RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 GAGE13Q4V321 117 aa9.18□□□□□ -0.94
VAMP7-201ENST00000262640 DAZ4Q86SG3 579 aaKnown RBP9.18□□□□□ -0.94
VAMP7-201ENST00000262640 DAZ3Q9NR90 486 aaKnown RBP9.18□□□□□ -0.94
VAMP7-201ENST00000262640 CDPF1Q6NVV7 123 aa9.17□□□□□ -0.94
VAMP7-201ENST00000262640 PHLDA1Q8WV24 401 aaPredicted RBP9.17□□□□□ -0.94
VAMP7-201ENST00000262640 SCGB3A1Q96QR1 104 aa9.17□□□□□ -0.94
VAMP7-201ENST00000262640 PRO0255Q9UI72 69 aa9.17□□□□□ -0.94
VAMP7-201ENST00000262640 NBEAL1Q6ZS30 2694 aa9.17□□□□□ -0.94
VAMP7-201ENST00000262640 TM2D3Q9BRN9 247 aa9.17□□□□□ -0.94
VAMP7-201ENST00000262640 IGHV3-38A0A0C4DH36 116 aa9.16□□□□□ -0.94
VAMP7-201ENST00000262640 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.16□□□□□ -0.94
VAMP7-201ENST00000262640 CRYBA4P53673 196 aa9.16□□□□□ -0.94
VAMP7-201ENST00000262640 C20orf203Q8NBC4 194 aa9.16□□□□□ -0.94
VAMP7-201ENST00000262640 LOC100131303A0A0U1RQF7 123 aa9.16□□□□□ -0.94
VAMP7-201ENST00000262640 H0Y8G0 127 aa9.16□□□□□ -0.94
VAMP7-201ENST00000262640 LINC01545Q5VT33 79 aa9.16□□□□□ -0.94
VAMP7-201ENST00000262640 ERASQ7Z444 233 aa9.16□□□□□ -0.94
VAMP7-201ENST00000262640 S100A12P80511 92 aa9.15□□□□□ -0.94
VAMP7-201ENST00000262640 LINC00694P0DN24 101 aa9.15□□□□□ -0.94
VAMP7-201ENST00000262640 RPL39P62891 51 aaKnown RBP9.15□□□□□ -0.94
VAMP7-201ENST00000262640 TEX43Q6ZNM6 134 aa9.15□□□□□ -0.94
VAMP7-201ENST00000262640 PRSS1P07477 247 aa9.14□□□□□ -0.95
VAMP7-201ENST00000262640 LGALS9CQ6DKI2 356 aa9.14□□□□□ -0.95
VAMP7-201ENST00000262640 Q6ZN92 141 aa9.14□□□□□ -0.95
VAMP7-201ENST00000262640 MRAPQ8TCY5 172 aa9.14□□□□□ -0.95
VAMP7-201ENST00000262640 TMEM141Q96I45 108 aa9.14□□□□□ -0.95
VAMP7-201ENST00000262640 PAX4O43316 350 aa9.14□□□□□ -0.95
VAMP7-201ENST00000262640 C12orf74Q32Q52 190 aa9.14□□□□□ -0.95
VAMP7-201ENST00000262640 TIMM17AQ99595 171 aa9.14□□□□□ -0.95
VAMP7-201ENST00000262640 CHCHD7Q9BUK0 85 aa9.14□□□□□ -0.95
VAMP7-201ENST00000262640 ZMAT4Q9H898 229 aa9.14□□□□□ -0.95
VAMP7-201ENST00000262640 A0A0J9YWU9 116 aa9.13□□□□□ -0.95
VAMP7-201ENST00000262640 IGIPA6NJ69 53 aa9.13□□□□□ -0.95
VAMP7-201ENST00000262640 GYPEP15421 78 aa9.13□□□□□ -0.95
VAMP7-201ENST00000262640 GTSF1LQ9H1H1 148 aa9.13□□□□□ -0.95
VAMP7-201ENST00000262640 F5H768 121 aa9.12□□□□□ -0.95
VAMP7-201ENST00000262640 TRAV12-1A0A0B4J245 112 aa9.11□□□□□ -0.95
VAMP7-201ENST00000262640 HTN3P15516 51 aa9.11□□□□□ -0.95
VAMP7-201ENST00000262640 TMEM97Q5BJF2 176 aa9.11□□□□□ -0.95
VAMP7-201ENST00000262640 BAALCQ8WXS3 180 aa9.11□□□□□ -0.95
VAMP7-201ENST00000262640 VSIG2Q96IQ7 327 aa9.11□□□□□ -0.95
VAMP7-201ENST00000262640 VAMP8Q9BV40 100 aa9.11□□□□□ -0.95
VAMP7-201ENST00000262640 PYGO1Q9Y3Y4 419 aa9.11□□□□□ -0.95
VAMP7-201ENST00000262640 ODF1Q14990 250 aa9.11□□□□□ -0.95
VAMP7-201ENST00000262640 NTM-AS1Q6ZSK4 140 aa9.11□□□□□ -0.95
VAMP7-201ENST00000262640 ATOH7Q8N100 152 aa9.11□□□□□ -0.95
VAMP7-201ENST00000262640 TRAV26-1A0A087WT03 109 aa9.1□□□□□ -0.95
VAMP7-201ENST00000262640 NPSP0C0P6 89 aa9.1□□□□□ -0.95
VAMP7-201ENST00000262640 ATP6V0E2Q8NHE4 81 aa9.1□□□□□ -0.95
VAMP7-201ENST00000262640 PMCHL2Q9BQD1 86 aa9.1□□□□□ -0.95
VAMP7-201ENST00000262640 SPANXA1Q9NS26 97 aa9.1□□□□□ -0.95
VAMP7-201ENST00000262640 DNHD1Q96M86 4753 aa9.1□□□□□ -0.95
VAMP7-201ENST00000262640 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.1□□□□□ -0.95
VAMP7-201ENST00000262640 A0A087WX48 190 aa9.1□□□□□ -0.95
VAMP7-201ENST00000262640 A0A0J9YY99 117 aa9.1□□□□□ -0.95
VAMP7-201ENST00000262640 IGKV2-29A2NJV5 120 aaPredicted RBP9.1□□□□□ -0.95
VAMP7-201ENST00000262640 C11orf45Q8TAV5 145 aa9.09□□□□□ -0.95
VAMP7-201ENST00000262640 TRBV25-1A0A075B6N4 114 aa9.09□□□□□ -0.95
VAMP7-201ENST00000262640 TRAV9-2A0A087WT02 112 aa9.09□□□□□ -0.95
VAMP7-201ENST00000262640 SMAGPQ0VAQ4 97 aa9.09□□□□□ -0.95
VAMP7-201ENST00000262640 PAPPA-AS1Q5QFB9 102 aa9.09□□□□□ -0.95
VAMP7-201ENST00000262640 TMEM243Q9BU79 118 aa9.09□□□□□ -0.95
VAMP7-201ENST00000262640 TIMM21Q9BVV7 248 aa9.09□□□□□ -0.95
VAMP7-201ENST00000262640 UBE2D4Q9Y2X8 147 aa9.09□□□□□ -0.95
VAMP7-201ENST00000262640 PMVKQ15126 192 aa9.08□□□□□ -0.96
VAMP7-201ENST00000262640 Q6ZTC4 211 aa9.08□□□□□ -0.96
VAMP7-201ENST00000262640 B9D2Q9BPU9 175 aa9.08□□□□□ -0.96
VAMP7-201ENST00000262640 IGLV4-3A0A075B6K6 122 aa9.08□□□□□ -0.96
VAMP7-201ENST00000262640 TRBV6-8A0A0A6YYG3 113 aa9.08□□□□□ -0.96
VAMP7-201ENST00000262640 ZNF664Q8N3J9 261 aa9.08□□□□□ -0.96
VAMP7-201ENST00000262640 PAM16Q9Y3D7 125 aa9.08□□□□□ -0.96
VAMP7-201ENST00000262640 CHTOPQ9Y3Y2 248 aaKnown RBP9.08□□□□□ -0.96
VAMP7-201ENST00000262640 PRSS29PA6NIE9 313 aa9.07□□□□□ -0.96
VAMP7-201ENST00000262640 H7C423 109 aa9.07□□□□□ -0.96
VAMP7-201ENST00000262640 DPM2O94777 84 aa9.07□□□□□ -0.96
VAMP7-201ENST00000262640 MRPL23Q16540 153 aaKnown RBP9.07□□□□□ -0.96
VAMP7-201ENST00000262640 SH2D6Q7Z4S9 175 aa9.07□□□□□ -0.96
VAMP7-201ENST00000262640 MRPL35Q9NZE8 188 aaKnown RBP9.07□□□□□ -0.96
VAMP7-201ENST00000262640 ICOSQ9Y6W8 199 aa9.07□□□□□ -0.96
VAMP7-201ENST00000262640 HSBP1L1C9JCN9 74 aa9.07□□□□□ -0.96
VAMP7-201ENST00000262640 F8VRH5 84 aa9.07□□□□□ -0.96
VAMP7-201ENST00000262640 NANOS2P60321 138 aaKnown RBP9.07□□□□□ -0.96
VAMP7-201ENST00000262640 CST9LQ9H4G1 147 aa9.07□□□□□ -0.96
VAMP7-201ENST00000262640 H3BNG1 76 aa9.06□□□□□ -0.96
VAMP7-201ENST00000262640 UBE2L6O14933 153 aa9.06□□□□□ -0.96
VAMP7-201ENST00000262640 IGKCP01834 107 aa9.06□□□□□ -0.96
VAMP7-201ENST00000262640 PLNP26678 52 aa9.06□□□□□ -0.96
VAMP7-201ENST00000262640 PKIAP61925 76 aa9.06□□□□□ -0.96
VAMP7-201ENST00000262640 SPATA45Q537H7 98 aa9.06□□□□□ -0.96
VAMP7-201ENST00000262640 MRPL52Q86TS9 123 aaKnown RBP9.06□□□□□ -0.96
VAMP7-201ENST00000262640 OPRPNQ99935 248 aaPredicted RBP9.06□□□□□ -0.96
VAMP7-201ENST00000262640 MAJINQ3KP22 176 aa9.06□□□□□ -0.96
VAMP7-201ENST00000262640 CEMP1Q6PRD7 247 aaPredicted RBP9.06□□□□□ -0.96
VAMP7-201ENST00000262640 VCX2Q9H322 139 aa9.06□□□□□ -0.96
VAMP7-201ENST00000262640 HUWE1Q7Z6Z7 4374 aaKnown RBP9.05□□□□□ -0.96
VAMP7-201ENST00000262640 TSTD3H0UI37 97 aa9.05□□□□□ -0.96
VAMP7-201ENST00000262640 FGF6P10767 208 aa9.05□□□□□ -0.96
VAMP7-201ENST00000262640 MRPS36P82909 103 aaKnown RBP9.05□□□□□ -0.96
VAMP7-201ENST00000262640 DGAT2L7PQ6IED9 249 aa9.05□□□□□ -0.96
VAMP7-201ENST00000262640 CSDC2Q9Y534 153 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms