RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 ODF1Q14990 250 aa10.75□□□□□ -0.69
HDHD3-201ENST00000238379 IGHV3-38A0A0C4DH36 116 aa10.74□□□□□ -0.69
HDHD3-201ENST00000238379 PHLDA1Q8WV24 401 aaPredicted RBP10.74□□□□□ -0.69
HDHD3-201ENST00000238379 GAGE12JA6NER3 117 aa10.74□□□□□ -0.69
HDHD3-201ENST00000238379 TSTD3H0UI37 97 aa10.74□□□□□ -0.69
HDHD3-201ENST00000238379 UBE2D3P61077 147 aa10.74□□□□□ -0.69
HDHD3-201ENST00000238379 UBE2D2P62837 147 aa10.74□□□□□ -0.69
HDHD3-201ENST00000238379 GAGE1Q13065 139 aa10.74□□□□□ -0.69
HDHD3-201ENST00000238379 GAGE4Q13068 117 aa10.74□□□□□ -0.69
HDHD3-201ENST00000238379 GAGE5Q13069 117 aa10.74□□□□□ -0.69
HDHD3-201ENST00000238379 GAGE13Q4V321 117 aa10.74□□□□□ -0.69
HDHD3-201ENST00000238379 KPRPQ5T749 579 aaPredicted RBP10.74□□□□□ -0.69
HDHD3-201ENST00000238379 Q6ZN92 141 aa10.74□□□□□ -0.69
HDHD3-201ENST00000238379 RETNQ9HD89 108 aa10.74□□□□□ -0.69
HDHD3-201ENST00000238379 CELA1Q9UNI1 258 aa10.74□□□□□ -0.69
HDHD3-201ENST00000238379 LOC100131303A0A0U1RQF7 123 aa10.73□□□□□ -0.69
HDHD3-201ENST00000238379 COTL1Q14019 142 aa10.73□□□□□ -0.69
HDHD3-201ENST00000238379 CHCHD7Q9BUK0 85 aa10.73□□□□□ -0.69
HDHD3-201ENST00000238379 HHLA3Q9XRX5 114 aa10.73□□□□□ -0.69
HDHD3-201ENST00000238379 PRB2P02812 416 aaPredicted RBP10.72□□□□□ -0.69
HDHD3-201ENST00000238379 SPATA45Q537H7 98 aa10.72□□□□□ -0.69
HDHD3-201ENST00000238379 DAZ4Q86SG3 579 aaKnown RBP10.72□□□□□ -0.69
HDHD3-201ENST00000238379 BAALCQ8WXS3 180 aa10.72□□□□□ -0.69
HDHD3-201ENST00000238379 TIMM17AQ99595 171 aa10.72□□□□□ -0.69
HDHD3-201ENST00000238379 DAZ3Q9NR90 486 aaKnown RBP10.72□□□□□ -0.69
HDHD3-201ENST00000238379 A0A087WX48 190 aa10.72□□□□□ -0.69
HDHD3-201ENST00000238379 TRAV12-1A0A0B4J245 112 aa10.72□□□□□ -0.69
HDHD3-201ENST00000238379 hDV102S1A0JD36 115 aa10.72□□□□□ -0.69
HDHD3-201ENST00000238379 SPART-AS1P0CW21 52 aa10.72□□□□□ -0.69
HDHD3-201ENST00000238379 TMEM141Q96I45 108 aa10.72□□□□□ -0.69
HDHD3-201ENST00000238379 PRADC1Q9BSG0 188 aa10.72□□□□□ -0.69
HDHD3-201ENST00000238379 DAD1P61803 113 aa10.71□□□□□ -0.69
HDHD3-201ENST00000238379 DNAH3Q8TD57 4116 aa10.71□□□□□ -0.7
HDHD3-201ENST00000238379 K7EIL1 84 aa10.7□□□□□ -0.7
HDHD3-201ENST00000238379 CRYBA4P53673 196 aa10.7□□□□□ -0.7
HDHD3-201ENST00000238379 LURAP1LQ8IV03 231 aa10.7□□□□□ -0.7
HDHD3-201ENST00000238379 MRPL35Q9NZE8 188 aaKnown RBP10.7□□□□□ -0.7
HDHD3-201ENST00000238379 LINC00694P0DN24 101 aa10.7□□□□□ -0.7
HDHD3-201ENST00000238379 NTM-AS1Q6ZSK4 140 aa10.7□□□□□ -0.7
HDHD3-201ENST00000238379 PRO0255Q9UI72 69 aa10.7□□□□□ -0.7
HDHD3-201ENST00000238379 PRSS29PA6NIE9 313 aa10.69□□□□□ -0.7
HDHD3-201ENST00000238379 SBSPONQ8IVN8 264 aa10.69□□□□□ -0.7
HDHD3-201ENST00000238379 PYGO1Q9Y3Y4 419 aa10.69□□□□□ -0.7
HDHD3-201ENST00000238379 DPM2O94777 84 aa10.68□□□□□ -0.7
HDHD3-201ENST00000238379 OPRPNQ99935 248 aaPredicted RBP10.68□□□□□ -0.7
HDHD3-201ENST00000238379 HSBP1L1C9JCN9 74 aa10.68□□□□□ -0.7
HDHD3-201ENST00000238379 F8VRH5 84 aa10.68□□□□□ -0.7
HDHD3-201ENST00000238379 ATP5G1P05496 136 aa10.68□□□□□ -0.7
HDHD3-201ENST00000238379 DDTP30046 118 aa10.68□□□□□ -0.7
HDHD3-201ENST00000238379 FAM104AQ969W3 186 aa10.68□□□□□ -0.7
HDHD3-201ENST00000238379 TENM3Q9P273 2699 aa10.67□□□□□ -0.7
HDHD3-201ENST00000238379 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.67□□□□□ -0.7
HDHD3-201ENST00000238379 TEX48A0A1B0GUV7 120 aa10.67□□□□□ -0.7
HDHD3-201ENST00000238379 IGKV2-29A2NJV5 120 aaPredicted RBP10.67□□□□□ -0.7
HDHD3-201ENST00000238379 IGKCP01834 107 aa10.67□□□□□ -0.7
HDHD3-201ENST00000238379 IGLC3P0DOY3 106 aa10.67□□□□□ -0.7
HDHD3-201ENST00000238379 PMVKQ15126 192 aa10.67□□□□□ -0.7
HDHD3-201ENST00000238379 ZC2HC1BQ5TFG8 222 aa10.67□□□□□ -0.7
HDHD3-201ENST00000238379 GTSF1LQ9H1H1 148 aa10.67□□□□□ -0.7
HDHD3-201ENST00000238379 CST9LQ9H4G1 147 aa10.67□□□□□ -0.7
HDHD3-201ENST00000238379 CHTOPQ9Y3Y2 248 aaKnown RBP10.67□□□□□ -0.7
HDHD3-201ENST00000238379 IGLV4-3A0A075B6K6 122 aa10.66□□□□□ -0.7
HDHD3-201ENST00000238379 LINC00587B1AMM8 73 aa10.66□□□□□ -0.7
HDHD3-201ENST00000238379 GYPEP15421 78 aa10.66□□□□□ -0.7
HDHD3-201ENST00000238379 CEMP1Q6PRD7 247 aaPredicted RBP10.66□□□□□ -0.7
HDHD3-201ENST00000238379 STPG4Q8N801 248 aa10.66□□□□□ -0.7
HDHD3-201ENST00000238379 C11orf68Q9H3H3 251 aaKnown RBP10.66□□□□□ -0.7
HDHD3-201ENST00000238379 UBE2D4Q9Y2X8 147 aa10.66□□□□□ -0.7
HDHD3-201ENST00000238379 VSIG2Q96IQ7 327 aa10.65□□□□□ -0.7
HDHD3-201ENST00000238379 MIEN1Q9BRT3 115 aa10.65□□□□□ -0.7
HDHD3-201ENST00000238379 SPANXA1Q9NS26 97 aa10.65□□□□□ -0.7
HDHD3-201ENST00000238379 PAX4O43316 350 aa10.65□□□□□ -0.71
HDHD3-201ENST00000238379 NPSP0C0P6 89 aa10.65□□□□□ -0.71
HDHD3-201ENST00000238379 PLNP26678 52 aa10.65□□□□□ -0.71
HDHD3-201ENST00000238379 C14orf144Q96I85 54 aa10.65□□□□□ -0.71
HDHD3-201ENST00000238379 C12orf74Q32Q52 190 aa10.64□□□□□ -0.71
HDHD3-201ENST00000238379 ANKRD39Q53RE8 183 aa10.64□□□□□ -0.71
HDHD3-201ENST00000238379 DEFB121Q5J5C9 76 aa10.64□□□□□ -0.71
HDHD3-201ENST00000238379 IGLV4-69A0A075B6H9 119 aa10.63□□□□□ -0.71
HDHD3-201ENST00000238379 PAPPA-AS1Q5QFB9 102 aa10.63□□□□□ -0.71
HDHD3-201ENST00000238379 TIMM21Q9BVV7 248 aa10.63□□□□□ -0.71
HDHD3-201ENST00000238379 F5H768 121 aa10.63□□□□□ -0.71
HDHD3-201ENST00000238379 ATP6V0E2Q8NHE4 81 aa10.63□□□□□ -0.71
HDHD3-201ENST00000238379 AMELXQ99217 191 aa10.63□□□□□ -0.71
HDHD3-201ENST00000238379 TM2D3Q9BRN9 247 aa10.63□□□□□ -0.71
HDHD3-201ENST00000238379 VCX2Q9H322 139 aa10.63□□□□□ -0.71
HDHD3-201ENST00000238379 TRBV6-8A0A0A6YYG3 113 aa10.62□□□□□ -0.71
HDHD3-201ENST00000238379 A0A0J9YY99 117 aa10.62□□□□□ -0.71
HDHD3-201ENST00000238379 MRPL52Q86TS9 123 aaKnown RBP10.62□□□□□ -0.71
HDHD3-201ENST00000238379 UQCR10Q9UDW1 63 aa10.62□□□□□ -0.71
HDHD3-201ENST00000238379 TRBV25-1A0A075B6N4 114 aa10.61□□□□□ -0.71
HDHD3-201ENST00000238379 TRAV26-1A0A087WT03 109 aa10.61□□□□□ -0.71
HDHD3-201ENST00000238379 A0A0J9YWU9 116 aa10.61□□□□□ -0.71
HDHD3-201ENST00000238379 SPATA25Q9BR10 227 aa10.61□□□□□ -0.71
HDHD3-201ENST00000238379 TMEM243Q9BU79 118 aa10.61□□□□□ -0.71
HDHD3-201ENST00000238379 FGF6P10767 208 aa10.61□□□□□ -0.71
HDHD3-201ENST00000238379 HTN3P15516 51 aa10.61□□□□□ -0.71
HDHD3-201ENST00000238379 MRPS36P82909 103 aaKnown RBP10.61□□□□□ -0.71
HDHD3-201ENST00000238379 TMEM97Q5BJF2 176 aa10.61□□□□□ -0.71
HDHD3-201ENST00000238379 Q6ZUT4 128 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms