RNA–Protein interactions for RNA: ENST00000287543.4

MALSU1-201, Transcript of mitochondrial assembly of ribosomal large subunit 1, humanhuman

TSL 2

Gene MALSU1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALSU1-201ENST00000287543 AMTP48728 403 aa12.46□□□□□ -0.41
MALSU1-201ENST00000287543 LINC00269Q8N2A0 174 aa12.46□□□□□ -0.41
MALSU1-201ENST00000287543 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.45□□□□□ -0.42
MALSU1-201ENST00000287543 HIGD1CA8MV81 97 aa12.45□□□□□ -0.42
MALSU1-201ENST00000287543 NCR2O95944 276 aa12.45□□□□□ -0.42
MALSU1-201ENST00000287543 TRAV8-4A0A0B4J246 113 aa12.44□□□□□ -0.42
MALSU1-201ENST00000287543 TRAV26-2A0A0B4J265 109 aa12.44□□□□□ -0.42
MALSU1-201ENST00000287543 REG3AQ06141 175 aa12.43□□□□□ -0.42
MALSU1-201ENST00000287543 ISOC2Q96AB3 205 aa12.43□□□□□ -0.42
MALSU1-201ENST00000287543 TMEM191AQ9H0A3 160 aa12.43□□□□□ -0.42
MALSU1-201ENST00000287543 NAT8Q9UHE5 227 aa12.43□□□□□ -0.42
MALSU1-201ENST00000287543 RIGQ13278 110 aa12.42□□□□□ -0.42
MALSU1-201ENST00000287543 V9GYV3 84 aa12.42□□□□□ -0.42
MALSU1-201ENST00000287543 TRBV6-5A0A0K0K1A5 114 aa12.41□□□□□ -0.42
MALSU1-201ENST00000287543 FAM229AH3BQW9 127 aa12.41□□□□□ -0.42
MALSU1-201ENST00000287543 H7C423 109 aa12.41□□□□□ -0.42
MALSU1-201ENST00000287543 RPL23P62829 140 aaKnown RBP12.41□□□□□ -0.42
MALSU1-201ENST00000287543 C20orf203Q8NBC4 194 aa12.41□□□□□ -0.42
MALSU1-201ENST00000287543 SDHAF1A6NFY7 115 aa12.4□□□□□ -0.42
MALSU1-201ENST00000287543 HLA-DQA1P01909 254 aa12.4□□□□□ -0.42
MALSU1-201ENST00000287543 ADIRFQ15847 76 aa12.4□□□□□ -0.42
MALSU1-201ENST00000287543 CLPSL2Q6UWE3 100 aa12.4□□□□□ -0.42
MALSU1-201ENST00000287543 RPL39LQ96EH5 51 aaKnown RBP12.4□□□□□ -0.42
MALSU1-201ENST00000287543 MRAP2Q96G30 205 aa12.4□□□□□ -0.42
MALSU1-201ENST00000287543 NAT8BQ9UHF3 227 aa12.4□□□□□ -0.42
MALSU1-201ENST00000287543 USP17L23D6RBM5 183 aa12.39□□□□□ -0.43
MALSU1-201ENST00000287543 I3L3M4 83 aa12.39□□□□□ -0.43
MALSU1-201ENST00000287543 APCSP02743 223 aa12.39□□□□□ -0.43
MALSU1-201ENST00000287543 PMCHP20382 165 aa12.39□□□□□ -0.43
MALSU1-201ENST00000287543 Q6ZSA8 131 aa12.39□□□□□ -0.43
MALSU1-201ENST00000287543 ST20Q9HBF5 79 aa12.39□□□□□ -0.43
MALSU1-201ENST00000287543 ABCA13Q86UQ4 5058 aa12.39□□□□□ -0.43
MALSU1-201ENST00000287543 IGLV4-60A0A075B6I1 120 aa12.38□□□□□ -0.43
MALSU1-201ENST00000287543 C9JQL5 133 aa12.38□□□□□ -0.43
MALSU1-201ENST00000287543 PPP1R17O96001 155 aa12.38□□□□□ -0.43
MALSU1-201ENST00000287543 Q5VSD8 79 aa12.38□□□□□ -0.43
MALSU1-201ENST00000287543 AMMECR1LQ6DCA0 310 aa12.38□□□□□ -0.43
MALSU1-201ENST00000287543 DGAT2L7PQ6IED9 249 aa12.38□□□□□ -0.43
MALSU1-201ENST00000287543 CLRN3Q8NCR9 226 aa12.38□□□□□ -0.43
MALSU1-201ENST00000287543 NUP35Q8NFH5 326 aa12.38□□□□□ -0.43
MALSU1-201ENST00000287543 FAM30AQ9NZY2 134 aa12.38□□□□□ -0.43
MALSU1-201ENST00000287543 RAB4AP20338 218 aa12.37□□□□□ -0.43
MALSU1-201ENST00000287543 SMR3BP02814 79 aaPredicted RBP12.36□□□□□ -0.43
MALSU1-201ENST00000287543 KRTAP26-1Q6PEX3 210 aa12.36□□□□□ -0.43
MALSU1-201ENST00000287543 DEFB104AQ8WTQ1 72 aa12.36□□□□□ -0.43
MALSU1-201ENST00000287543 A0A1B0GW15 77 aa12.35□□□□□ -0.43
MALSU1-201ENST00000287543 ZNF25P17030 456 aaPredicted RBP12.35□□□□□ -0.43
MALSU1-201ENST00000287543 RAB14P61106 215 aa12.35□□□□□ -0.43
MALSU1-201ENST00000287543 SRSF3P84103 164 aaKnown RBP12.35□□□□□ -0.43
MALSU1-201ENST00000287543 RNF185Q96GF1 192 aa12.35□□□□□ -0.43
MALSU1-201ENST00000287543 IGLV10-54A0A075B6I4 117 aa12.34□□□□□ -0.43
MALSU1-201ENST00000287543 SMIM27A0A1W2PRY6 76 aa12.34□□□□□ -0.43
MALSU1-201ENST00000287543 AMN1Q8IY45 258 aa12.34□□□□□ -0.43
MALSU1-201ENST00000287543 BTF3L4Q96K17 158 aa12.34□□□□□ -0.43
MALSU1-201ENST00000287543 INAFM2P0DMQ5 153 aa12.33□□□□□ -0.44
MALSU1-201ENST00000287543 RNASEKQ6P5S7 137 aaKnown RBP12.33□□□□□ -0.44
MALSU1-201ENST00000287543 TMEM101Q96IK0 257 aa12.33□□□□□ -0.44
MALSU1-201ENST00000287543 TRBV27A0A0K0K1C4 114 aa12.32□□□□□ -0.44
MALSU1-201ENST00000287543 VCYO14598 125 aa12.32□□□□□ -0.44
MALSU1-201ENST00000287543 S100A8P05109 93 aa12.32□□□□□ -0.44
MALSU1-201ENST00000287543 PRSS1P07477 247 aa12.32□□□□□ -0.44
MALSU1-201ENST00000287543 FGF6P10767 208 aa12.32□□□□□ -0.44
MALSU1-201ENST00000287543 POLR2KP53803 58 aaKnown RBP12.32□□□□□ -0.44
MALSU1-201ENST00000287543 HAMPP81172 84 aa12.32□□□□□ -0.44
MALSU1-201ENST00000287543 CFAP161Q6P656 301 aa12.32□□□□□ -0.44
MALSU1-201ENST00000287543 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.31□□□□□ -0.44
MALSU1-201ENST00000287543 IGKV2-29A2NJV5 120 aaPredicted RBP12.31□□□□□ -0.44
MALSU1-201ENST00000287543 LINC01620Q4KN68 170 aa12.31□□□□□ -0.44
MALSU1-201ENST00000287543 CHAC1Q9BUX1 264 aa12.31□□□□□ -0.44
MALSU1-201ENST00000287543 LINC00862A6NCI5 91 aa12.3□□□□□ -0.44
MALSU1-201ENST00000287543 PPP1R2P9O14990 202 aa12.3□□□□□ -0.44
MALSU1-201ENST00000287543 TSHBP01222 138 aa12.3□□□□□ -0.44
MALSU1-201ENST00000287543 ESDP10768 282 aa12.3□□□□□ -0.44
MALSU1-201ENST00000287543 SMAGPQ0VAQ4 97 aa12.3□□□□□ -0.44
MALSU1-201ENST00000287543 C9orf163Q8N9P6 203 aa12.3□□□□□ -0.44
MALSU1-201ENST00000287543 AP5S1Q9NUS5 200 aa12.3□□□□□ -0.44
MALSU1-201ENST00000287543 GAS8-AS1O95177 125 aa12.29□□□□□ -0.44
MALSU1-201ENST00000287543 FAM104BQ5XKR9 115 aa12.29□□□□□ -0.44
MALSU1-201ENST00000287543 TMEM242Q9NWH2 141 aa12.29□□□□□ -0.44
MALSU1-201ENST00000287543 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.28□□□□□ -0.44
MALSU1-201ENST00000287543 hDV102S1A0JD36 115 aa12.28□□□□□ -0.44
MALSU1-201ENST00000287543 F8W036 122 aa12.28□□□□□ -0.44
MALSU1-201ENST00000287543 PLA2G1BP04054 148 aaKnown RBP12.28□□□□□ -0.44
MALSU1-201ENST00000287543 FCER1GP30273 86 aa12.28□□□□□ -0.44
MALSU1-201ENST00000287543 RPS10P46783 165 aaKnown RBP12.28□□□□□ -0.44
MALSU1-201ENST00000287543 CAMPP49913 170 aa12.28□□□□□ -0.44
MALSU1-201ENST00000287543 SUMO2P61956 95 aaKnown RBP12.28□□□□□ -0.44
MALSU1-201ENST00000287543 OR5A1Q8NGJ0 315 aa12.28□□□□□ -0.44
MALSU1-201ENST00000287543 KIR2DL4Q99706 377 aa12.28□□□□□ -0.44
MALSU1-201ENST00000287543 C7orf77A4D0Y5 90 aa12.27□□□□□ -0.45
MALSU1-201ENST00000287543 GAGE12HA6NDE8 117 aa12.27□□□□□ -0.45
MALSU1-201ENST00000287543 CNBPP62633 177 aaKnown RBP12.27□□□□□ -0.45
MALSU1-201ENST00000287543 SCXQ7RTU7 201 aa12.27□□□□□ -0.45
MALSU1-201ENST00000287543 MRPL52Q86TS9 123 aaKnown RBP12.27□□□□□ -0.45
MALSU1-201ENST00000287543 FAT1Q14517 4588 aa12.27□□□□□ -0.45
MALSU1-201ENST00000287543 IGKV3OR2-268A0A0C4DH90 116 aa12.26□□□□□ -0.45
MALSU1-201ENST00000287543 TCAPO15273 167 aa12.26□□□□□ -0.45
MALSU1-201ENST00000287543 PNRC1Q12796 327 aaPredicted RBP12.26□□□□□ -0.45
MALSU1-201ENST00000287543 MRPL51Q4U2R6 128 aaKnown RBP12.26□□□□□ -0.45
MALSU1-201ENST00000287543 NRACQ8N912 160 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms