RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 C20orf173Q96LM9 149 aa11.59□□□□□ -0.55
TIMP3-201ENST00000266085 ZNF702PQ9H963 129 aa11.59□□□□□ -0.55
TIMP3-201ENST00000266085 A4D1N5 150 aa11.59□□□□□ -0.55
TIMP3-201ENST00000266085 GDF5OSQ5U4N7 250 aa11.59□□□□□ -0.55
TIMP3-201ENST00000266085 Q6ZVH6 145 aa11.59□□□□□ -0.55
TIMP3-201ENST00000266085 LINC01006Q8NI28 216 aa11.59□□□□□ -0.55
TIMP3-201ENST00000266085 TP53TG3Q9ULZ0 132 aa11.59□□□□□ -0.55
TIMP3-201ENST00000266085 SND1-IT1Q9HBX3 110 aa11.58□□□□□ -0.56
TIMP3-201ENST00000266085 Q6ZTI0 123 aa11.58□□□□□ -0.56
TIMP3-201ENST00000266085 EML5Q05BV3 1969 aa11.57□□□□□ -0.56
TIMP3-201ENST00000266085 CCL25O15444 150 aa11.57□□□□□ -0.56
TIMP3-201ENST00000266085 ZFAND2AQ8N6M9 145 aa11.57□□□□□ -0.56
TIMP3-201ENST00000266085 COX7B2Q8TF08 81 aa11.57□□□□□ -0.56
TIMP3-201ENST00000266085 UBL5Q9BZL1 73 aa11.57□□□□□ -0.56
TIMP3-201ENST00000266085 MUSTN1Q8IVN3 82 aa11.57□□□□□ -0.56
TIMP3-201ENST00000266085 HIGD1BQ9P298 99 aa11.57□□□□□ -0.56
TIMP3-201ENST00000266085 SPATA12Q7Z6I5 190 aa11.56□□□□□ -0.56
TIMP3-201ENST00000266085 ATG2AQ2TAZ0 1938 aa11.56□□□□□ -0.56
TIMP3-201ENST00000266085 CRIP1P50238 77 aa11.56□□□□□ -0.56
TIMP3-201ENST00000266085 ANKRD17O75179 2603 aaKnown RBP11.56□□□□□ -0.56
TIMP3-201ENST00000266085 NTN5Q8WTR8 489 aaPredicted RBP11.55□□□□□ -0.56
TIMP3-201ENST00000266085 KLK12Q9UKR0 248 aa11.55□□□□□ -0.56
TIMP3-201ENST00000266085 RPL32P62910 135 aaKnown RBP11.55□□□□□ -0.56
TIMP3-201ENST00000266085 IGLL5B9A064 214 aa11.55□□□□□ -0.56
TIMP3-201ENST00000266085 FXYD2P54710 66 aa11.55□□□□□ -0.56
TIMP3-201ENST00000266085 UBE2BP63146 152 aa11.55□□□□□ -0.56
TIMP3-201ENST00000266085 OPRPNQ99935 248 aaPredicted RBP11.55□□□□□ -0.56
TIMP3-201ENST00000266085 RANBP2P49792 3224 aaKnown RBP11.54□□□□□ -0.56
TIMP3-201ENST00000266085 DSCR8Q96T75 97 aa11.54□□□□□ -0.56
TIMP3-201ENST00000266085 HAMPP81172 84 aa11.53□□□□□ -0.56
TIMP3-201ENST00000266085 F8W735 103 aaPredicted RBP11.53□□□□□ -0.56
TIMP3-201ENST00000266085 P0DMU3 169 aa11.53□□□□□ -0.56
TIMP3-201ENST00000266085 FAM231AP0DMU4 169 aa11.53□□□□□ -0.56
TIMP3-201ENST00000266085 FAM231CP0DMU5 169 aa11.53□□□□□ -0.56
TIMP3-201ENST00000266085 CHD7Q9P2D1 2997 aa11.53□□□□□ -0.56
TIMP3-201ENST00000266085 HILS1P60008 231 aa11.53□□□□□ -0.56
TIMP3-201ENST00000266085 CEMP1Q6PRD7 247 aaPredicted RBP11.53□□□□□ -0.56
TIMP3-201ENST00000266085 DAND5Q8N907 189 aa11.52□□□□□ -0.56
TIMP3-201ENST00000266085 C18orf65Q6ZTR6 163 aa11.52□□□□□ -0.57
TIMP3-201ENST00000266085 IGHV1-58A0A0C4DH39 117 aa11.52□□□□□ -0.57
TIMP3-201ENST00000266085 IGLV1-40P01703 118 aa11.52□□□□□ -0.57
TIMP3-201ENST00000266085 SMIM9A6NGZ8 99 aa11.52□□□□□ -0.57
TIMP3-201ENST00000266085 IGLV2-11P01706 119 aa11.52□□□□□ -0.57
TIMP3-201ENST00000266085 FAM222AQ5U5X8 452 aa11.52□□□□□ -0.57
TIMP3-201ENST00000266085 NDUFA1O15239 70 aa11.51□□□□□ -0.57
TIMP3-201ENST00000266085 LINC00482Q8N8I6 264 aa11.51□□□□□ -0.57
TIMP3-201ENST00000266085 Q6ZUT4 128 aa11.51□□□□□ -0.57
TIMP3-201ENST00000266085 BBC3Q96PG8 261 aaPredicted RBP11.51□□□□□ -0.57
TIMP3-201ENST00000266085 BAALC-AS2P0C853 105 aa11.51□□□□□ -0.57
TIMP3-201ENST00000266085 H0YGX0 51 aa11.5□□□□□ -0.57
TIMP3-201ENST00000266085 RPL18AQ02543 176 aaKnown RBP11.5□□□□□ -0.57
TIMP3-201ENST00000266085 SPAG11BQ08648 103 aa11.5□□□□□ -0.57
TIMP3-201ENST00000266085 SMR3AQ99954 134 aa11.5□□□□□ -0.57
TIMP3-201ENST00000266085 TINCRA0A1B0GVN0 87 aa11.5□□□□□ -0.57
TIMP3-201ENST00000266085 CXCL5P42830 114 aa11.5□□□□□ -0.57
TIMP3-201ENST00000266085 ORMDL1Q9P0S3 153 aa11.49□□□□□ -0.57
TIMP3-201ENST00000266085 SHISA2Q6UWI4 295 aa11.49□□□□□ -0.57
TIMP3-201ENST00000266085 EXPH5Q8NEV8 1989 aa11.48□□□□□ -0.57
TIMP3-201ENST00000266085 TRAV26-1A0A087WT03 109 aa11.48□□□□□ -0.57
TIMP3-201ENST00000266085 ETDCA0A1B0GVM5 59 aa11.48□□□□□ -0.57
TIMP3-201ENST00000266085 CPAMD8Q8IZJ3 1885 aa11.47□□□□□ -0.57
TIMP3-201ENST00000266085 LYRM9A8MSI8 78 aa11.47□□□□□ -0.57
TIMP3-201ENST00000266085 PKIGQ9Y2B9 76 aa11.47□□□□□ -0.57
TIMP3-201ENST00000266085 GAGE12HA6NDE8 117 aa11.47□□□□□ -0.57
TIMP3-201ENST00000266085 C11orf45Q8TAV5 145 aa11.47□□□□□ -0.57
TIMP3-201ENST00000266085 MIR7-3HGQ8N6C7 128 aa11.46□□□□□ -0.57
TIMP3-201ENST00000266085 ANKRD29Q8N6D5 301 aa11.46□□□□□ -0.57
TIMP3-201ENST00000266085 HECTD1Q9ULT8 2610 aa11.46□□□□□ -0.58
TIMP3-201ENST00000266085 YPEL4Q96NS1 127 aa11.46□□□□□ -0.58
TIMP3-201ENST00000266085 TM2D2Q9BX73 214 aa11.46□□□□□ -0.58
TIMP3-201ENST00000266085 M0QY20 66 aa11.45□□□□□ -0.58
TIMP3-201ENST00000266085 RBMY1FQ15415 496 aaKnown RBP11.45□□□□□ -0.58
TIMP3-201ENST00000266085 IGHV4-4A0A075B6R2 117 aa11.44□□□□□ -0.58
TIMP3-201ENST00000266085 WFDC10AQ9H1F0 79 aa11.44□□□□□ -0.58
TIMP3-201ENST00000266085 RAI1Q7Z5J4 1906 aaPredicted RBP11.44□□□□□ -0.58
TIMP3-201ENST00000266085 KLLNB2CW77 178 aa11.44□□□□□ -0.58
TIMP3-201ENST00000266085 CFAP126Q5VTH2 177 aa11.44□□□□□ -0.58
TIMP3-201ENST00000266085 DEFB105AQ8NG35 78 aa11.44□□□□□ -0.58
TIMP3-201ENST00000266085 RNF185Q96GF1 192 aa11.44□□□□□ -0.58
TIMP3-201ENST00000266085 LINC00467Q9BRT7 94 aa11.44□□□□□ -0.58
TIMP3-201ENST00000266085 F8P00451 2351 aa11.43□□□□□ -0.58
TIMP3-201ENST00000266085 LINC01620Q4KN68 170 aa11.43□□□□□ -0.58
TIMP3-201ENST00000266085 TAX1BP3O14907 124 aa11.43□□□□□ -0.58
TIMP3-201ENST00000266085 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.43□□□□□ -0.58
TIMP3-201ENST00000266085 NEXN-AS1Q8NBZ9 246 aa11.43□□□□□ -0.58
TIMP3-201ENST00000266085 C11orf21Q9P2W6 132 aa11.43□□□□□ -0.58
TIMP3-201ENST00000266085 RNASE3P12724 160 aaKnown RBP11.42□□□□□ -0.58
TIMP3-201ENST00000266085 DCANP1Q8TF63 244 aa11.42□□□□□ -0.58
TIMP3-201ENST00000266085 KLK5Q9Y337 293 aaPredicted RBP11.42□□□□□ -0.58
TIMP3-201ENST00000266085 FAM110AQ9BQ89 295 aa11.42□□□□□ -0.58
TIMP3-201ENST00000266085 TIRAPP58753 221 aa11.42□□□□□ -0.58
TIMP3-201ENST00000266085 CDKN2A-AS1Q9UH64 79 aa11.42□□□□□ -0.58
TIMP3-201ENST00000266085 PRR9Q5T870 116 aa11.42□□□□□ -0.58
TIMP3-201ENST00000266085 LINC00269Q8N2A0 174 aa11.42□□□□□ -0.58
TIMP3-201ENST00000266085 C15orf53Q8NAA6 179 aa11.41□□□□□ -0.58
TIMP3-201ENST00000266085 MIFP14174 115 aa11.41□□□□□ -0.58
TIMP3-201ENST00000266085 CRYBA4P53673 196 aa11.41□□□□□ -0.58
TIMP3-201ENST00000266085 IGLV4-3A0A075B6K6 122 aa11.41□□□□□ -0.58
TIMP3-201ENST00000266085 TRBV27A0A0K0K1C4 114 aa11.41□□□□□ -0.58
TIMP3-201ENST00000266085 COL4A2P08572 1712 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms