RNA–Protein interactions for RNA: ENST00000262426.5

FOXF1-201, Transcript of forkhead box F1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXF1, Length 3,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1-201ENST00000262426 A0A087WX48 190 aa10.74□□□□□ -0.69
FOXF1-201ENST00000262426 OVOL1O14753 267 aa10.74□□□□□ -0.69
FOXF1-201ENST00000262426 RNF152Q8N8N0 203 aa10.74□□□□□ -0.69
FOXF1-201ENST00000262426 MRPL53Q96EL3 112 aaKnown RBP10.74□□□□□ -0.69
FOXF1-201ENST00000262426 RNF185Q96GF1 192 aa10.74□□□□□ -0.69
FOXF1-201ENST00000262426 NSUN5P1Q3KNT7 163 aa10.74□□□□□ -0.69
FOXF1-201ENST00000262426 LINC00477Q96M19 166 aa10.74□□□□□ -0.69
FOXF1-201ENST00000262426 ZNF56Q15929 161 aa10.73□□□□□ -0.69
FOXF1-201ENST00000262426 APRG1Q8IVJ8 170 aa10.73□□□□□ -0.69
FOXF1-201ENST00000262426 DEFB131AP59861 70 aa10.73□□□□□ -0.69
FOXF1-201ENST00000262426 LINC01559Q495D7 138 aa10.73□□□□□ -0.69
FOXF1-201ENST00000262426 S100A4P26447 101 aaKnown RBP10.72□□□□□ -0.69
FOXF1-201ENST00000262426 ZNF493Q6ZR52 646 aa10.72□□□□□ -0.69
FOXF1-201ENST00000262426 K7EQG2 157 aa10.72□□□□□ -0.69
FOXF1-201ENST00000262426 ATP5LO75964 103 aa10.72□□□□□ -0.69
FOXF1-201ENST00000262426 C4orf3Q8WVX3 66 aa10.72□□□□□ -0.69
FOXF1-201ENST00000262426 SCGB3A1Q96QR1 104 aa10.72□□□□□ -0.69
FOXF1-201ENST00000262426 ZMAT4Q9H898 229 aa10.72□□□□□ -0.69
FOXF1-201ENST00000262426 NPC2P61916 151 aa10.72□□□□□ -0.69
FOXF1-201ENST00000262426 SNRPD3P62318 126 aaKnown RBP10.72□□□□□ -0.69
FOXF1-201ENST00000262426 SPANXN1Q5VSR9 72 aa10.72□□□□□ -0.69
FOXF1-201ENST00000262426 TMEM86BQ8N661 226 aa10.71□□□□□ -0.69
FOXF1-201ENST00000262426 U3KQK5 164 aa10.71□□□□□ -0.69
FOXF1-201ENST00000262426 DYNLRB2Q8TF09 96 aa10.71□□□□□ -0.69
FOXF1-201ENST00000262426 LINC00694P0DN24 101 aa10.71□□□□□ -0.7
FOXF1-201ENST00000262426 MUC4Q99102 2169 aa10.71□□□□□ -0.7
FOXF1-201ENST00000262426 LGALS9O00182 355 aa10.7□□□□□ -0.7
FOXF1-201ENST00000262426 NBEAL2Q6ZNJ1 2754 aa10.7□□□□□ -0.7
FOXF1-201ENST00000262426 CCL24O00175 119 aa10.7□□□□□ -0.7
FOXF1-201ENST00000262426 RS1O15537 224 aa10.7□□□□□ -0.7
FOXF1-201ENST00000262426 LAGE3Q14657 143 aa10.7□□□□□ -0.7
FOXF1-201ENST00000262426 ATP6V0E2Q8NHE4 81 aa10.7□□□□□ -0.7
FOXF1-201ENST00000262426 TRAV8-4A0A0B4J246 113 aa10.7□□□□□ -0.7
FOXF1-201ENST00000262426 Q8N1Y9 231 aa10.7□□□□□ -0.7
FOXF1-201ENST00000262426 NXT2Q9NPJ8 142 aaKnown RBP10.7□□□□□ -0.7
FOXF1-201ENST00000262426 JPT2Q9H910 190 aa10.69□□□□□ -0.7
FOXF1-201ENST00000262426 TRAV21A0A0B4J279 112 aa10.69□□□□□ -0.7
FOXF1-201ENST00000262426 RNASE1P07998 156 aaKnown RBP10.69□□□□□ -0.7
FOXF1-201ENST00000262426 NDUFA11Q86Y39 141 aa10.69□□□□□ -0.7
FOXF1-201ENST00000262426 A0A0J9YX75 114 aa10.68□□□□□ -0.7
FOXF1-201ENST00000262426 HILS1P60008 231 aa10.68□□□□□ -0.7
FOXF1-201ENST00000262426 TMEM170BQ5T4T1 132 aa10.68□□□□□ -0.7
FOXF1-201ENST00000262426 TRAV2A0A0B4J234 112 aa10.68□□□□□ -0.7
FOXF1-201ENST00000262426 NACAE9PAV3 2078 aa10.68□□□□□ -0.7
FOXF1-201ENST00000262426 MGPP08493 103 aa10.67□□□□□ -0.7
FOXF1-201ENST00000262426 CD7P09564 240 aa10.67□□□□□ -0.7
FOXF1-201ENST00000262426 C14orf178Q8N769 122 aaPredicted RBP10.67□□□□□ -0.7
FOXF1-201ENST00000262426 ADARB2-AS1A8MUL3 147 aa10.67□□□□□ -0.7
FOXF1-201ENST00000262426 CFC1BP0CG36 223 aa10.67□□□□□ -0.7
FOXF1-201ENST00000262426 CFC1P0CG37 223 aa10.67□□□□□ -0.7
FOXF1-201ENST00000262426 TAL2Q16559 108 aa10.67□□□□□ -0.7
FOXF1-201ENST00000262426 F8VRH5 84 aa10.67□□□□□ -0.7
FOXF1-201ENST00000262426 H7C1H1 209 aa10.67□□□□□ -0.7
FOXF1-201ENST00000262426 RPL39LQ96EH5 51 aaKnown RBP10.67□□□□□ -0.7
FOXF1-201ENST00000262426 FAM19A4Q96LR4 140 aa10.67□□□□□ -0.7
FOXF1-201ENST00000262426 PEMTQ9UBM1 199 aa10.66□□□□□ -0.7
FOXF1-201ENST00000262426 PHLDA3Q9Y5J5 127 aa10.66□□□□□ -0.7
FOXF1-201ENST00000262426 PLNP26678 52 aa10.66□□□□□ -0.7
FOXF1-201ENST00000262426 HERVK_113P61574 105 aa10.66□□□□□ -0.7
FOXF1-201ENST00000262426 DEFB114Q30KQ6 69 aa10.66□□□□□ -0.7
FOXF1-201ENST00000262426 MDFICQ9P1T7 246 aa10.66□□□□□ -0.7
FOXF1-201ENST00000262426 KRTAP10-3P60369 221 aa10.66□□□□□ -0.7
FOXF1-201ENST00000262426 EDA2RQ9HAV5 297 aa10.66□□□□□ -0.7
FOXF1-201ENST00000262426 RNASE3P12724 160 aaKnown RBP10.65□□□□□ -0.7
FOXF1-201ENST00000262426 Q8N8P6 123 aa10.65□□□□□ -0.7
FOXF1-201ENST00000262426 ASIPP42127 132 aa10.64□□□□□ -0.71
FOXF1-201ENST00000262426 UBE2D3P61077 147 aa10.64□□□□□ -0.71
FOXF1-201ENST00000262426 UBE2D2P62837 147 aa10.64□□□□□ -0.71
FOXF1-201ENST00000262426 CEMP1Q6PRD7 247 aaPredicted RBP10.64□□□□□ -0.71
FOXF1-201ENST00000262426 WFDC10AQ9H1F0 79 aa10.64□□□□□ -0.71
FOXF1-201ENST00000262426 LENEPQ9Y5L5 61 aa10.64□□□□□ -0.71
FOXF1-201ENST00000262426 FAM236AA0A1B0GUQ0 79 aa10.64□□□□□ -0.71
FOXF1-201ENST00000262426 FAM236BA0A1B0GV22 79 aa10.64□□□□□ -0.71
FOXF1-201ENST00000262426 KLLNB2CW77 178 aa10.64□□□□□ -0.71
FOXF1-201ENST00000262426 RBMY1A1P0DJD3 496 aaKnown RBP10.64□□□□□ -0.71
FOXF1-201ENST00000262426 RBMY1CP0DJD4 496 aa10.64□□□□□ -0.71
FOXF1-201ENST00000262426 RBMY1FQ15415 496 aaKnown RBP10.64□□□□□ -0.71
FOXF1-201ENST00000262426 ODF3Q96PU9 254 aa10.64□□□□□ -0.71
FOXF1-201ENST00000262426 RASL10AQ92737 203 aa10.64□□□□□ -0.71
FOXF1-201ENST00000262426 A0A087WWL8 130 aa10.63□□□□□ -0.71
FOXF1-201ENST00000262426 RBMY1BA6NDE4 496 aaKnown RBP10.63□□□□□ -0.71
FOXF1-201ENST00000262426 RBMY1EA6NEQ0 496 aaKnown RBP10.63□□□□□ -0.71
FOXF1-201ENST00000262426 RBMY1DP0C7P1 496 aaKnown RBP10.63□□□□□ -0.71
FOXF1-201ENST00000262426 CSDC2Q9Y534 153 aaKnown RBP10.63□□□□□ -0.71
FOXF1-201ENST00000262426 A4D1N5 150 aa10.63□□□□□ -0.71
FOXF1-201ENST00000262426 C10orf126Q8N4M7 172 aa10.63□□□□□ -0.71
FOXF1-201ENST00000262426 PRSS2P07478 247 aa10.62□□□□□ -0.71
FOXF1-201ENST00000262426 ZNF22P17026 224 aaPredicted RBP10.62□□□□□ -0.71
FOXF1-201ENST00000262426 UBE2D1P51668 147 aa10.62□□□□□ -0.71
FOXF1-201ENST00000262426 C9orf153Q5TBE3 101 aa10.62□□□□□ -0.71
FOXF1-201ENST00000262426 FAM74A4Q5TZK3 123 aa10.62□□□□□ -0.71
FOXF1-201ENST00000262426 SPATA3Q8NHX4 192 aa10.62□□□□□ -0.71
FOXF1-201ENST00000262426 CNFNQ9BYD5 112 aa10.62□□□□□ -0.71
FOXF1-201ENST00000262426 IGHV3OR16-12A0A075B7B8 117 aa10.62□□□□□ -0.71
FOXF1-201ENST00000262426 TSPEAR-AS2P59090 65 aa10.62□□□□□ -0.71
FOXF1-201ENST00000262426 LYRM7Q5U5X0 104 aa10.62□□□□□ -0.71
FOXF1-201ENST00000262426 MAP6D1Q9H9H5 199 aa10.62□□□□□ -0.71
FOXF1-201ENST00000262426 PRO1854Q9UHT4 67 aa10.62□□□□□ -0.71
FOXF1-201ENST00000262426 VCX2Q9H322 139 aa10.62□□□□□ -0.71
FOXF1-201ENST00000262426 PROK1P58294 105 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms