RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 C16orf92Q96LL3 132 aa11.9□□□□□ -0.5
MAP1LC3B-201ENST00000268607 GPHB5Q86YW7 130 aa11.89□□□□□ -0.51
MAP1LC3B-201ENST00000268607 TMEM126AQ9H061 195 aa11.89□□□□□ -0.51
MAP1LC3B-201ENST00000268607 IGHG2P01859 326 aa11.89□□□□□ -0.51
MAP1LC3B-201ENST00000268607 RPL11P62913 178 aaKnown RBP11.89□□□□□ -0.51
MAP1LC3B-201ENST00000268607 ZNF56Q15929 161 aa11.89□□□□□ -0.51
MAP1LC3B-201ENST00000268607 FAM223BA6NKX1 122 aa11.88□□□□□ -0.51
MAP1LC3B-201ENST00000268607 LGALS9O00182 355 aa11.88□□□□□ -0.51
MAP1LC3B-201ENST00000268607 PMVKQ15126 192 aa11.88□□□□□ -0.51
MAP1LC3B-201ENST00000268607 Q1RN00 199 aa11.88□□□□□ -0.51
MAP1LC3B-201ENST00000268607 FAM223AQ8IWN6 122 aa11.88□□□□□ -0.51
MAP1LC3B-201ENST00000268607 ZNRF2Q8NHG8 242 aa11.88□□□□□ -0.51
MAP1LC3B-201ENST00000268607 C20orf173Q96LM9 149 aa11.88□□□□□ -0.51
MAP1LC3B-201ENST00000268607 NSD1Q96L73 2696 aaPredicted RBP11.88□□□□□ -0.51
MAP1LC3B-201ENST00000268607 IGIPA6NJ69 53 aa11.88□□□□□ -0.51
MAP1LC3B-201ENST00000268607 RPL13AP40429 203 aaKnown RBP11.88□□□□□ -0.51
MAP1LC3B-201ENST00000268607 AMELXQ99217 191 aa11.88□□□□□ -0.51
MAP1LC3B-201ENST00000268607 H3BMM0 161 aa11.87□□□□□ -0.51
MAP1LC3B-201ENST00000268607 GNRH2O43555 120 aa11.87□□□□□ -0.51
MAP1LC3B-201ENST00000268607 LINC00694P0DN24 101 aa11.87□□□□□ -0.51
MAP1LC3B-201ENST00000268607 ATXN8Q156A1 80 aa11.87□□□□□ -0.51
MAP1LC3B-201ENST00000268607 PAPPA-AS1Q5QFB9 102 aa11.87□□□□□ -0.51
MAP1LC3B-201ENST00000268607 TMEM263Q8WUH6 116 aaKnown RBP11.87□□□□□ -0.51
MAP1LC3B-201ENST00000268607 UBE2WQ96B02 151 aa11.87□□□□□ -0.51
MAP1LC3B-201ENST00000268607 MRPL53Q96EL3 112 aaKnown RBP11.87□□□□□ -0.51
MAP1LC3B-201ENST00000268607 SORL1Q92673 2214 aa11.87□□□□□ -0.51
MAP1LC3B-201ENST00000268607 J3QQQ9 107 aa11.87□□□□□ -0.51
MAP1LC3B-201ENST00000268607 EDN2P20800 178 aa11.87□□□□□ -0.51
MAP1LC3B-201ENST00000268607 U3KQE9 123 aa11.87□□□□□ -0.51
MAP1LC3B-201ENST00000268607 ZFAND2AQ8N6M9 145 aa11.86□□□□□ -0.51
MAP1LC3B-201ENST00000268607 CSDC2Q9Y534 153 aaKnown RBP11.86□□□□□ -0.51
MAP1LC3B-201ENST00000268607 F8P00451 2351 aa11.86□□□□□ -0.51
MAP1LC3B-201ENST00000268607 LOC107984640A0A0U1RRK4 108 aa11.86□□□□□ -0.51
MAP1LC3B-201ENST00000268607 LGALS3P17931 250 aaKnown RBP11.86□□□□□ -0.51
MAP1LC3B-201ENST00000268607 P0DMU3 169 aa11.85□□□□□ -0.51
MAP1LC3B-201ENST00000268607 FAM231AP0DMU4 169 aa11.85□□□□□ -0.51
MAP1LC3B-201ENST00000268607 FAM231CP0DMU5 169 aa11.85□□□□□ -0.51
MAP1LC3B-201ENST00000268607 TRAV21A0A0B4J279 112 aa11.85□□□□□ -0.51
MAP1LC3B-201ENST00000268607 TRBV10-2A0A0K0K1G8 114 aa11.85□□□□□ -0.51
MAP1LC3B-201ENST00000268607 DUX3Q96PT4 197 aa11.85□□□□□ -0.51
MAP1LC3B-201ENST00000268607 IGHV3-64A0A075B6Q5 118 aa11.84□□□□□ -0.51
MAP1LC3B-201ENST00000268607 RNASE4P34096 147 aaKnown RBP11.84□□□□□ -0.51
MAP1LC3B-201ENST00000268607 C2orf82Q6UX34 121 aa11.84□□□□□ -0.51
MAP1LC3B-201ENST00000268607 F6UB75 175 aa11.83□□□□□ -0.51
MAP1LC3B-201ENST00000268607 KRTAP1-1Q07627 177 aa11.83□□□□□ -0.51
MAP1LC3B-201ENST00000268607 JPT2Q9H910 190 aa11.83□□□□□ -0.51
MAP1LC3B-201ENST00000268607 MUSTN1Q8IVN3 82 aa11.83□□□□□ -0.52
MAP1LC3B-201ENST00000268607 PPP1R17O96001 155 aa11.83□□□□□ -0.52
MAP1LC3B-201ENST00000268607 RNASE3P12724 160 aaKnown RBP11.83□□□□□ -0.52
MAP1LC3B-201ENST00000268607 NDUFA4O00483 81 aa11.82□□□□□ -0.52
MAP1LC3B-201ENST00000268607 OPRPNQ99935 248 aaPredicted RBP11.82□□□□□ -0.52
MAP1LC3B-201ENST00000268607 TRIAP1O43715 76 aa11.82□□□□□ -0.52
MAP1LC3B-201ENST00000268607 ZNF876PQ49A33 203 aa11.82□□□□□ -0.52
MAP1LC3B-201ENST00000268607 USMG5Q96IX5 58 aa11.82□□□□□ -0.52
MAP1LC3B-201ENST00000268607 LENEPQ9Y5L5 61 aa11.82□□□□□ -0.52
MAP1LC3B-201ENST00000268607 TRGV11A0A075B6L2 103 aa11.81□□□□□ -0.52
MAP1LC3B-201ENST00000268607 FAM236AA0A1B0GUQ0 79 aa11.81□□□□□ -0.52
MAP1LC3B-201ENST00000268607 FAM236BA0A1B0GV22 79 aa11.81□□□□□ -0.52
MAP1LC3B-201ENST00000268607 J3QLI3 93 aa11.81□□□□□ -0.52
MAP1LC3B-201ENST00000268607 LINC00315P59091 139 aa11.81□□□□□ -0.52
MAP1LC3B-201ENST00000268607 TMEM141Q96I45 108 aa11.81□□□□□ -0.52
MAP1LC3B-201ENST00000268607 LINC00477Q96M19 166 aa11.81□□□□□ -0.52
MAP1LC3B-201ENST00000268607 A0A0B4J2C4 111 aa11.81□□□□□ -0.52
MAP1LC3B-201ENST00000268607 H7C423 109 aa11.81□□□□□ -0.52
MAP1LC3B-201ENST00000268607 POLR2KP53803 58 aaKnown RBP11.81□□□□□ -0.52
MAP1LC3B-201ENST00000268607 CEMP1Q6PRD7 247 aaPredicted RBP11.81□□□□□ -0.52
MAP1LC3B-201ENST00000268607 DNAJC30Q96LL9 226 aa11.81□□□□□ -0.52
MAP1LC3B-201ENST00000268607 RHPN1-AS1Q9BWJ2 59 aa11.81□□□□□ -0.52
MAP1LC3B-201ENST00000268607 A0A087WWL8 130 aa11.8□□□□□ -0.52
MAP1LC3B-201ENST00000268607 IGLV1-40P01703 118 aa11.8□□□□□ -0.52
MAP1LC3B-201ENST00000268607 ZNF22P17026 224 aaPredicted RBP11.8□□□□□ -0.52
MAP1LC3B-201ENST00000268607 C9orf139Q6ZV77 190 aa11.8□□□□□ -0.52
MAP1LC3B-201ENST00000268607 TENM1Q9UKZ4 2725 aa11.8□□□□□ -0.52
MAP1LC3B-201ENST00000268607 MUC4Q99102 2169 aa11.8□□□□□ -0.52
MAP1LC3B-201ENST00000268607 F5H697 171 aa11.8□□□□□ -0.52
MAP1LC3B-201ENST00000268607 FSHBP01225 129 aa11.8□□□□□ -0.52
MAP1LC3B-201ENST00000268607 SUMO4Q6EEV6 95 aa11.8□□□□□ -0.52
MAP1LC3B-201ENST00000268607 TIMM17AQ99595 171 aa11.8□□□□□ -0.52
MAP1LC3B-201ENST00000268607 KIF25-AS1Q9Y6Z4 181 aa11.8□□□□□ -0.52
MAP1LC3B-201ENST00000268607 MRPL23Q16540 153 aaKnown RBP11.79□□□□□ -0.52
MAP1LC3B-201ENST00000268607 M0R2P5 195 aa11.79□□□□□ -0.52
MAP1LC3B-201ENST00000268607 C5orf47Q569G3 176 aa11.79□□□□□ -0.52
MAP1LC3B-201ENST00000268607 LINC01600Q96MT4 127 aa11.79□□□□□ -0.52
MAP1LC3B-201ENST00000268607 C2CD3Q4AC94 2353 aa11.78□□□□□ -0.52
MAP1LC3B-201ENST00000268607 TRBV7-7A0A0K0K1E9 115 aa11.78□□□□□ -0.52
MAP1LC3B-201ENST00000268607 SDHAF1A6NFY7 115 aa11.78□□□□□ -0.52
MAP1LC3B-201ENST00000268607 VCYO14598 125 aa11.78□□□□□ -0.52
MAP1LC3B-201ENST00000268607 C9orf153Q5TBE3 101 aa11.78□□□□□ -0.52
MAP1LC3B-201ENST00000268607 Q6YL49 198 aa11.78□□□□□ -0.52
MAP1LC3B-201ENST00000268607 ZNF580Q9UK33 172 aa11.78□□□□□ -0.52
MAP1LC3B-201ENST00000268607 IGHV4OR15-8A0A075B7B6 117 aa11.78□□□□□ -0.52
MAP1LC3B-201ENST00000268607 A0A087WW49 117 aa11.78□□□□□ -0.52
MAP1LC3B-201ENST00000268607 POM121L12Q8N7R1 296 aa11.78□□□□□ -0.52
MAP1LC3B-201ENST00000268607 ZNF256Q9Y2P7 627 aaPredicted RBP11.78□□□□□ -0.52
MAP1LC3B-201ENST00000268607 KLK5Q9Y337 293 aaPredicted RBP11.78□□□□□ -0.52
MAP1LC3B-201ENST00000268607 TMEM223A0PJW6 202 aa11.77□□□□□ -0.52
MAP1LC3B-201ENST00000268607 LEPROTO15243 131 aa11.77□□□□□ -0.52
MAP1LC3B-201ENST00000268607 C11orf44Q8N8P7 122 aa11.77□□□□□ -0.52
MAP1LC3B-201ENST00000268607 MED14OSP0DP75 135 aa11.77□□□□□ -0.53
MAP1LC3B-201ENST00000268607 CFHR3Q02985 330 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms