENST00000295927 OPRPNQ99935 248 aaPredicted RBP16.07■□□□□ 0.16
PTX3-201ENST00000295927 CHTOPQ9Y3Y2 248 aaKnown RBP16.07■□□□□ 0.16
PTX3-201ENST00000295927 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.07■□□□□ 0.16
PTX3-201ENST00000295927 IGKV2-29A2NJV5 120 aaPredicted RBP16.07■□□□□ 0.16
PTX3-201ENST00000295927 ZC2HC1BQ5TFG8 222 aa16.07■□□□□ 0.16
PTX3-201ENST00000295927 NTM-AS1Q6ZSK4 140 aa16.07■□□□□ 0.16
PTX3-201ENST00000295927 PRO0255Q9UI72 69 aa16.07■□□□□ 0.16
PTX3-201ENST00000295927 NBEAL1Q6ZS30 2694 aa16.07■□□□□ 0.16
PTX3-201ENST00000295927 F8VRH5 84 aa16.06■□□□□ 0.16
PTX3-201ENST00000295927 IGLC3P0DOY3 106 aa16.06■□□□□ 0.16
PTX3-201ENST00000295927 PYGO1Q9Y3Y4 419 aa16.06■□□□□ 0.16
PTX3-201ENST00000295927 K7EIL1 84 aa16.06■□□□□ 0.16
PTX3-201ENST00000295927 LINC00694P0DN24 101 aa16.06■□□□□ 0.16
PTX3-201ENST00000295927 PMVKQ15126 192 aa16.06■□□□□ 0.16
PTX3-201ENST00000295927 STPG4Q8N801 248 aa16.06■□□□□ 0.16
PTX3-201ENST00000295927 C14orf144Q96I85 54 aa16.05■□□□□ 0.16
PTX3-201ENST00000295927 MIEN1Q9BRT3 115 aa16.05■□□□□ 0.16
PTX3-201ENST00000295927 CST9LQ9H4G1 147 aa16.05■□□□□ 0.16
PTX3-201ENST00000295927 IGLV4-3A0A075B6K6 122 aa16.04■□□□□ 0.16
PTX3-201ENST00000295927 ATP5G1P05496 136 aa16.04■□□□□ 0.16
PTX3-201ENST00000295927 GYPEP15421 78 aa16.04■□□□□ 0.16
PTX3-201ENST00000295927 CEMP1Q6PRD7 247 aaPredicted RBP16.04■□□□□ 0.16
PTX3-201ENST00000295927 SBSPONQ8IVN8 264 aa16.04■□□□□ 0.16
PTX3-201ENST00000295927 UBE2D4Q9Y2X8 147 aa16.04■□□□□ 0.16
PTX3-201ENST00000295927 PLNP26678 52 aa16.03■□□□□ 0.16
PTX3-201ENST00000295927 ANKRD39Q53RE8 183 aa16.03■□□□□ 0.16
PTX3-201ENST00000295927 GTSF1LQ9H1H1 148 aa16.03■□□□□ 0.16
PTX3-201ENST00000295927 TEX48A0A1B0GUV7 120 aa16.02■□□□□ 0.16
PTX3-201ENST00000295927 FAM104AQ969W3 186 aa16.02■□□□□ 0.16
PTX3-201ENST00000295927 MGAM2Q2M2H8 2515 aa16.02■□□□□ 0.15
PTX3-201ENST00000295927 PAX4O43316 350 aa16.02■□□□□ 0.15
PTX3-201ENST00000295927 LURAP1LQ8IV03 231 aa16.02■□□□□ 0.15
PTX3-201ENST00000295927 SPANXA1Q9NS26 97 aa16.02■□□□□ 0.15
PTX3-201ENST00000295927 UQCR10Q9UDW1 63 aa16.01■□□□□ 0.15
PTX3-201ENST00000295927 TCTAP57738 103 aa16■□□□□ 0.15
PTX3-201ENST00000295927 DEFB121Q5J5C9 76 aa16■□□□□ 0.15
PTX3-201ENST00000295927 PAPPA-AS1Q5QFB9 102 aa16■□□□□ 0.15
PTX3-201ENST00000295927 VCX2Q9H322 139 aa16■□□□□ 0.15
PTX3-201ENST00000295927 C11orf68Q9H3H3 251 aaKnown RBP16■□□□□ 0.15
PTX3-201ENST00000295927 IGLV4-69A0A075B6H9 119 aa15.99■□□□□ 0.15
PTX3-201ENST00000295927 NPSP0C0P6 89 aa15.99■□□□□ 0.15
PTX3-201ENST00000295927 VSIG2Q96IQ7 327 aa15.99■□□□□ 0.15
PTX3-201ENST00000295927 F5H768 121 aa15.98■□□□□ 0.15
PTX3-201ENST00000295927 C12orf74Q32Q52 190 aa15.98■□□□□ 0.15
PTX3-201ENST00000295927 A0A0J9YY99 117 aa15.98■□□□□ 0.15
PTX3-201ENST00000295927 HTN3P15516 51 aa15.98■□□□□ 0.15
PTX3-201ENST00000295927 TIMM21Q9BVV7 248 aa15.98■□□□□ 0.15
PTX3-201ENST00000295927 ATP6V0E2Q8NHE4 81 aa15.97■□□□□ 0.15
PTX3-201ENST00000295927 AMELXQ99217 191 aa15.97■□□□□ 0.15
PTX3-201ENST00000295927 TMEM243Q9BU79 118 aa15.97■□□□□ 0.15
PTX3-201ENST00000295927 TRBV25-1A0A075B6N4 114 aa15.96■□□□□ 0.15
PTX3-201ENST00000295927 TRAV26-1A0A087WT03 109 aa15.96■□□□□ 0.14
PTX3-201ENST00000295927 RNASE13Q5GAN3 156 aaKnown RBP15.96■□□□□ 0.14
PTX3-201ENST00000295927 Q6ZUT4 128 aa15.96■□□□□ 0.14
PTX3-201ENST00000295927 TRBV6-8A0A0A6YYG3 113 aa15.95■□□□□ 0.14
PTX3-201ENST00000295927 C11orf86A6NJI1 115 aa15.95■□□□□ 0.14
PTX3-201ENST00000295927 FGF6P10767 208 aa15.95■□□□□ 0.14
PTX3-201ENST00000295927 TP73-AS1Q9UF72 201 aa15.95■□□□□ 0.14
PTX3-201ENST00000295927 TENM3Q9P273 2699 aa15.95■□□□□ 0.14
PTX3-201ENST00000295927 A0A0J9YWU9 116 aa15.94■□□□□ 0.14
PTX3-201ENST00000295927 DGAT2L7PQ6IED9 249 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms