RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 TRBV25-1A0A075B6N4 114 aa11.33□□□□□ -0.6
CHCHD3-201ENST00000262570 PRSS47A8MTI9 375 aa11.33□□□□□ -0.6
CHCHD3-201ENST00000262570 DNAH10OSP0CZ25 163 aa11.33□□□□□ -0.6
CHCHD3-201ENST00000262570 IGHV1-24A0A0C4DH33 117 aa11.32□□□□□ -0.6
CHCHD3-201ENST00000262570 COLCA2A8K830 154 aa11.31□□□□□ -0.6
CHCHD3-201ENST00000262570 TSHBP01222 138 aa11.31□□□□□ -0.6
CHCHD3-201ENST00000262570 SMIM2Q9BVW6 85 aa11.31□□□□□ -0.6
CHCHD3-201ENST00000262570 LINC01556Q5JQF7 62 aa11.3□□□□□ -0.6
CHCHD3-201ENST00000262570 NIT1Q86X76 327 aa11.3□□□□□ -0.6
CHCHD3-201ENST00000262570 KIR2DL4Q99706 377 aa11.3□□□□□ -0.6
CHCHD3-201ENST00000262570 ALKBH7Q9BT30 221 aaPredicted RBP11.3□□□□□ -0.6
CHCHD3-201ENST00000262570 NBDYA0A0U1RRE5 68 aa11.29□□□□□ -0.6
CHCHD3-201ENST00000262570 AMTP48728 403 aa11.29□□□□□ -0.6
CHCHD3-201ENST00000262570 CHCHD5Q9BSY4 110 aa11.29□□□□□ -0.6
CHCHD3-201ENST00000262570 TMEM243Q9BU79 118 aa11.29□□□□□ -0.6
CHCHD3-201ENST00000262570 MAP1LC3AQ9H492 121 aa11.29□□□□□ -0.6
CHCHD3-201ENST00000262570 Q6ZR54 194 aa11.28□□□□□ -0.6
CHCHD3-201ENST00000262570 Q8N3U1 123 aa11.28□□□□□ -0.6
CHCHD3-201ENST00000262570 LOC389332A0A1B0GUA5 103 aa11.28□□□□□ -0.6
CHCHD3-201ENST00000262570 K7EP13 123 aa11.28□□□□□ -0.6
CHCHD3-201ENST00000262570 M0R2N4 97 aa11.28□□□□□ -0.6
CHCHD3-201ENST00000262570 CHCHD7Q9BUK0 85 aa11.28□□□□□ -0.6
CHCHD3-201ENST00000262570 KRTAP1-5Q9BYS1 174 aa11.28□□□□□ -0.6
CHCHD3-201ENST00000262570 TMEM262E9PQX1 116 aa11.27□□□□□ -0.61
CHCHD3-201ENST00000262570 ESDP10768 282 aa11.27□□□□□ -0.61
CHCHD3-201ENST00000262570 FCER1GP30273 86 aa11.27□□□□□ -0.61
CHCHD3-201ENST00000262570 TTC32Q5I0X7 151 aa11.27□□□□□ -0.61
CHCHD3-201ENST00000262570 TRAV9-2A0A087WT02 112 aa11.26□□□□□ -0.61
CHCHD3-201ENST00000262570 A0A087WX48 190 aa11.26□□□□□ -0.61
CHCHD3-201ENST00000262570 TCAPO15273 167 aa11.26□□□□□ -0.61
CHCHD3-201ENST00000262570 IGHV3-30P01768 117 aa11.26□□□□□ -0.61
CHCHD3-201ENST00000262570 IGHV3-33P01772 117 aa11.26□□□□□ -0.61
CHCHD3-201ENST00000262570 IGHV3-30-3P0DP02 117 aa11.26□□□□□ -0.61
CHCHD3-201ENST00000262570 IGHV3-30-5P0DP03 117 aa11.26□□□□□ -0.61
CHCHD3-201ENST00000262570 RAB5AP20339 215 aa11.26□□□□□ -0.61
CHCHD3-201ENST00000262570 PKIAP61925 76 aa11.26□□□□□ -0.61
CHCHD3-201ENST00000262570 GAGE6Q13070 117 aa11.26□□□□□ -0.61
CHCHD3-201ENST00000262570 DNAH2Q9P225 4427 aa11.26□□□□□ -0.61
CHCHD3-201ENST00000262570 MPV17L2Q567V2 206 aa11.25□□□□□ -0.61
CHCHD3-201ENST00000262570 Q8N8P6 123 aa11.25□□□□□ -0.61
CHCHD3-201ENST00000262570 H7C423 109 aa11.24□□□□□ -0.61
CHCHD3-201ENST00000262570 C10orf126Q8N4M7 172 aa11.24□□□□□ -0.61
CHCHD3-201ENST00000262570 NXT2Q9NPJ8 142 aaKnown RBP11.24□□□□□ -0.61
CHCHD3-201ENST00000262570 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.24□□□□□ -0.61
CHCHD3-201ENST00000262570 IGKV2-29A2NJV5 120 aaPredicted RBP11.24□□□□□ -0.61
CHCHD3-201ENST00000262570 UBE2L6O14933 153 aa11.24□□□□□ -0.61
CHCHD3-201ENST00000262570 TRGC2P03986 189 aa11.24□□□□□ -0.61
CHCHD3-201ENST00000262570 IFI27P40305 119 aaPredicted RBP11.24□□□□□ -0.61
CHCHD3-201ENST00000262570 A0A1B0GUV1 79 aa11.23□□□□□ -0.61
CHCHD3-201ENST00000262570 RBX1P62877 108 aa11.23□□□□□ -0.61
CHCHD3-201ENST00000262570 Q8N976 141 aa11.23□□□□□ -0.61
CHCHD3-201ENST00000262570 IBA57-AS1B1ANH7 110 aa11.22□□□□□ -0.61
CHCHD3-201ENST00000262570 K7EMI3 77 aa11.22□□□□□ -0.61
CHCHD3-201ENST00000262570 C20orf203Q8NBC4 194 aa11.22□□□□□ -0.61
CHCHD3-201ENST00000262570 C18orf32Q8TCD1 76 aa11.22□□□□□ -0.61
CHCHD3-201ENST00000262570 PRSS3P2Q8NHM4 247 aa11.21□□□□□ -0.61
CHCHD3-201ENST00000262570 FGF6P10767 208 aa11.2□□□□□ -0.62
CHCHD3-201ENST00000262570 BTF3P20290 206 aaKnown RBP11.2□□□□□ -0.62
CHCHD3-201ENST00000262570 KLK12Q9UKR0 248 aa11.2□□□□□ -0.62
CHCHD3-201ENST00000262570 IGLV4-60A0A075B6I1 120 aa11.2□□□□□ -0.62
CHCHD3-201ENST00000262570 LAGE3Q14657 143 aa11.2□□□□□ -0.62
CHCHD3-201ENST00000262570 MRPL52Q86TS9 123 aaKnown RBP11.2□□□□□ -0.62
CHCHD3-201ENST00000262570 LINC01546A6NGU7 62 aa11.19□□□□□ -0.62
CHCHD3-201ENST00000262570 ANGP03950 147 aaKnown RBP11.19□□□□□ -0.62
CHCHD3-201ENST00000262570 ZNF25P17030 456 aaPredicted RBP11.19□□□□□ -0.62
CHCHD3-201ENST00000262570 ORMDL2Q53FV1 153 aa11.19□□□□□ -0.62
CHCHD3-201ENST00000262570 AMMECR1LQ6DCA0 310 aa11.19□□□□□ -0.62
CHCHD3-201ENST00000262570 RNASEKQ6P5S7 137 aaKnown RBP11.19□□□□□ -0.62
CHCHD3-201ENST00000262570 TMEM18Q96B42 140 aa11.19□□□□□ -0.62
CHCHD3-201ENST00000262570 DNAH10Q8IVF4 4471 aa11.19□□□□□ -0.62
CHCHD3-201ENST00000262570 RPL39P62891 51 aaKnown RBP11.18□□□□□ -0.62
CHCHD3-201ENST00000262570 C1orf134Q5TEV5 83 aa11.18□□□□□ -0.62
CHCHD3-201ENST00000262570 C6orf223Q8N319 242 aa11.18□□□□□ -0.62
CHCHD3-201ENST00000262570 PRR34Q9NV39 138 aa11.17□□□□□ -0.62
CHCHD3-201ENST00000262570 UBE2D4Q9Y2X8 147 aa11.17□□□□□ -0.62
CHCHD3-201ENST00000262570 CSDC2Q9Y534 153 aaKnown RBP11.17□□□□□ -0.62
CHCHD3-201ENST00000262570 ENHOQ6UWT2 76 aa11.16□□□□□ -0.62
CHCHD3-201ENST00000262570 FA2HQ7L5A8 372 aa11.16□□□□□ -0.62
CHCHD3-201ENST00000262570 LINC00269Q8N2A0 174 aa11.16□□□□□ -0.62
CHCHD3-201ENST00000262570 UBE2WQ96B02 151 aa11.16□□□□□ -0.62
CHCHD3-201ENST00000262570 URB1-AS1Q96HZ7 61 aa11.16□□□□□ -0.62
CHCHD3-201ENST00000262570 FRAS1Q86XX4 4008 aa11.16□□□□□ -0.62
CHCHD3-201ENST00000262570 TRAV8-3A0A0A6YYJ7 113 aa11.16□□□□□ -0.62
CHCHD3-201ENST00000262570 LINC00614P0C842 121 aa11.16□□□□□ -0.62
CHCHD3-201ENST00000262570 SMAGPQ0VAQ4 97 aa11.16□□□□□ -0.62
CHCHD3-201ENST00000262570 TMEM101Q96IK0 257 aa11.16□□□□□ -0.62
CHCHD3-201ENST00000262570 TIMM21Q9BVV7 248 aa11.16□□□□□ -0.62
CHCHD3-201ENST00000262570 C2orf66Q6UXQ4 117 aa11.15□□□□□ -0.62
CHCHD3-201ENST00000262570 OR5A1Q8NGJ0 315 aa11.15□□□□□ -0.62
CHCHD3-201ENST00000262570 AP5S1Q9NUS5 200 aa11.15□□□□□ -0.62
CHCHD3-201ENST00000262570 DNAH17Q9UFH2 4485 aa11.14□□□□□ -0.63
CHCHD3-201ENST00000262570 RTL8CO15255 209 aa11.14□□□□□ -0.63
CHCHD3-201ENST00000262570 RAB5BP61020 215 aa11.14□□□□□ -0.63
CHCHD3-201ENST00000262570 REG3AQ06141 175 aa11.14□□□□□ -0.63
CHCHD3-201ENST00000262570 Q0VG73 95 aa11.14□□□□□ -0.63
CHCHD3-201ENST00000262570 DGAT2L7PQ6IED9 249 aa11.14□□□□□ -0.63
CHCHD3-201ENST00000262570 Q6ZRN7 208 aaPredicted RBP11.14□□□□□ -0.63
CHCHD3-201ENST00000262570 NFE4Q86UQ8 179 aa11.14□□□□□ -0.63
CHCHD3-201ENST00000262570 Q9HAA7 133 aa11.14□□□□□ -0.63
CHCHD3-201ENST00000262570 CDC42SE2Q9NRR3 84 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms