RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 RNF152Q8N8N0 203 aa9.68□□□□□ -0.86
SLC28A1-201ENST00000286749 ZANQ9Y493 2812 aa9.67□□□□□ -0.86
SLC28A1-201ENST00000286749 GATA3P23771 443 aa9.67□□□□□ -0.86
SLC28A1-201ENST00000286749 DEFB131AP59861 70 aa9.67□□□□□ -0.86
SLC28A1-201ENST00000286749 DUX3Q96PT4 197 aa9.67□□□□□ -0.86
SLC28A1-201ENST00000286749 EDA2RQ9HAV5 297 aa9.67□□□□□ -0.86
SLC28A1-201ENST00000286749 A8MZ25 164 aa9.66□□□□□ -0.86
SLC28A1-201ENST00000286749 ATXN8Q156A1 80 aa9.66□□□□□ -0.86
SLC28A1-201ENST00000286749 ADAMTSL4-AS1Q5T5F5 129 aa9.66□□□□□ -0.86
SLC28A1-201ENST00000286749 Q6ZSN1 163 aa9.66□□□□□ -0.86
SLC28A1-201ENST00000286749 USP9XQ93008 2570 aaPredicted RBP9.66□□□□□ -0.86
SLC28A1-201ENST00000286749 IGHV1-58A0A0C4DH39 117 aa9.66□□□□□ -0.86
SLC28A1-201ENST00000286749 RBMY1BA6NDE4 496 aaKnown RBP9.66□□□□□ -0.86
SLC28A1-201ENST00000286749 RBMY1EA6NEQ0 496 aaKnown RBP9.66□□□□□ -0.86
SLC28A1-201ENST00000286749 M0QXV9 152 aa9.66□□□□□ -0.86
SLC28A1-201ENST00000286749 TRIAP1O43715 76 aa9.66□□□□□ -0.86
SLC28A1-201ENST00000286749 RBMY1DP0C7P1 496 aaKnown RBP9.66□□□□□ -0.86
SLC28A1-201ENST00000286749 LINC01620Q4KN68 170 aa9.66□□□□□ -0.86
SLC28A1-201ENST00000286749 MAPK1IP1LQ8NDC0 245 aa9.66□□□□□ -0.86
SLC28A1-201ENST00000286749 NDUFA12Q9UI09 145 aa9.66□□□□□ -0.86
SLC28A1-201ENST00000286749 NPC2P61916 151 aa9.65□□□□□ -0.86
SLC28A1-201ENST00000286749 DEFB136Q30KP8 78 aa9.65□□□□□ -0.86
SLC28A1-201ENST00000286749 NTN5Q8WTR8 489 aaPredicted RBP9.65□□□□□ -0.86
SLC28A1-201ENST00000286749 DOPEY1Q5JWR5 2465 aa9.65□□□□□ -0.86
SLC28A1-201ENST00000286749 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.65□□□□□ -0.87
SLC28A1-201ENST00000286749 IGKV2-29A2NJV5 120 aaPredicted RBP9.65□□□□□ -0.87
SLC28A1-201ENST00000286749 TMEM262E9PQX1 116 aa9.65□□□□□ -0.87
SLC28A1-201ENST00000286749 SLURP1P55000 103 aa9.65□□□□□ -0.87
SLC28A1-201ENST00000286749 LINC01356Q8N9X3 169 aa9.65□□□□□ -0.87
SLC28A1-201ENST00000286749 CHCHD7Q9BUK0 85 aa9.65□□□□□ -0.87
SLC28A1-201ENST00000286749 USP9YO00507 2555 aaPredicted RBP9.64□□□□□ -0.87
SLC28A1-201ENST00000286749 ANKRD17O75179 2603 aaKnown RBP9.64□□□□□ -0.87
SLC28A1-201ENST00000286749 C18orf65Q6ZTR6 163 aa9.64□□□□□ -0.87
SLC28A1-201ENST00000286749 VSIG2Q96IQ7 327 aa9.64□□□□□ -0.87
SLC28A1-201ENST00000286749 UBE2E2Q96LR5 201 aa9.64□□□□□ -0.87
SLC28A1-201ENST00000286749 TRAV26-1A0A087WT03 109 aa9.64□□□□□ -0.87
SLC28A1-201ENST00000286749 TRBV30A0A0K0K1B3 111 aa9.64□□□□□ -0.87
SLC28A1-201ENST00000286749 H3BMM0 161 aa9.64□□□□□ -0.87
SLC28A1-201ENST00000286749 ZNF702PQ9H963 129 aa9.64□□□□□ -0.87
SLC28A1-201ENST00000286749 VPREB3Q9UKI3 123 aa9.64□□□□□ -0.87
SLC28A1-201ENST00000286749 UBE2D4Q9Y2X8 147 aa9.64□□□□□ -0.87
SLC28A1-201ENST00000286749 TINCRA0A1B0GVN0 87 aa9.63□□□□□ -0.87
SLC28A1-201ENST00000286749 IGHV3-38A0A0C4DH36 116 aa9.63□□□□□ -0.87
SLC28A1-201ENST00000286749 Q6ZSV7 163 aa9.63□□□□□ -0.87
SLC28A1-201ENST00000286749 LINC00467Q9BRT7 94 aa9.63□□□□□ -0.87
SLC28A1-201ENST00000286749 SPANXDQ9BXN6 97 aa9.63□□□□□ -0.87
SLC28A1-201ENST00000286749 SPANXCQ9NY87 97 aa9.63□□□□□ -0.87
SLC28A1-201ENST00000286749 CSMD2Q7Z408 3487 aa9.63□□□□□ -0.87
SLC28A1-201ENST00000286749 MXRA5Q9NR99 2828 aa9.62□□□□□ -0.87
SLC28A1-201ENST00000286749 ZNF415Q09FC8 603 aa9.62□□□□□ -0.87
SLC28A1-201ENST00000286749 MIAQ16674 131 aa9.62□□□□□ -0.87
SLC28A1-201ENST00000286749 Q5PR19 223 aa9.62□□□□□ -0.87
SLC28A1-201ENST00000286749 SPANXA1Q9NS26 97 aa9.62□□□□□ -0.87
SLC28A1-201ENST00000286749 ICOSQ9Y6W8 199 aa9.62□□□□□ -0.87
SLC28A1-201ENST00000286749 TEX49A0A1B0GTD5 131 aa9.61□□□□□ -0.87
SLC28A1-201ENST00000286749 DSCR9P59020 149 aa9.61□□□□□ -0.87
SLC28A1-201ENST00000286749 TRBV10-2A0A0K0K1G8 114 aa9.61□□□□□ -0.87
SLC28A1-201ENST00000286749 A8MTW9 85 aa9.61□□□□□ -0.87
SLC28A1-201ENST00000286749 BBC3Q96PG8 261 aaPredicted RBP9.61□□□□□ -0.87
SLC28A1-201ENST00000286749 POLQO75417 2590 aa9.6□□□□□ -0.87
SLC28A1-201ENST00000286749 TMEM61Q8N0U2 210 aa9.6□□□□□ -0.87
SLC28A1-201ENST00000286749 CLUHP3Q96NS8 147 aa9.6□□□□□ -0.87
SLC28A1-201ENST00000286749 ZFAND6Q6FIF0 208 aa9.6□□□□□ -0.87
SLC28A1-201ENST00000286749 DAND5Q8N907 189 aa9.59□□□□□ -0.87
SLC28A1-201ENST00000286749 RNF183Q96D59 192 aa9.59□□□□□ -0.87
SLC28A1-201ENST00000286749 LINC01587Q99440 93 aa9.59□□□□□ -0.87
SLC28A1-201ENST00000286749 CITED1Q99966 193 aa9.59□□□□□ -0.87
SLC28A1-201ENST00000286749 A0A096LNT2 108 aa9.59□□□□□ -0.87
SLC28A1-201ENST00000286749 J3QLI3 93 aa9.59□□□□□ -0.87
SLC28A1-201ENST00000286749 C11orf72Q8NBR9 251 aa9.59□□□□□ -0.87
SLC28A1-201ENST00000286749 CLEC2BQ92478 149 aa9.59□□□□□ -0.87
SLC28A1-201ENST00000286749 CDKN2A-AS1Q9UH64 79 aa9.59□□□□□ -0.87
SLC28A1-201ENST00000286749 IGHV3-53P01767 116 aa9.58□□□□□ -0.88
SLC28A1-201ENST00000286749 RPL13AP40429 203 aaKnown RBP9.58□□□□□ -0.88
SLC28A1-201ENST00000286749 PIK3CD-AS1Q5SR53 167 aa9.58□□□□□ -0.88
SLC28A1-201ENST00000286749 Q6YL49 198 aa9.58□□□□□ -0.88
SLC28A1-201ENST00000286749 TEX29Q8N6K0 151 aa9.58□□□□□ -0.88
SLC28A1-201ENST00000286749 C2orf82Q6UX34 121 aa9.58□□□□□ -0.88
SLC28A1-201ENST00000286749 UBE2WQ96B02 151 aa9.58□□□□□ -0.88
SLC28A1-201ENST00000286749 LINC01600Q96MT4 127 aa9.58□□□□□ -0.88
SLC28A1-201ENST00000286749 MAP6D1Q9H9H5 199 aa9.58□□□□□ -0.88
SLC28A1-201ENST00000286749 FAM208BQ5VWN6 2430 aa9.58□□□□□ -0.88
SLC28A1-201ENST00000286749 H7C423 109 aa9.57□□□□□ -0.88
SLC28A1-201ENST00000286749 ANAPC13Q9BS18 74 aa9.57□□□□□ -0.88
SLC28A1-201ENST00000286749 MYO18BQ8IUG5 2567 aa9.57□□□□□ -0.88
SLC28A1-201ENST00000286749 CENPEQ02224 2701 aa9.57□□□□□ -0.88
SLC28A1-201ENST00000286749 CRLF1O75462 422 aa9.57□□□□□ -0.88
SLC28A1-201ENST00000286749 COX6CP09669 75 aa9.57□□□□□ -0.88
SLC28A1-201ENST00000286749 YAE1D1Q9NRH1 226 aa9.57□□□□□ -0.88
SLC28A1-201ENST00000286749 ZNF462Q96JM2 2506 aa9.57□□□□□ -0.88
SLC28A1-201ENST00000286749 TRAV8-4A0A0B4J246 113 aa9.56□□□□□ -0.88
SLC28A1-201ENST00000286749 PRB1P04280 392 aa9.56□□□□□ -0.88
SLC28A1-201ENST00000286749 HIST2H2BDQ6DRA6 164 aa9.56□□□□□ -0.88
SLC28A1-201ENST00000286749 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.56□□□□□ -0.88
SLC28A1-201ENST00000286749 TMEM101Q96IK0 257 aa9.56□□□□□ -0.88
SLC28A1-201ENST00000286749 DNAJC30Q96LL9 226 aa9.56□□□□□ -0.88
SLC28A1-201ENST00000286749 TRAV4A0A0B4J268 109 aa9.56□□□□□ -0.88
SLC28A1-201ENST00000286749 SNCGO76070 127 aa9.56□□□□□ -0.88
SLC28A1-201ENST00000286749 TIMM17BO60830 172 aa9.55□□□□□ -0.88
SLC28A1-201ENST00000286749 KHDC1LQ5JSQ8 128 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms