RNA–Protein interactions for RNA: ENST00000286428.5

VBP1-201, Transcript of VHL binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VBP1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-201ENST00000286428 SIVA1O15304 175 aa13.55□□□□□ -0.24
VBP1-201ENST00000286428 CST9LQ9H4G1 147 aa13.55□□□□□ -0.24
VBP1-201ENST00000286428 NMUP48645 174 aa13.54□□□□□ -0.24
VBP1-201ENST00000286428 PRADC1Q9BSG0 188 aa13.54□□□□□ -0.24
VBP1-201ENST00000286428 SNHG12Q9BXW3 62 aa13.54□□□□□ -0.24
VBP1-201ENST00000286428 SPANXA1Q9NS26 97 aa13.54□□□□□ -0.24
VBP1-201ENST00000286428 LYRM9A8MSI8 78 aa13.53□□□□□ -0.24
VBP1-201ENST00000286428 BOD1L2Q8IYS8 172 aa13.53□□□□□ -0.24
VBP1-201ENST00000286428 SLC25A29Q8N8R3 303 aa13.53□□□□□ -0.24
VBP1-201ENST00000286428 VCX2Q9H322 139 aa13.53□□□□□ -0.24
VBP1-201ENST00000286428 X6R8D5 127 aa13.53□□□□□ -0.24
VBP1-201ENST00000286428 TMEM97Q5BJF2 176 aa13.53□□□□□ -0.24
VBP1-201ENST00000286428 EMP1P54849 157 aa13.52□□□□□ -0.25
VBP1-201ENST00000286428 LINC00612Q8N6U2 182 aa13.52□□□□□ -0.25
VBP1-201ENST00000286428 DEFB104AQ8WTQ1 72 aa13.52□□□□□ -0.25
VBP1-201ENST00000286428 FLNBO75369 2602 aaKnown RBP13.51□□□□□ -0.25
VBP1-201ENST00000286428 IGHV4-30-4P0DP06 118 aa13.51□□□□□ -0.25
VBP1-201ENST00000286428 MIFP14174 115 aa13.51□□□□□ -0.25
VBP1-201ENST00000286428 HERVK_113P61574 105 aa13.51□□□□□ -0.25
VBP1-201ENST00000286428 PHLDA1Q8WV24 401 aaPredicted RBP13.5□□□□□ -0.25
VBP1-201ENST00000286428 UBE2D3P61077 147 aa13.5□□□□□ -0.25
VBP1-201ENST00000286428 UBE2D2P62837 147 aa13.5□□□□□ -0.25
VBP1-201ENST00000286428 PRIMA1Q86XR5 153 aa13.5□□□□□ -0.25
VBP1-201ENST00000286428 OR11H2Q8NH07 326 aa13.5□□□□□ -0.25
VBP1-201ENST00000286428 CHCHD7Q9BUK0 85 aa13.5□□□□□ -0.25
VBP1-201ENST00000286428 GTSF1LQ9H1H1 148 aa13.5□□□□□ -0.25
VBP1-201ENST00000286428 DEFB135Q30KP9 77 aa13.49□□□□□ -0.25
VBP1-201ENST00000286428 TIMM21Q9BVV7 248 aa13.49□□□□□ -0.25
VBP1-201ENST00000286428 IGLV4-3A0A075B6K6 122 aa13.48□□□□□ -0.25
VBP1-201ENST00000286428 A8MZ25 164 aa13.48□□□□□ -0.25
VBP1-201ENST00000286428 EREGO14944 169 aa13.48□□□□□ -0.25
VBP1-201ENST00000286428 FGF6P10767 208 aa13.48□□□□□ -0.25
VBP1-201ENST00000286428 EGFEM1PQ0D2K5 195 aa13.48□□□□□ -0.25
VBP1-201ENST00000286428 Q9UF83 564 aa13.48□□□□□ -0.25
VBP1-201ENST00000286428 IGHV3-38A0A0C4DH36 116 aa13.47□□□□□ -0.25
VBP1-201ENST00000286428 GAGE12JA6NER3 117 aa13.47□□□□□ -0.25
VBP1-201ENST00000286428 DEFB130BP0DP73 79 aa13.47□□□□□ -0.25
VBP1-201ENST00000286428 DEFB130AP0DP74 79 aa13.47□□□□□ -0.25
VBP1-201ENST00000286428 GAGE1Q13065 139 aa13.47□□□□□ -0.25
VBP1-201ENST00000286428 GAGE4Q13068 117 aa13.47□□□□□ -0.25
VBP1-201ENST00000286428 GAGE5Q13069 117 aa13.47□□□□□ -0.25
VBP1-201ENST00000286428 FHL2Q14192 279 aa13.47□□□□□ -0.25
VBP1-201ENST00000286428 GAGE13Q4V321 117 aa13.47□□□□□ -0.25
VBP1-201ENST00000286428 COL5A1-AS1Q5SY13 56 aa13.47□□□□□ -0.25
VBP1-201ENST00000286428 UBE2D4Q9Y2X8 147 aa13.47□□□□□ -0.25
VBP1-201ENST00000286428 E9PLD3 99 aa13.47□□□□□ -0.25
VBP1-201ENST00000286428 BATFQ16520 125 aa13.47□□□□□ -0.25
VBP1-201ENST00000286428 OXLD1Q5BKU9 147 aa13.47□□□□□ -0.25
VBP1-201ENST00000286428 DGAT2L7PQ6IED9 249 aa13.47□□□□□ -0.25
VBP1-201ENST00000286428 NFE4Q86UQ8 179 aa13.47□□□□□ -0.25
VBP1-201ENST00000286428 RNF183Q96D59 192 aa13.47□□□□□ -0.25
VBP1-201ENST00000286428 NACAE9PAV3 2078 aa13.46□□□□□ -0.25
VBP1-201ENST00000286428 C11orf86A6NJI1 115 aa13.46□□□□□ -0.26
VBP1-201ENST00000286428 H7C423 109 aa13.46□□□□□ -0.26
VBP1-201ENST00000286428 MRPS36P82909 103 aaKnown RBP13.46□□□□□ -0.26
VBP1-201ENST00000286428 AMELXQ99217 191 aa13.46□□□□□ -0.26
VBP1-201ENST00000286428 IGLV4-69A0A075B6H9 119 aa13.45□□□□□ -0.26
VBP1-201ENST00000286428 CSDC2Q9Y534 153 aaKnown RBP13.45□□□□□ -0.26
VBP1-201ENST00000286428 TEX48A0A1B0GUV7 120 aa13.44□□□□□ -0.26
VBP1-201ENST00000286428 CYSRT1A8MQ03 144 aa13.44□□□□□ -0.26
VBP1-201ENST00000286428 PCP2Q8IVA1 136 aa13.44□□□□□ -0.26
VBP1-201ENST00000286428 HIGD1BQ9P298 99 aa13.44□□□□□ -0.26
VBP1-201ENST00000286428 HINT1P49773 126 aaPredicted RBP13.44□□□□□ -0.26
VBP1-201ENST00000286428 FAM222AQ5U5X8 452 aa13.44□□□□□ -0.26
VBP1-201ENST00000286428 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.43□□□□□ -0.26
VBP1-201ENST00000286428 IGKV2D-26A0A0A0MRZ7 120 aa13.43□□□□□ -0.26
VBP1-201ENST00000286428 IGKV2-29A2NJV5 120 aaPredicted RBP13.43□□□□□ -0.26
VBP1-201ENST00000286428 UBE2L6O14933 153 aa13.43□□□□□ -0.26
VBP1-201ENST00000286428 TCTAP57738 103 aa13.43□□□□□ -0.26
VBP1-201ENST00000286428 TMEM170BQ5T4T1 132 aa13.43□□□□□ -0.26
VBP1-201ENST00000286428 C2orf91Q6ZV80 131 aa13.43□□□□□ -0.26
VBP1-201ENST00000286428 PRO0255Q9UI72 69 aa13.43□□□□□ -0.26
VBP1-201ENST00000286428 TRBV25-1A0A075B6N4 114 aa13.42□□□□□ -0.26
VBP1-201ENST00000286428 SPART-AS1P0CW21 52 aa13.42□□□□□ -0.26
VBP1-201ENST00000286428 TRAV8-6A0A0B4J262 113 aa13.41□□□□□ -0.26
VBP1-201ENST00000286428 IGHV4-28A0A0C4DH34 117 aa13.41□□□□□ -0.26
VBP1-201ENST00000286428 HSD52Q0P140 79 aa13.41□□□□□ -0.26
VBP1-201ENST00000286428 MPV17L2Q567V2 206 aa13.41□□□□□ -0.26
VBP1-201ENST00000286428 OPRPNQ99935 248 aaPredicted RBP13.41□□□□□ -0.26
VBP1-201ENST00000286428 TMEM243Q9BU79 118 aa13.41□□□□□ -0.26
VBP1-201ENST00000286428 CHAC1Q9BUX1 264 aa13.41□□□□□ -0.26
VBP1-201ENST00000286428 JMJD1CQ15652 2540 aa13.41□□□□□ -0.26
VBP1-201ENST00000286428 TEP1Q99973 2627 aaKnown RBP13.41□□□□□ -0.26
VBP1-201ENST00000286428 DAD1P61803 113 aa13.4□□□□□ -0.26
VBP1-201ENST00000286428 SEC11AP67812 179 aa13.4□□□□□ -0.26
VBP1-201ENST00000286428 TMEM101Q96IK0 257 aa13.4□□□□□ -0.26
VBP1-201ENST00000286428 MYMXA0A1B0GTQ4 84 aa13.39□□□□□ -0.27
VBP1-201ENST00000286428 Q8NAQ8 132 aa13.39□□□□□ -0.27
VBP1-201ENST00000286428 TINCRA0A1B0GVN0 87 aa13.38□□□□□ -0.27
VBP1-201ENST00000286428 ZNF25P17030 456 aaPredicted RBP13.38□□□□□ -0.27
VBP1-201ENST00000286428 KRTAP10-11P60412 298 aa13.38□□□□□ -0.27
VBP1-201ENST00000286428 BVES-AS1Q5T3Y7 98 aa13.38□□□□□ -0.27
VBP1-201ENST00000286428 AMMECR1LQ6DCA0 310 aa13.38□□□□□ -0.27
VBP1-201ENST00000286428 NTM-AS1Q6ZSK4 140 aa13.37□□□□□ -0.27
VBP1-201ENST00000286428 ATRQ13535 2644 aa13.37□□□□□ -0.27
VBP1-201ENST00000286428 ATP5G1P05496 136 aa13.37□□□□□ -0.27
VBP1-201ENST00000286428 LINC00694P0DN24 101 aa13.37□□□□□ -0.27
VBP1-201ENST00000286428 CEMP1Q6PRD7 247 aaPredicted RBP13.37□□□□□ -0.27
VBP1-201ENST00000286428 SBSPONQ8IVN8 264 aa13.37□□□□□ -0.27
VBP1-201ENST00000286428 OR5A1Q8NGJ0 315 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms