RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 CEMP1Q6PRD7 247 aaPredicted RBP13.92□□□□□ -0.18
BRAF-201ENST00000288602 ZNRF2Q8NHG8 242 aa13.92□□□□□ -0.18
BRAF-201ENST00000288602 PRADC1Q9BSG0 188 aa13.92□□□□□ -0.18
BRAF-201ENST00000288602 HIVEP1P15822 2718 aa13.92□□□□□ -0.18
BRAF-201ENST00000288602 PHLDA1Q8WV24 401 aaPredicted RBP13.92□□□□□ -0.18
BRAF-201ENST00000288602 C19orf73Q9NVV2 129 aa13.92□□□□□ -0.18
BRAF-201ENST00000288602 HIGD1BQ9P298 99 aa13.92□□□□□ -0.18
BRAF-201ENST00000288602 BEAN1Q3B7T3 259 aa13.91□□□□□ -0.18
BRAF-201ENST00000288602 EDA2RQ9HAV5 297 aa13.91□□□□□ -0.18
BRAF-201ENST00000288602 LINC01549A6NIU2 74 aa13.9□□□□□ -0.18
BRAF-201ENST00000288602 IGHV3-53P01767 116 aa13.9□□□□□ -0.18
BRAF-201ENST00000288602 A6NDN8 102 aa13.9□□□□□ -0.18
BRAF-201ENST00000288602 E9PLD3 99 aa13.9□□□□□ -0.18
BRAF-201ENST00000288602 PIK3CD-AS1Q5SR53 167 aa13.9□□□□□ -0.18
BRAF-201ENST00000288602 TMEM170BQ5T4T1 132 aa13.9□□□□□ -0.18
BRAF-201ENST00000288602 Q6ZTI0 123 aa13.9□□□□□ -0.18
BRAF-201ENST00000288602 PTH2Q96A98 100 aa13.9□□□□□ -0.18
BRAF-201ENST00000288602 TENM1Q9UKZ4 2725 aa13.9□□□□□ -0.18
BRAF-201ENST00000288602 MYMXA0A1B0GTQ4 84 aa13.89□□□□□ -0.19
BRAF-201ENST00000288602 RS1O15537 224 aa13.89□□□□□ -0.19
BRAF-201ENST00000288602 PF4P02776 101 aa13.89□□□□□ -0.19
BRAF-201ENST00000288602 ZNF479Q96JC4 524 aa13.89□□□□□ -0.19
BRAF-201ENST00000288602 RNASE13Q5GAN3 156 aaKnown RBP13.89□□□□□ -0.19
BRAF-201ENST00000288602 H3BUT2 72 aa13.88□□□□□ -0.19
BRAF-201ENST00000288602 C9orf118A6NHY6 69 aa13.88□□□□□ -0.19
BRAF-201ENST00000288602 SPATA3Q8NHX4 192 aa13.88□□□□□ -0.19
BRAF-201ENST00000288602 NOP10Q9NPE3 64 aaKnown RBP13.88□□□□□ -0.19
BRAF-201ENST00000288602 IGLV4-3A0A075B6K6 122 aa13.87□□□□□ -0.19
BRAF-201ENST00000288602 H3BRM9 83 aa13.87□□□□□ -0.19
BRAF-201ENST00000288602 GTF2H5Q6ZYL4 71 aa13.87□□□□□ -0.19
BRAF-201ENST00000288602 IL17DQ8TAD2 202 aa13.87□□□□□ -0.19
BRAF-201ENST00000288602 K7ERJ3 54 aa13.87□□□□□ -0.19
BRAF-201ENST00000288602 RHODO00212 210 aa13.87□□□□□ -0.19
BRAF-201ENST00000288602 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.86□□□□□ -0.19
BRAF-201ENST00000288602 IGKV2-29A2NJV5 120 aaPredicted RBP13.86□□□□□ -0.19
BRAF-201ENST00000288602 ZNF815PA8K554 130 aa13.86□□□□□ -0.19
BRAF-201ENST00000288602 NDUFA11Q86Y39 141 aa13.86□□□□□ -0.19
BRAF-201ENST00000288602 CEND1Q8N111 149 aa13.86□□□□□ -0.19
BRAF-201ENST00000288602 FAM104AQ969W3 186 aa13.86□□□□□ -0.19
BRAF-201ENST00000288602 TMEM263Q8WUH6 116 aaKnown RBP13.86□□□□□ -0.19
BRAF-201ENST00000288602 PLEKHB2Q96CS7 222 aa13.86□□□□□ -0.19
BRAF-201ENST00000288602 HIST1H4GQ99525 98 aa13.85□□□□□ -0.19
BRAF-201ENST00000288602 CHCHD7Q9BUK0 85 aa13.85□□□□□ -0.19
BRAF-201ENST00000288602 VCX2Q9H322 139 aa13.85□□□□□ -0.19
BRAF-201ENST00000288602 A0A0J9YXV3 536 aa13.84□□□□□ -0.19
BRAF-201ENST00000288602 CMC4P56277 68 aaPredicted RBP13.84□□□□□ -0.19
BRAF-201ENST00000288602 TSPEAR-AS2P59090 65 aa13.84□□□□□ -0.19
BRAF-201ENST00000288602 PAPPA-AS1Q5QFB9 102 aa13.84□□□□□ -0.19
BRAF-201ENST00000288602 IGHV3-64A0A075B6Q5 118 aa13.84□□□□□ -0.19
BRAF-201ENST00000288602 K7EP34 96 aa13.84□□□□□ -0.19
BRAF-201ENST00000288602 LINC00482Q8N8I6 264 aa13.84□□□□□ -0.19
BRAF-201ENST00000288602 NHP2Q9NX24 153 aaKnown RBP13.84□□□□□ -0.19
BRAF-201ENST00000288602 TRRAPQ9Y4A5 3859 aa13.83□□□□□ -0.2
BRAF-201ENST00000288602 SCGB1D4Q6XE38 83 aa13.82□□□□□ -0.2
BRAF-201ENST00000288602 CSNK1G2-AS1Q8NCQ2 148 aa13.82□□□□□ -0.2
BRAF-201ENST00000288602 TM2D2Q9BX73 214 aa13.82□□□□□ -0.2
BRAF-201ENST00000288602 PLAC8L1A1L4L8 177 aa13.82□□□□□ -0.2
BRAF-201ENST00000288602 HERVK_113P61574 105 aa13.82□□□□□ -0.2
BRAF-201ENST00000288602 SMIM13P0DJ93 91 aa13.81□□□□□ -0.2
BRAF-201ENST00000288602 FAM110AQ9BQ89 295 aa13.81□□□□□ -0.2
BRAF-201ENST00000288602 NBEAL2Q6ZNJ1 2754 aa13.81□□□□□ -0.2
BRAF-201ENST00000288602 GAGE7O76087 117 aa13.81□□□□□ -0.2
BRAF-201ENST00000288602 GAGE12FP0CL80 117 aa13.81□□□□□ -0.2
BRAF-201ENST00000288602 GAGE12GP0CL81 117 aa13.81□□□□□ -0.2
BRAF-201ENST00000288602 GAGE12IP0CL82 117 aa13.81□□□□□ -0.2
BRAF-201ENST00000288602 NFE4Q86UQ8 179 aa13.81□□□□□ -0.2
BRAF-201ENST00000288602 G3V4G9 280 aa13.8□□□□□ -0.2
BRAF-201ENST00000288602 DNAJC30Q96LL9 226 aa13.8□□□□□ -0.2
BRAF-201ENST00000288602 TRBV7-3A0A075B6L6 115 aa13.8□□□□□ -0.2
BRAF-201ENST00000288602 UBE2D4Q9Y2X8 147 aa13.8□□□□□ -0.2
BRAF-201ENST00000288602 ATRQ13535 2644 aa13.79□□□□□ -0.2
BRAF-201ENST00000288602 PYGO1Q9Y3Y4 419 aa13.79□□□□□ -0.2
BRAF-201ENST00000288602 TMEM238C9JI98 176 aa13.79□□□□□ -0.2
BRAF-201ENST00000288602 ZNF22P17026 224 aaPredicted RBP13.79□□□□□ -0.2
BRAF-201ENST00000288602 SLC25A29Q8N8R3 303 aa13.79□□□□□ -0.2
BRAF-201ENST00000288602 SPCS1Q9Y6A9 102 aa13.79□□□□□ -0.2
BRAF-201ENST00000288602 RRN3P1Q2M238 152 aa13.78□□□□□ -0.2
BRAF-201ENST00000288602 C16orf74Q96GX8 76 aa13.78□□□□□ -0.2
BRAF-201ENST00000288602 AMELXQ99217 191 aa13.78□□□□□ -0.2
BRAF-201ENST00000288602 TRGV2A0A075B6R0 118 aa13.77□□□□□ -0.21
BRAF-201ENST00000288602 TRAV4A0A0B4J268 109 aa13.77□□□□□ -0.21
BRAF-201ENST00000288602 A0A1W2PPM0 123 aa13.77□□□□□ -0.21
BRAF-201ENST00000288602 TMEM223A0PJW6 202 aa13.77□□□□□ -0.21
BRAF-201ENST00000288602 Q6ZUT4 128 aa13.77□□□□□ -0.21
BRAF-201ENST00000288602 C1QTNF4Q9BXJ3 329 aa13.77□□□□□ -0.21
BRAF-201ENST00000288602 GAGE12JA6NER3 117 aa13.76□□□□□ -0.21
BRAF-201ENST00000288602 K7EQD1 137 aa13.76□□□□□ -0.21
BRAF-201ENST00000288602 GAGE4Q13068 117 aa13.76□□□□□ -0.21
BRAF-201ENST00000288602 GAGE5Q13069 117 aa13.76□□□□□ -0.21
BRAF-201ENST00000288602 DAZ2Q13117 558 aaKnown RBP13.76□□□□□ -0.21
BRAF-201ENST00000288602 TAL2Q16559 108 aa13.76□□□□□ -0.21
BRAF-201ENST00000288602 GAGE13Q4V321 117 aa13.76□□□□□ -0.21
BRAF-201ENST00000288602 J3QQQ9 107 aa13.76□□□□□ -0.21
BRAF-201ENST00000288602 SRSF9Q13242 221 aaKnown RBP eCLIP13.75□□□□□ -0.21
BRAF-201ENST00000288602 LOC100131303A0A0U1RQF7 123 aa13.74□□□□□ -0.21
BRAF-201ENST00000288602 OR5A1Q8NGJ0 315 aa13.74□□□□□ -0.21
BRAF-201ENST00000288602 C12orf74Q32Q52 190 aa13.74□□□□□ -0.21
BRAF-201ENST00000288602 TEP1Q99973 2627 aaKnown RBP13.74□□□□□ -0.21
BRAF-201ENST00000288602 A0A0J9YY99 117 aa13.73□□□□□ -0.21
BRAF-201ENST00000288602 LINC00694P0DN24 101 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms