RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 MRPL35Q9NZE8 188 aaKnown RBP8.22□□□□□ -1.09
SCAF11-201ENST00000266589 UQCR10Q9UDW1 63 aa8.22□□□□□ -1.09
SCAF11-201ENST00000266589 IGKCP01834 107 aa8.22□□□□□ -1.09
SCAF11-201ENST00000266589 RPL36AP83881 106 aaKnown RBP8.22□□□□□ -1.09
SCAF11-201ENST00000266589 LINC00612Q8N6U2 182 aa8.22□□□□□ -1.09
SCAF11-201ENST00000266589 RPL36ALQ969Q0 106 aaKnown RBP8.22□□□□□ -1.09
SCAF11-201ENST00000266589 TMEM141Q96I45 108 aa8.22□□□□□ -1.09
SCAF11-201ENST00000266589 G3V4G9 280 aa8.21□□□□□ -1.1
SCAF11-201ENST00000266589 DPM2O94777 84 aa8.21□□□□□ -1.1
SCAF11-201ENST00000266589 STPG4Q8N801 248 aa8.21□□□□□ -1.1
SCAF11-201ENST00000266589 IGHV4-28A0A0C4DH34 117 aa8.2□□□□□ -1.1
SCAF11-201ENST00000266589 GAGE12JA6NER3 117 aa8.2□□□□□ -1.1
SCAF11-201ENST00000266589 F8VRH5 84 aa8.2□□□□□ -1.1
SCAF11-201ENST00000266589 DEFB4AO15263 64 aa8.2□□□□□ -1.1
SCAF11-201ENST00000266589 GAGE1Q13065 139 aa8.2□□□□□ -1.1
SCAF11-201ENST00000266589 GAGE4Q13068 117 aa8.2□□□□□ -1.1
SCAF11-201ENST00000266589 GAGE5Q13069 117 aa8.2□□□□□ -1.1
SCAF11-201ENST00000266589 COTL1Q14019 142 aa8.2□□□□□ -1.1
SCAF11-201ENST00000266589 GAGE13Q4V321 117 aa8.2□□□□□ -1.1
SCAF11-201ENST00000266589 FAM222AQ5U5X8 452 aa8.2□□□□□ -1.1
SCAF11-201ENST00000266589 RNF183Q96D59 192 aa8.2□□□□□ -1.1
SCAF11-201ENST00000266589 CHTOPQ9Y3Y2 248 aaKnown RBP8.2□□□□□ -1.1
SCAF11-201ENST00000266589 PKD1L1Q8TDX9 2849 aa8.2□□□□□ -1.1
SCAF11-201ENST00000266589 CMYA5Q8N3K9 4069 aa8.2□□□□□ -1.1
SCAF11-201ENST00000266589 TRBV6-4A0A1B0GX49 114 aa8.2□□□□□ -1.1
SCAF11-201ENST00000266589 MIFP14174 115 aa8.2□□□□□ -1.1
SCAF11-201ENST00000266589 FHL2Q14192 279 aa8.2□□□□□ -1.1
SCAF11-201ENST00000266589 COL6A5A8TX70 2615 aa8.2□□□□□ -1.1
SCAF11-201ENST00000266589 NBEAL2Q6ZNJ1 2754 aa8.19□□□□□ -1.1
SCAF11-201ENST00000266589 PRSS29PA6NIE9 313 aa8.19□□□□□ -1.1
SCAF11-201ENST00000266589 LYRM9A8MSI8 78 aa8.19□□□□□ -1.1
SCAF11-201ENST00000266589 PLNP26678 52 aa8.19□□□□□ -1.1
SCAF11-201ENST00000266589 TCTAP57738 103 aa8.19□□□□□ -1.1
SCAF11-201ENST00000266589 UBE2D3P61077 147 aa8.19□□□□□ -1.1
SCAF11-201ENST00000266589 UBE2D2P62837 147 aa8.19□□□□□ -1.1
SCAF11-201ENST00000266589 Q8NAQ8 132 aa8.19□□□□□ -1.1
SCAF11-201ENST00000266589 CHCHD7Q9BUK0 85 aa8.19□□□□□ -1.1
SCAF11-201ENST00000266589 LOC100131303A0A0U1RQF7 123 aa8.18□□□□□ -1.1
SCAF11-201ENST00000266589 A8MZ25 164 aa8.18□□□□□ -1.1
SCAF11-201ENST00000266589 PMVKQ15126 192 aa8.18□□□□□ -1.1
SCAF11-201ENST00000266589 ZC2HC1BQ5TFG8 222 aa8.18□□□□□ -1.1
SCAF11-201ENST00000266589 TP73-AS1Q9UF72 201 aa8.18□□□□□ -1.1
SCAF11-201ENST00000266589 HHLA3Q9XRX5 114 aa8.18□□□□□ -1.1
SCAF11-201ENST00000266589 DAZ4Q86SG3 579 aaKnown RBP8.18□□□□□ -1.1
SCAF11-201ENST00000266589 OPRPNQ99935 248 aaPredicted RBP8.18□□□□□ -1.1
SCAF11-201ENST00000266589 DAZ3Q9NR90 486 aaKnown RBP8.18□□□□□ -1.1
SCAF11-201ENST00000266589 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.17□□□□□ -1.1
SCAF11-201ENST00000266589 TMEM238LA0A1B0GVL6 79 aa8.17□□□□□ -1.1
SCAF11-201ENST00000266589 IGKV2-29A2NJV5 120 aaPredicted RBP8.17□□□□□ -1.1
SCAF11-201ENST00000266589 HNRNPA3P51991 378 aaKnown RBP8.17□□□□□ -1.1
SCAF11-201ENST00000266589 PRADC1Q9BSG0 188 aa8.17□□□□□ -1.1
SCAF11-201ENST00000266589 CST9LQ9H4G1 147 aa8.17□□□□□ -1.1
SCAF11-201ENST00000266589 IGLV4-3A0A075B6K6 122 aa8.17□□□□□ -1.1
SCAF11-201ENST00000266589 SAMD5Q5TGI4 173 aa8.17□□□□□ -1.1
SCAF11-201ENST00000266589 SLC25A34Q6PIV7 304 aa8.17□□□□□ -1.1
SCAF11-201ENST00000266589 PYGO1Q9Y3Y4 419 aa8.17□□□□□ -1.1
SCAF11-201ENST00000266589 COX8AP10176 69 aa8.16□□□□□ -1.1
SCAF11-201ENST00000266589 CEMP1Q6PRD7 247 aaPredicted RBP8.16□□□□□ -1.1
SCAF11-201ENST00000266589 CELA1Q9UNI1 258 aa8.16□□□□□ -1.1
SCAF11-201ENST00000266589 NMUP48645 174 aa8.15□□□□□ -1.1
SCAF11-201ENST00000266589 UBE2D4Q9Y2X8 147 aa8.15□□□□□ -1.1
SCAF11-201ENST00000266589 IGLV4-69A0A075B6H9 119 aa8.15□□□□□ -1.11
SCAF11-201ENST00000266589 DAD1P61803 113 aa8.15□□□□□ -1.11
SCAF11-201ENST00000266589 PAPPA-AS1Q5QFB9 102 aa8.15□□□□□ -1.11
SCAF11-201ENST00000266589 NTM-AS1Q6ZSK4 140 aa8.15□□□□□ -1.11
SCAF11-201ENST00000266589 RETNQ9HD89 108 aa8.15□□□□□ -1.11
SCAF11-201ENST00000266589 SPANXA1Q9NS26 97 aa8.15□□□□□ -1.11
SCAF11-201ENST00000266589 IGKV2D-26A0A0A0MRZ7 120 aa8.14□□□□□ -1.11
SCAF11-201ENST00000266589 VCX2Q9H322 139 aa8.14□□□□□ -1.11
SCAF11-201ENST00000266589 ANK2Q01484 3957 aa8.14□□□□□ -1.11
SCAF11-201ENST00000266589 SPART-AS1P0CW21 52 aa8.14□□□□□ -1.11
SCAF11-201ENST00000266589 LINC00694P0DN24 101 aa8.14□□□□□ -1.11
SCAF11-201ENST00000266589 CRYBA4P53673 196 aa8.14□□□□□ -1.11
SCAF11-201ENST00000266589 FAM104AQ969W3 186 aa8.14□□□□□ -1.11
SCAF11-201ENST00000266589 MDFIQ99750 246 aa8.14□□□□□ -1.11
SCAF11-201ENST00000266589 C11orf86A6NJI1 115 aa8.13□□□□□ -1.11
SCAF11-201ENST00000266589 EREGO14944 169 aa8.13□□□□□ -1.11
SCAF11-201ENST00000266589 NPSP0C0P6 89 aa8.13□□□□□ -1.11
SCAF11-201ENST00000266589 FGF6P10767 208 aa8.13□□□□□ -1.11
SCAF11-201ENST00000266589 GTSF1LQ9H1H1 148 aa8.13□□□□□ -1.11
SCAF11-201ENST00000266589 PRO0255Q9UI72 69 aa8.13□□□□□ -1.11
SCAF11-201ENST00000266589 M0R143 59 aa8.12□□□□□ -1.11
SCAF11-201ENST00000266589 GYPEP15421 78 aa8.12□□□□□ -1.11
SCAF11-201ENST00000266589 RNASE13Q5GAN3 156 aaKnown RBP8.12□□□□□ -1.11
SCAF11-201ENST00000266589 Q6ZUT4 128 aa8.12□□□□□ -1.11
SCAF11-201ENST00000266589 PCP2Q8IVA1 136 aa8.12□□□□□ -1.11
SCAF11-201ENST00000266589 AMELXQ99217 191 aa8.12□□□□□ -1.11
SCAF11-201ENST00000266589 SNHG12Q9BXW3 62 aa8.12□□□□□ -1.11
SCAF11-201ENST00000266589 MRPS16Q9Y3D3 137 aaKnown RBP8.12□□□□□ -1.11
SCAF11-201ENST00000266589 DNAH3Q8TD57 4116 aa8.12□□□□□ -1.11
SCAF11-201ENST00000266589 SBSPONQ8IVN8 264 aa8.12□□□□□ -1.11
SCAF11-201ENST00000266589 BOD1L2Q8IYS8 172 aa8.12□□□□□ -1.11
SCAF11-201ENST00000266589 ATP5G1P05496 136 aa8.11□□□□□ -1.11
SCAF11-201ENST00000266589 MRPL52Q86TS9 123 aaKnown RBP8.11□□□□□ -1.11
SCAF11-201ENST00000266589 TMEM243Q9BU79 118 aa8.11□□□□□ -1.11
SCAF11-201ENST00000266589 CHAC1Q9BUX1 264 aa8.11□□□□□ -1.11
SCAF11-201ENST00000266589 TIMM21Q9BVV7 248 aa8.11□□□□□ -1.11
SCAF11-201ENST00000266589 TRBV25-1A0A075B6N4 114 aa8.1□□□□□ -1.11
SCAF11-201ENST00000266589 PAX4O43316 350 aa8.1□□□□□ -1.11
SCAF11-201ENST00000266589 PRB2P02812 416 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 144.2 ms