RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 C19orf71A6NCJ1 209 aa12.71□□□□□ -0.37
TSPAN3-201ENST00000267970 SPANXB1Q9NS25 103 aaPredicted RBP12.71□□□□□ -0.37
TSPAN3-201ENST00000267970 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.71□□□□□ -0.37
TSPAN3-201ENST00000267970 MAP6D1Q9H9H5 199 aa12.71□□□□□ -0.37
TSPAN3-201ENST00000267970 IGKV1D-37A0A075B6S9 117 aa12.71□□□□□ -0.38
TSPAN3-201ENST00000267970 C22orf34Q6ZV56 151 aa12.71□□□□□ -0.38
TSPAN3-201ENST00000267970 FAM19A5Q7Z5A7 132 aaPredicted RBP12.7□□□□□ -0.38
TSPAN3-201ENST00000267970 PRM2P04554 102 aa12.7□□□□□ -0.38
TSPAN3-201ENST00000267970 FAM19A1Q7Z5A9 133 aa12.7□□□□□ -0.38
TSPAN3-201ENST00000267970 NCOA6Q14686 2063 aaPredicted RBP12.7□□□□□ -0.38
TSPAN3-201ENST00000267970 PPDPFQ9H3Y8 114 aa12.7□□□□□ -0.38
TSPAN3-201ENST00000267970 C1orf229Q6ZS94 237 aaPredicted RBP12.69□□□□□ -0.38
TSPAN3-201ENST00000267970 CDKN2A-AS1Q9UH64 79 aa12.69□□□□□ -0.38
TSPAN3-201ENST00000267970 TIMM17BO60830 172 aa12.69□□□□□ -0.38
TSPAN3-201ENST00000267970 ZFAND2AQ8N6M9 145 aa12.69□□□□□ -0.38
TSPAN3-201ENST00000267970 CCDC140Q96MF4 163 aa12.69□□□□□ -0.38
TSPAN3-201ENST00000267970 ADAMTS9Q9P2N4 1935 aa12.69□□□□□ -0.38
TSPAN3-201ENST00000267970 IGLV2-8P01709 118 aa12.69□□□□□ -0.38
TSPAN3-201ENST00000267970 REG3AQ06141 175 aa12.69□□□□□ -0.38
TSPAN3-201ENST00000267970 C1orf195Q5TG92 126 aa12.69□□□□□ -0.38
TSPAN3-201ENST00000267970 A0A0J9YX75 114 aa12.68□□□□□ -0.38
TSPAN3-201ENST00000267970 C1orf158Q8N1D5 194 aa12.68□□□□□ -0.38
TSPAN3-201ENST00000267970 C4orf3Q8WVX3 66 aa12.68□□□□□ -0.38
TSPAN3-201ENST00000267970 K7ERS5 55 aa12.68□□□□□ -0.38
TSPAN3-201ENST00000267970 B9D2Q9BPU9 175 aa12.68□□□□□ -0.38
TSPAN3-201ENST00000267970 ZNF106Q9H2Y7 1883 aaKnown RBP12.68□□□□□ -0.38
TSPAN3-201ENST00000267970 TRIAP1O43715 76 aa12.67□□□□□ -0.38
TSPAN3-201ENST00000267970 A0A087WZ39 114 aa12.67□□□□□ -0.38
TSPAN3-201ENST00000267970 WFDC13Q8IUB5 93 aa12.67□□□□□ -0.38
TSPAN3-201ENST00000267970 FAM30AQ9NZY2 134 aa12.67□□□□□ -0.38
TSPAN3-201ENST00000267970 NANOS2P60321 138 aaKnown RBP12.66□□□□□ -0.38
TSPAN3-201ENST00000267970 IGKV2-28A0A075B6P5 120 aa12.66□□□□□ -0.38
TSPAN3-201ENST00000267970 IGKV2D-28P01615 120 aa12.66□□□□□ -0.38
TSPAN3-201ENST00000267970 MRPS12O15235 138 aaKnown RBP12.66□□□□□ -0.38
TSPAN3-201ENST00000267970 LINC00482Q8N8I6 264 aa12.66□□□□□ -0.38
TSPAN3-201ENST00000267970 CHCHD10Q8WYQ3 142 aaPredicted RBP12.66□□□□□ -0.38
TSPAN3-201ENST00000267970 SPINK6Q6UWN8 80 aa12.65□□□□□ -0.38
TSPAN3-201ENST00000267970 C10orf99Q6UWK7 81 aa12.65□□□□□ -0.38
TSPAN3-201ENST00000267970 CLUHP3Q96NS8 147 aa12.65□□□□□ -0.38
TSPAN3-201ENST00000267970 H3BQ85 93 aa12.65□□□□□ -0.39
TSPAN3-201ENST00000267970 PIP4P1Q86T03 277 aa12.64□□□□□ -0.39
TSPAN3-201ENST00000267970 KIAA1549Q9HCM3 1950 aa12.64□□□□□ -0.39
TSPAN3-201ENST00000267970 LINC00694P0DN24 101 aa12.64□□□□□ -0.39
TSPAN3-201ENST00000267970 TRBV10-1A0A0K0K1A3 114 aa12.64□□□□□ -0.39
TSPAN3-201ENST00000267970 IGLV1-47P01700 117 aa12.64□□□□□ -0.39
TSPAN3-201ENST00000267970 PRO0255Q9UI72 69 aa12.64□□□□□ -0.39
TSPAN3-201ENST00000267970 FAM222AQ5U5X8 452 aa12.64□□□□□ -0.39
TSPAN3-201ENST00000267970 GPHB5Q86YW7 130 aa12.64□□□□□ -0.39
TSPAN3-201ENST00000267970 PLXNB3Q9ULL4 1909 aa12.63□□□□□ -0.39
TSPAN3-201ENST00000267970 Q8N976 141 aa12.63□□□□□ -0.39
TSPAN3-201ENST00000267970 MED12LQ86YW9 2145 aa12.63□□□□□ -0.39
TSPAN3-201ENST00000267970 WNK1Q9H4A3 2382 aa12.63□□□□□ -0.39
TSPAN3-201ENST00000267970 A0A1B0GXF2 115 aa12.63□□□□□ -0.39
TSPAN3-201ENST00000267970 SOSTDC1Q6X4U4 206 aa12.63□□□□□ -0.39
TSPAN3-201ENST00000267970 SMAD5-AS1Q9Y6J3 95 aa12.63□□□□□ -0.39
TSPAN3-201ENST00000267970 A0A1W2PNU3 283 aaPredicted RBP12.62□□□□□ -0.39
TSPAN3-201ENST00000267970 CXCL5P42830 114 aa12.62□□□□□ -0.39
TSPAN3-201ENST00000267970 DNAJC9-AS1A6NH13 148 aa12.62□□□□□ -0.39
TSPAN3-201ENST00000267970 M0QXV9 152 aa12.62□□□□□ -0.39
TSPAN3-201ENST00000267970 TRBV27A0A0K0K1C4 114 aa12.62□□□□□ -0.39
TSPAN3-201ENST00000267970 Q6ZPA2 131 aa12.62□□□□□ -0.39
TSPAN3-201ENST00000267970 NEXN-AS1Q8NBZ9 246 aa12.62□□□□□ -0.39
TSPAN3-201ENST00000267970 C11orf45Q8TAV5 145 aa12.61□□□□□ -0.39
TSPAN3-201ENST00000267970 TMEM223A0PJW6 202 aa12.61□□□□□ -0.39
TSPAN3-201ENST00000267970 NDUFA7O95182 113 aa12.61□□□□□ -0.39
TSPAN3-201ENST00000267970 CRYGDP07320 174 aa12.61□□□□□ -0.39
TSPAN3-201ENST00000267970 CRIP1P50238 77 aa12.61□□□□□ -0.39
TSPAN3-201ENST00000267970 PRR15LQ9BU68 103 aa12.61□□□□□ -0.39
TSPAN3-201ENST00000267970 C11orf1Q9H5F2 150 aa12.6□□□□□ -0.39
TSPAN3-201ENST00000267970 K7EMT4 169 aa12.6□□□□□ -0.39
TSPAN3-201ENST00000267970 BRWD1-AS2P59051 145 aa12.6□□□□□ -0.39
TSPAN3-201ENST00000267970 ZNF22P17026 224 aaPredicted RBP12.6□□□□□ -0.39
TSPAN3-201ENST00000267970 RETNQ9HD89 108 aa12.6□□□□□ -0.39
TSPAN3-201ENST00000267970 IGLV2-18A0A075B6J9 118 aa12.59□□□□□ -0.39
TSPAN3-201ENST00000267970 IGLV4-3A0A075B6K6 122 aa12.59□□□□□ -0.39
TSPAN3-201ENST00000267970 ATRXP46100 2492 aa12.59□□□□□ -0.39
TSPAN3-201ENST00000267970 LOC100131303A0A0U1RQF7 123 aa12.59□□□□□ -0.39
TSPAN3-201ENST00000267970 M0R2N4 97 aa12.59□□□□□ -0.39
TSPAN3-201ENST00000267970 MED14OSP0DP75 135 aa12.59□□□□□ -0.39
TSPAN3-201ENST00000267970 RPL37AP8A6NKH3 93 aa12.58□□□□□ -0.39
TSPAN3-201ENST00000267970 CCKP06307 115 aa12.58□□□□□ -0.39
TSPAN3-201ENST00000267970 LINC00308Q8TCZ7 52 aa12.58□□□□□ -0.39
TSPAN3-201ENST00000267970 INSL3P51460 131 aa12.58□□□□□ -0.4
TSPAN3-201ENST00000267970 C6orf99Q4VX62 202 aa12.58□□□□□ -0.4
TSPAN3-201ENST00000267970 A6NDX4 124 aa12.57□□□□□ -0.4
TSPAN3-201ENST00000267970 CREBBPQ92793 2442 aa12.57□□□□□ -0.4
TSPAN3-201ENST00000267970 FREM1Q5H8C1 2179 aa12.57□□□□□ -0.4
TSPAN3-201ENST00000267970 Q6Q795 121 aa12.56□□□□□ -0.4
TSPAN3-201ENST00000267970 ZNF295-AS1Q8N0V1 137 aa12.56□□□□□ -0.4
TSPAN3-201ENST00000267970 GAS8-AS1O95177 125 aa12.56□□□□□ -0.4
TSPAN3-201ENST00000267970 WFDC10AQ9H1F0 79 aa12.56□□□□□ -0.4
TSPAN3-201ENST00000267970 C19orf84I3L1E1 186 aa12.56□□□□□ -0.4
TSPAN3-201ENST00000267970 RBX1P62877 108 aa12.56□□□□□ -0.4
TSPAN3-201ENST00000267970 PDE6GP18545 87 aa12.55□□□□□ -0.4
TSPAN3-201ENST00000267970 MYCNOSP40205 109 aa12.55□□□□□ -0.4
TSPAN3-201ENST00000267970 UFSP1Q6NVU6 142 aa12.55□□□□□ -0.4
TSPAN3-201ENST00000267970 MBD6Q96DN6 1003 aa12.55□□□□□ -0.4
TSPAN3-201ENST00000267970 CELA1Q9UNI1 258 aa12.55□□□□□ -0.4
TSPAN3-201ENST00000267970 C2orf16Q68DN1 1984 aa12.55□□□□□ -0.4
TSPAN3-201ENST00000267970 IGFL2Q6UWQ7 119 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms