RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 I3L3M4 83 aa17.38■□□□□ 0.37
SSBP4-201ENST00000270061 ZNF479Q96JC4 524 aa17.38■□□□□ 0.37
SSBP4-201ENST00000270061 VAMP8Q9BV40 100 aa17.37■□□□□ 0.37
SSBP4-201ENST00000270061 TNFRSF18Q9Y5U5 241 aa17.37■□□□□ 0.37
SSBP4-201ENST00000270061 P0DMU3 169 aa17.36■□□□□ 0.37
SSBP4-201ENST00000270061 FAM231AP0DMU4 169 aa17.36■□□□□ 0.37
SSBP4-201ENST00000270061 FAM231CP0DMU5 169 aa17.36■□□□□ 0.37
SSBP4-201ENST00000270061 LGALS9CQ6DKI2 356 aa17.36■□□□□ 0.37
SSBP4-201ENST00000270061 LINC00612Q8N6U2 182 aa17.36■□□□□ 0.37
SSBP4-201ENST00000270061 NEXN-AS1Q8NBZ9 246 aa17.36■□□□□ 0.37
SSBP4-201ENST00000270061 C18orf15Q96N68 181 aa17.36■□□□□ 0.37
SSBP4-201ENST00000270061 GAGE12BA1L429 117 aa17.35■□□□□ 0.37
SSBP4-201ENST00000270061 GAGE7O76087 117 aa17.35■□□□□ 0.37
SSBP4-201ENST00000270061 GAGE12FP0CL80 117 aa17.35■□□□□ 0.37
SSBP4-201ENST00000270061 GAGE12GP0CL81 117 aa17.35■□□□□ 0.37
SSBP4-201ENST00000270061 GAGE12IP0CL82 117 aa17.35■□□□□ 0.37
SSBP4-201ENST00000270061 RHOHQ15669 191 aa17.35■□□□□ 0.37
SSBP4-201ENST00000270061 C2orf66Q6UXQ4 117 aa17.35■□□□□ 0.37
SSBP4-201ENST00000270061 TRGV2A0A075B6R0 118 aa17.34■□□□□ 0.37
SSBP4-201ENST00000270061 TRBV10-1A0A0K0K1A3 114 aa17.33■□□□□ 0.37
SSBP4-201ENST00000270061 TSTD3H0UI37 97 aa17.33■□□□□ 0.37
SSBP4-201ENST00000270061 H0Y8G0 127 aa17.33■□□□□ 0.36
SSBP4-201ENST00000270061 TSHBP01222 138 aa17.33■□□□□ 0.36
SSBP4-201ENST00000270061 LINC00476Q8WZB0 136 aa17.32■□□□□ 0.36
SSBP4-201ENST00000270061 Q9UF83 564 aa17.32■□□□□ 0.36
SSBP4-201ENST00000270061 CYSLTR1Q9Y271 337 aa17.32■□□□□ 0.36
SSBP4-201ENST00000270061 TRAV9-2A0A087WT02 112 aa17.31■□□□□ 0.36
SSBP4-201ENST00000270061 SCGB3A1Q96QR1 104 aa17.31■□□□□ 0.36
SSBP4-201ENST00000270061 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP17.3■□□□□ 0.36
SSBP4-201ENST00000270061 K7EQD1 137 aa17.3■□□□□ 0.36
SSBP4-201ENST00000270061 EMP1P54849 157 aa17.3■□□□□ 0.36
SSBP4-201ENST00000270061 ATOH7Q8N100 152 aa17.3■□□□□ 0.36
SSBP4-201ENST00000270061 PRO1933Q9H354 126 aa17.3■□□□□ 0.36
SSBP4-201ENST00000270061 PAM16Q9Y3D7 125 aa17.3■□□□□ 0.36
SSBP4-201ENST00000270061 ERASQ7Z444 233 aa17.3■□□□□ 0.36
SSBP4-201ENST00000270061 LYRM9A8MSI8 78 aa17.29■□□□□ 0.36
SSBP4-201ENST00000270061 PRSS1P07477 247 aa17.29■□□□□ 0.36
SSBP4-201ENST00000270061 CELA1Q9UNI1 258 aa17.29■□□□□ 0.36
SSBP4-201ENST00000270061 TRBV6-4A0A1B0GX49 114 aa17.28■□□□□ 0.36
SSBP4-201ENST00000270061 LY6G6CO95867 125 aa17.28■□□□□ 0.36
SSBP4-201ENST00000270061 Q6ZTC4 211 aa17.28■□□□□ 0.36
SSBP4-201ENST00000270061 SLC25A29Q8N8R3 303 aa17.28■□□□□ 0.36
SSBP4-201ENST00000270061 TRBV7-3A0A075B6L6 115 aa17.27■□□□□ 0.35
SSBP4-201ENST00000270061 SPATA45Q537H7 98 aa17.27■□□□□ 0.35
SSBP4-201ENST00000270061 ODF1Q14990 250 aa17.26■□□□□ 0.35
SSBP4-201ENST00000270061 Q6ZN92 141 aa17.26■□□□□ 0.35
SSBP4-201ENST00000270061 C20orf203Q8NBC4 194 aa17.26■□□□□ 0.35
SSBP4-201ENST00000270061 TRAV12-1A0A0B4J245 112 aa17.25■□□□□ 0.35
SSBP4-201ENST00000270061 IGIPA6NJ69 53 aa17.25■□□□□ 0.35
SSBP4-201ENST00000270061 RPL36AP83881 106 aaKnown RBP17.25■□□□□ 0.35
SSBP4-201ENST00000270061 FHL2Q14192 279 aa17.25■□□□□ 0.35
SSBP4-201ENST00000270061 RPL36ALQ969Q0 106 aaKnown RBP17.25■□□□□ 0.35
SSBP4-201ENST00000270061 TIMM17AQ99595 171 aa17.25■□□□□ 0.35
SSBP4-201ENST00000270061 PMCHL2Q9BQD1 86 aa17.25■□□□□ 0.35
SSBP4-201ENST00000270061 KMT2AQ03164 3969 aa17.25■□□□□ 0.35
SSBP4-201ENST00000270061 TRAV10A0A0B4J240 114 aa17.25■□□□□ 0.35
SSBP4-201ENST00000270061 C12orf74Q32Q52 190 aa17.25■□□□□ 0.35
SSBP4-201ENST00000270061 ZNRF2Q8NHG8 242 aa17.25■□□□□ 0.35
SSBP4-201ENST00000270061 DEFB104AQ8WTQ1 72 aa17.25■□□□□ 0.35
SSBP4-201ENST00000270061 TMEM141Q96I45 108 aa17.25■□□□□ 0.35
SSBP4-201ENST00000270061 TRGV4A0A0C4DH28 118 aa17.24■□□□□ 0.35
SSBP4-201ENST00000270061 MAJINQ3KP22 176 aa17.24■□□□□ 0.35
SSBP4-201ENST00000270061 IGLL5B9A064 214 aa17.23■□□□□ 0.35
SSBP4-201ENST00000270061 SPART-AS1P0CW21 52 aa17.23■□□□□ 0.35
SSBP4-201ENST00000270061 DEFB130BP0DP73 79 aa17.23■□□□□ 0.35
SSBP4-201ENST00000270061 DEFB130AP0DP74 79 aa17.23■□□□□ 0.35
SSBP4-201ENST00000270061 TCTAP57738 103 aa17.23■□□□□ 0.35
SSBP4-201ENST00000270061 RPL39P62891 51 aaKnown RBP17.23■□□□□ 0.35
SSBP4-201ENST00000270061 FAM222AQ5U5X8 452 aa17.23■□□□□ 0.35
SSBP4-201ENST00000270061 DKK2Q9UBU2 259 aa17.23■□□□□ 0.35
SSBP4-201ENST00000270061 A0A087WX48 190 aa17.23■□□□□ 0.35
SSBP4-201ENST00000270061 DAZ4Q86SG3 579 aaKnown RBP17.22■□□□□ 0.35
SSBP4-201ENST00000270061 BAALCQ8WXS3 180 aa17.22■□□□□ 0.35
SSBP4-201ENST00000270061 DAZ3Q9NR90 486 aaKnown RBP17.22■□□□□ 0.35
SSBP4-201ENST00000270061 HSBP1L1C9JCN9 74 aa17.21■□□□□ 0.35
SSBP4-201ENST00000270061 UBE2D3P61077 147 aa17.21■□□□□ 0.35
SSBP4-201ENST00000270061 UBE2D2P62837 147 aa17.21■□□□□ 0.35
SSBP4-201ENST00000270061 COTL1Q14019 142 aa17.21■□□□□ 0.35
SSBP4-201ENST00000270061 TEX48A0A1B0GUV7 120 aa17.2■□□□□ 0.34
SSBP4-201ENST00000270061 DDTP30046 118 aa17.2■□□□□ 0.34
SSBP4-201ENST00000270061 DEFB131BA0A096LNP1 70 aa17.19■□□□□ 0.34
SSBP4-201ENST00000270061 hDV102S1A0JD36 115 aa17.19■□□□□ 0.34
SSBP4-201ENST00000270061 CHCHD7Q9BUK0 85 aa17.19■□□□□ 0.34
SSBP4-201ENST00000270061 PRADC1Q9BSG0 188 aa17.18■□□□□ 0.34
SSBP4-201ENST00000270061 PYGO1Q9Y3Y4 419 aa17.18■□□□□ 0.34
SSBP4-201ENST00000270061 MIEN1Q9BRT3 115 aa17.17■□□□□ 0.34
SSBP4-201ENST00000270061 APLNQ9ULZ1 77 aa17.17■□□□□ 0.34
SSBP4-201ENST00000270061 IGHV3-38A0A0C4DH36 116 aa17.17■□□□□ 0.34
SSBP4-201ENST00000270061 GAGE12JA6NER3 117 aa17.17■□□□□ 0.34
SSBP4-201ENST00000270061 LINC00587B1AMM8 73 aa17.17■□□□□ 0.34
SSBP4-201ENST00000270061 DPM2O94777 84 aa17.17■□□□□ 0.34
SSBP4-201ENST00000270061 IGKCP01834 107 aa17.17■□□□□ 0.34
SSBP4-201ENST00000270061 IGLC3P0DOY3 106 aa17.17■□□□□ 0.34
SSBP4-201ENST00000270061 GAGE1Q13065 139 aa17.17■□□□□ 0.34
SSBP4-201ENST00000270061 GAGE4Q13068 117 aa17.17■□□□□ 0.34
SSBP4-201ENST00000270061 GAGE5Q13069 117 aa17.17■□□□□ 0.34
SSBP4-201ENST00000270061 GAGE13Q4V321 117 aa17.17■□□□□ 0.34
SSBP4-201ENST00000270061 HHLA3Q9XRX5 114 aa17.17■□□□□ 0.34
SSBP4-201ENST00000270061 F8VRH5 84 aa17.16■□□□□ 0.34
SSBP4-201ENST00000270061 NPSP0C0P6 89 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 557.4 ms