RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 CYSLTR1Q9Y271 337 aa16.11■□□□□ 0.17
SMARCB1-201ENST00000263121 ATP5LO75964 103 aa16.11■□□□□ 0.17
SMARCB1-201ENST00000263121 CRYBA4P53673 196 aa16.11■□□□□ 0.17
SMARCB1-201ENST00000263121 IGHV3-38A0A0C4DH36 116 aa16.1■□□□□ 0.17
SMARCB1-201ENST00000263121 LINC01549A6NIU2 74 aa16.1■□□□□ 0.17
SMARCB1-201ENST00000263121 ATP5G1P05496 136 aa16.1■□□□□ 0.17
SMARCB1-201ENST00000263121 LINC00694P0DN24 101 aa16.1■□□□□ 0.17
SMARCB1-201ENST00000263121 DAZ4Q86SG3 579 aaKnown RBP16.1■□□□□ 0.17
SMARCB1-201ENST00000263121 DAZ3Q9NR90 486 aaKnown RBP16.1■□□□□ 0.17
SMARCB1-201ENST00000263121 PRO0255Q9UI72 69 aa16.1■□□□□ 0.17
SMARCB1-201ENST00000263121 COTL1Q14019 142 aa16.08■□□□□ 0.17
SMARCB1-201ENST00000263121 C20orf203Q8NBC4 194 aa16.08■□□□□ 0.17
SMARCB1-201ENST00000263121 SCGB3A1Q96QR1 104 aa16.08■□□□□ 0.17
SMARCB1-201ENST00000263121 RPL39P62891 51 aaKnown RBP16.08■□□□□ 0.16
SMARCB1-201ENST00000263121 MRAPQ8TCY5 172 aa16.08■□□□□ 0.16
SMARCB1-201ENST00000263121 H0Y8G0 127 aa16.07■□□□□ 0.16
SMARCB1-201ENST00000263121 C12orf74Q32Q52 190 aa16.07■□□□□ 0.16
SMARCB1-201ENST00000263121 LINC01545Q5VT33 79 aa16.07■□□□□ 0.16
SMARCB1-201ENST00000263121 ERASQ7Z444 233 aa16.07■□□□□ 0.16
SMARCB1-201ENST00000263121 CHCHD7Q9BUK0 85 aa16.07■□□□□ 0.16
SMARCB1-201ENST00000263121 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.06■□□□□ 0.16
SMARCB1-201ENST00000263121 TEX43Q6ZNM6 134 aa16.06■□□□□ 0.16
SMARCB1-201ENST00000263121 A0A0J9YWU9 116 aa16.05■□□□□ 0.16
SMARCB1-201ENST00000263121 C20orf202A1L168 122 aa16.05■□□□□ 0.16
SMARCB1-201ENST00000263121 IGIPA6NJ69 53 aa16.05■□□□□ 0.16
SMARCB1-201ENST00000263121 ZMAT4Q9H898 229 aa16.05■□□□□ 0.16
SMARCB1-201ENST00000263121 DNHD1Q96M86 4753 aa16.05■□□□□ 0.16
SMARCB1-201ENST00000263121 GYPEP15421 78 aa16.04■□□□□ 0.16
SMARCB1-201ENST00000263121 LGALS9CQ6DKI2 356 aa16.04■□□□□ 0.16
SMARCB1-201ENST00000263121 TIMM17AQ99595 171 aa16.04■□□□□ 0.16
SMARCB1-201ENST00000263121 PAX4O43316 350 aa16.03■□□□□ 0.16
SMARCB1-201ENST00000263121 VSIG2Q96IQ7 327 aa16.03■□□□□ 0.16
SMARCB1-201ENST00000263121 PRSS1P07477 247 aa16.02■□□□□ 0.16
SMARCB1-201ENST00000263121 NTM-AS1Q6ZSK4 140 aa16.02■□□□□ 0.16
SMARCB1-201ENST00000263121 GTSF1LQ9H1H1 148 aa16.02■□□□□ 0.16
SMARCB1-201ENST00000263121 F5H768 121 aa16.02■□□□□ 0.15
SMARCB1-201ENST00000263121 Q6ZN92 141 aa16.02■□□□□ 0.15
SMARCB1-201ENST00000263121 TMEM141Q96I45 108 aa16.02■□□□□ 0.15
SMARCB1-201ENST00000263121 S100A12P80511 92 aa16.01■□□□□ 0.15
SMARCB1-201ENST00000263121 BAALCQ8WXS3 180 aa16.01■□□□□ 0.15
SMARCB1-201ENST00000263121 ODF1Q14990 250 aa16■□□□□ 0.15
SMARCB1-201ENST00000263121 PMCHL2Q9BQD1 86 aa16■□□□□ 0.15
SMARCB1-201ENST00000263121 HTN3P15516 51 aa15.99■□□□□ 0.15
SMARCB1-201ENST00000263121 ATOH7Q8N100 152 aa15.99■□□□□ 0.15
SMARCB1-201ENST00000263121 TENM3Q9P273 2699 aa15.99■□□□□ 0.15
SMARCB1-201ENST00000263121 TRAV26-1A0A087WT03 109 aa15.99■□□□□ 0.15
SMARCB1-201ENST00000263121 TRAV12-1A0A0B4J245 112 aa15.99■□□□□ 0.15
SMARCB1-201ENST00000263121 PYGO1Q9Y3Y4 419 aa15.99■□□□□ 0.15
SMARCB1-201ENST00000263121 HUWE1Q7Z6Z7 4374 aaKnown RBP15.98■□□□□ 0.15
SMARCB1-201ENST00000263121 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.98■□□□□ 0.15
SMARCB1-201ENST00000263121 A0A0J9YY99 117 aa15.98■□□□□ 0.15
SMARCB1-201ENST00000263121 IGKV2-29A2NJV5 120 aaPredicted RBP15.98■□□□□ 0.15
SMARCB1-201ENST00000263121 Q6ZTC4 211 aa15.97■□□□□ 0.15
SMARCB1-201ENST00000263121 ATP6V0E2Q8NHE4 81 aa15.97■□□□□ 0.15
SMARCB1-201ENST00000263121 A0A087WX48 190 aa15.96■□□□□ 0.15
SMARCB1-201ENST00000263121 C11orf45Q8TAV5 145 aa15.96■□□□□ 0.15
SMARCB1-201ENST00000263121 B9D2Q9BPU9 175 aa15.96■□□□□ 0.15
SMARCB1-201ENST00000263121 VAMP8Q9BV40 100 aa15.96■□□□□ 0.15
SMARCB1-201ENST00000263121 UBE2D4Q9Y2X8 147 aa15.96■□□□□ 0.15
SMARCB1-201ENST00000263121 TMEM97Q5BJF2 176 aa15.95■□□□□ 0.14
SMARCB1-201ENST00000263121 SPANXA1Q9NS26 97 aa15.95■□□□□ 0.14
SMARCB1-201ENST00000263121 NPSP0C0P6 89 aa15.95■□□□□ 0.14
SMARCB1-201ENST00000263121 ZNF664Q8N3J9 261 aa15.95■□□□□ 0.14
SMARCB1-201ENST00000263121 FAM104AQ969W3 186 aa15.95■□□□□ 0.14
SMARCB1-201ENST00000263121 IGLV4-3A0A075B6K6 122 aa15.94■□□□□ 0.14
SMARCB1-201ENST00000263121 TRBV6-8A0A0A6YYG3 113 aa15.94■□□□□ 0.14
SMARCB1-201ENST00000263121 NANOS2P60321 138 aaKnown RBP15.94■□□□□ 0.14
SMARCB1-201ENST00000263121 OPRPNQ99935 248 aaPredicted RBP15.94■□□□□ 0.14
SMARCB1-201ENST00000263121 TRBV25-1A0A075B6N4 114 aa15.93■□□□□ 0.14
SMARCB1-201ENST00000263121 TRAV9-2A0A087WT02 112 aa15.93■□□□□ 0.14
SMARCB1-201ENST00000263121 TMEM243Q9BU79 118 aa15.93■□□□□ 0.14
SMARCB1-201ENST00000263121 TIMM21Q9BVV7 248 aa15.93■□□□□ 0.14
SMARCB1-201ENST00000263121 PRSS29PA6NIE9 313 aa15.92■□□□□ 0.14
SMARCB1-201ENST00000263121 PMVKQ15126 192 aa15.92■□□□□ 0.14
SMARCB1-201ENST00000263121 MAJINQ3KP22 176 aa15.92■□□□□ 0.14
SMARCB1-201ENST00000263121 CEMP1Q6PRD7 247 aaPredicted RBP15.92■□□□□ 0.14
SMARCB1-201ENST00000263121 MRPL35Q9NZE8 188 aaKnown RBP15.92■□□□□ 0.14
SMARCB1-201ENST00000263121 PAM16Q9Y3D7 125 aa15.92■□□□□ 0.14
SMARCB1-201ENST00000263121 CST9LQ9H4G1 147 aa15.92■□□□□ 0.14
SMARCB1-201ENST00000263121 F8VRH5 84 aa15.91■□□□□ 0.14
SMARCB1-201ENST00000263121 ZC2HC1BQ5TFG8 222 aa15.91■□□□□ 0.14
SMARCB1-201ENST00000263121 MRPL52Q86TS9 123 aaKnown RBP15.91■□□□□ 0.14
SMARCB1-201ENST00000263121 CHTOPQ9Y3Y2 248 aaKnown RBP15.91■□□□□ 0.14
SMARCB1-201ENST00000263121 H3BNG1 76 aa15.9■□□□□ 0.14
SMARCB1-201ENST00000263121 H7C423 109 aa15.9■□□□□ 0.14
SMARCB1-201ENST00000263121 MRPL23Q16540 153 aaKnown RBP15.9■□□□□ 0.14
SMARCB1-201ENST00000263121 ICOSQ9Y6W8 199 aa15.9■□□□□ 0.14
SMARCB1-201ENST00000263121 DNAH9Q9NYC9 4486 aa15.89■□□□□ 0.14
SMARCB1-201ENST00000263121 A0A096LPF7 62 aa15.89■□□□□ 0.13
SMARCB1-201ENST00000263121 DPM2O94777 84 aa15.89■□□□□ 0.13
SMARCB1-201ENST00000263121 PAPPA-AS1Q5QFB9 102 aa15.89■□□□□ 0.13
SMARCB1-201ENST00000263121 hDV102S1A0JD36 115 aa15.89■□□□□ 0.13
SMARCB1-201ENST00000263121 IGKCP01834 107 aa15.89■□□□□ 0.13
SMARCB1-201ENST00000263121 FGF6P10767 208 aa15.89■□□□□ 0.13
SMARCB1-201ENST00000263121 MRPS36P82909 103 aaKnown RBP15.89■□□□□ 0.13
SMARCB1-201ENST00000263121 SPATA45Q537H7 98 aa15.89■□□□□ 0.13
SMARCB1-201ENST00000263121 AMELXQ99217 191 aa15.89■□□□□ 0.13
SMARCB1-201ENST00000263121 CSDC2Q9Y534 153 aaKnown RBP15.89■□□□□ 0.13
SMARCB1-201ENST00000263121 SH2D6Q7Z4S9 175 aa15.88■□□□□ 0.13
SMARCB1-201ENST00000263121 PLNP26678 52 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms