RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 NDUFA4O00483 81 aa9.74□□□□□ -0.85
NUP54-201ENST00000264883 IGHV3-30-3P0DP02 117 aa9.74□□□□□ -0.85
NUP54-201ENST00000264883 PF4V1P10720 104 aa9.74□□□□□ -0.85
NUP54-201ENST00000264883 CRYGAP11844 174 aa9.74□□□□□ -0.85
NUP54-201ENST00000264883 ZFP36P26651 326 aaKnown RBP9.74□□□□□ -0.85
NUP54-201ENST00000264883 RNASE4P34096 147 aaKnown RBP9.74□□□□□ -0.85
NUP54-201ENST00000264883 ADAMTSL4-AS1Q5T5F5 129 aa9.74□□□□□ -0.85
NUP54-201ENST00000264883 C5orf56Q8N8D9 126 aa9.74□□□□□ -0.85
NUP54-201ENST00000264883 C20orf173Q96LM9 149 aa9.74□□□□□ -0.85
NUP54-201ENST00000264883 UBR5O95071 2799 aaPredicted RBP9.74□□□□□ -0.85
NUP54-201ENST00000264883 TRBV27A0A0K0K1C4 114 aa9.73□□□□□ -0.85
NUP54-201ENST00000264883 G3V318 75 aa9.73□□□□□ -0.85
NUP54-201ENST00000264883 NPC2P61916 151 aa9.73□□□□□ -0.85
NUP54-201ENST00000264883 DCANP1Q8TF63 244 aa9.73□□□□□ -0.85
NUP54-201ENST00000264883 SOCS3O14543 225 aa9.73□□□□□ -0.85
NUP54-201ENST00000264883 SAA4P35542 130 aa9.73□□□□□ -0.85
NUP54-201ENST00000264883 CXCL5P42830 114 aa9.73□□□□□ -0.85
NUP54-201ENST00000264883 C19orf54Q5BKX5 351 aa9.73□□□□□ -0.85
NUP54-201ENST00000264883 C2orf48Q96LS8 159 aa9.73□□□□□ -0.85
NUP54-201ENST00000264883 DUX5Q96PT3 197 aa9.73□□□□□ -0.85
NUP54-201ENST00000264883 TIMM21Q9BVV7 248 aa9.73□□□□□ -0.85
NUP54-201ENST00000264883 A0A087WWL8 130 aa9.72□□□□□ -0.85
NUP54-201ENST00000264883 TRAV41A0A0B4J266 112 aa9.72□□□□□ -0.85
NUP54-201ENST00000264883 MIAQ16674 131 aa9.72□□□□□ -0.85
NUP54-201ENST00000264883 JPT2Q9H910 190 aa9.72□□□□□ -0.85
NUP54-201ENST00000264883 MOB4Q9Y3A3 225 aa9.72□□□□□ -0.85
NUP54-201ENST00000264883 H3BUA1 57 aa9.72□□□□□ -0.85
NUP54-201ENST00000264883 C5orf38Q86SI9 138 aa9.72□□□□□ -0.85
NUP54-201ENST00000264883 TMEM61Q8N0U2 210 aa9.72□□□□□ -0.85
NUP54-201ENST00000264883 FAM208BQ5VWN6 2430 aa9.71□□□□□ -0.86
NUP54-201ENST00000264883 NSUN5P1Q3KNT7 163 aa9.71□□□□□ -0.86
NUP54-201ENST00000264883 MUC4Q99102 2169 aa9.7□□□□□ -0.86
NUP54-201ENST00000264883 TRBV6-5A0A0K0K1A5 114 aa9.7□□□□□ -0.86
NUP54-201ENST00000264883 hADV29S1A0JD25 119 aa9.7□□□□□ -0.86
NUP54-201ENST00000264883 TRACP01848 142 aa9.7□□□□□ -0.86
NUP54-201ENST00000264883 RHOHQ15669 191 aa9.7□□□□□ -0.86
NUP54-201ENST00000264883 USMG5Q96IX5 58 aa9.7□□□□□ -0.86
NUP54-201ENST00000264883 DEFB1P60022 68 aa9.7□□□□□ -0.86
NUP54-201ENST00000264883 SDIM1Q6ZPB5 146 aa9.7□□□□□ -0.86
NUP54-201ENST00000264883 ATOX1O00244 68 aa9.69□□□□□ -0.86
NUP54-201ENST00000264883 PEMTQ9UBM1 199 aa9.69□□□□□ -0.86
NUP54-201ENST00000264883 NDUFA12Q9UI09 145 aa9.69□□□□□ -0.86
NUP54-201ENST00000264883 PLA2G2AP14555 144 aa9.68□□□□□ -0.86
NUP54-201ENST00000264883 LRRK2Q5S007 2527 aa9.68□□□□□ -0.86
NUP54-201ENST00000264883 AKAP6Q13023 2319 aa9.68□□□□□ -0.86
NUP54-201ENST00000264883 IGLV4-3A0A075B6K6 122 aa9.68□□□□□ -0.86
NUP54-201ENST00000264883 J3QKU1 62 aa9.68□□□□□ -0.86
NUP54-201ENST00000264883 FAM74A4Q5TZK3 123 aa9.67□□□□□ -0.86
NUP54-201ENST00000264883 C20orf203Q8NBC4 194 aa9.67□□□□□ -0.86
NUP54-201ENST00000264883 TACC2O95359 2948 aa9.67□□□□□ -0.86
NUP54-201ENST00000264883 UTP20O75691 2785 aaKnown RBP9.67□□□□□ -0.86
NUP54-201ENST00000264883 TRAV12-3A0A0B4J271 114 aa9.67□□□□□ -0.86
NUP54-201ENST00000264883 IGHV1-58A0A0C4DH39 117 aa9.67□□□□□ -0.86
NUP54-201ENST00000264883 KLLNB2CW77 178 aa9.67□□□□□ -0.86
NUP54-201ENST00000264883 HIST1H4AP62805 103 aaKnown RBP9.67□□□□□ -0.86
NUP54-201ENST00000264883 DPH3Q96FX2 82 aa9.67□□□□□ -0.86
NUP54-201ENST00000264883 PRRC2AP48634 2157 aaKnown RBP9.66□□□□□ -0.86
NUP54-201ENST00000264883 DAZ2Q13117 558 aaKnown RBP9.66□□□□□ -0.86
NUP54-201ENST00000264883 DAZ4Q86SG3 579 aaKnown RBP9.66□□□□□ -0.86
NUP54-201ENST00000264883 CYSTM1Q9H1C7 97 aa9.66□□□□□ -0.86
NUP54-201ENST00000264883 DAZ1Q9NQZ3 744 aaKnown RBP9.66□□□□□ -0.86
NUP54-201ENST00000264883 DAZ3Q9NR90 486 aaKnown RBP9.66□□□□□ -0.86
NUP54-201ENST00000264883 CSMD1Q96PZ7 3565 aa9.66□□□□□ -0.86
NUP54-201ENST00000264883 CHD6Q8TD26 2715 aa9.66□□□□□ -0.86
NUP54-201ENST00000264883 WNK2Q9Y3S1 2297 aa9.66□□□□□ -0.86
NUP54-201ENST00000264883 TMEM258P61165 79 aa9.66□□□□□ -0.86
NUP54-201ENST00000264883 RPL11P62913 178 aaKnown RBP9.66□□□□□ -0.86
NUP54-201ENST00000264883 KIR2DL5BQ8NHK3 375 aa9.66□□□□□ -0.86
NUP54-201ENST00000264883 F6UB75 175 aa9.65□□□□□ -0.87
NUP54-201ENST00000264883 COX7A2LO14548 114 aa9.65□□□□□ -0.87
NUP54-201ENST00000264883 UNQ9165/PRO28630Q6UXU0 137 aa9.65□□□□□ -0.87
NUP54-201ENST00000264883 M0QY20 66 aa9.64□□□□□ -0.87
NUP54-201ENST00000264883 LMO4P61968 165 aa9.64□□□□□ -0.87
NUP54-201ENST00000264883 MRPS36P82909 103 aaKnown RBP9.64□□□□□ -0.87
NUP54-201ENST00000264883 CITED2Q99967 270 aaPredicted RBP9.64□□□□□ -0.87
NUP54-201ENST00000264883 ASH1LQ9NR48 2969 aaKnown RBP9.64□□□□□ -0.87
NUP54-201ENST00000264883 TIRAPP58753 221 aa9.64□□□□□ -0.87
NUP54-201ENST00000264883 DAND5Q8N907 189 aa9.64□□□□□ -0.87
NUP54-201ENST00000264883 VSIG2Q96IQ7 327 aa9.64□□□□□ -0.87
NUP54-201ENST00000264883 A8MZ25 164 aa9.63□□□□□ -0.87
NUP54-201ENST00000264883 CD28P10747 220 aa9.63□□□□□ -0.87
NUP54-201ENST00000264883 K7EMT4 169 aa9.63□□□□□ -0.87
NUP54-201ENST00000264883 BAALC-AS2P0C853 105 aa9.63□□□□□ -0.87
NUP54-201ENST00000264883 F5H768 121 aa9.62□□□□□ -0.87
NUP54-201ENST00000264883 TIMM17BO60830 172 aa9.62□□□□□ -0.87
NUP54-201ENST00000264883 RPL18AQ02543 176 aaKnown RBP9.62□□□□□ -0.87
NUP54-201ENST00000264883 C4orf26Q17RF5 130 aa9.62□□□□□ -0.87
NUP54-201ENST00000264883 CRYBG3Q68DQ2 2970 aa9.62□□□□□ -0.87
NUP54-201ENST00000264883 TRAV13-1A0A0B4J241 112 aa9.61□□□□□ -0.87
NUP54-201ENST00000264883 RHPN1-AS1Q9BWJ2 59 aa9.61□□□□□ -0.87
NUP54-201ENST00000264883 OXTP01178 125 aa9.61□□□□□ -0.87
NUP54-201ENST00000264883 IGHG2P01859 326 aa9.61□□□□□ -0.87
NUP54-201ENST00000264883 INAFM2P0DMQ5 153 aa9.61□□□□□ -0.87
NUP54-201ENST00000264883 C9orf85Q96MD7 179 aa9.61□□□□□ -0.87
NUP54-201ENST00000264883 DSCR8Q96T75 97 aa9.61□□□□□ -0.87
NUP54-201ENST00000264883 TRBV12-3P01733 135 aa9.6□□□□□ -0.87
NUP54-201ENST00000264883 SPG11Q96JI7 2443 aa9.6□□□□□ -0.87
NUP54-201ENST00000264883 BEAN1Q3B7T3 259 aa9.6□□□□□ -0.87
NUP54-201ENST00000264883 HRCT1Q6UXD1 115 aa9.59□□□□□ -0.87
NUP54-201ENST00000264883 SERP2Q8N6R1 65 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms