RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 LGALS3P17931 250 aaKnown RBP18.26■□□□□ 0.51
RUNDC3A-201ENST00000225441 LINC00467Q9BRT7 94 aa18.26■□□□□ 0.51
RUNDC3A-201ENST00000225441 C11orf44Q8N8P7 122 aa18.25■□□□□ 0.51
RUNDC3A-201ENST00000225441 DLX4Q92988 240 aaPredicted RBP18.25■□□□□ 0.51
RUNDC3A-201ENST00000225441 PEMTQ9UBM1 199 aa18.25■□□□□ 0.51
RUNDC3A-201ENST00000225441 TMEM223A0PJW6 202 aa18.24■□□□□ 0.51
RUNDC3A-201ENST00000225441 A8MWV9 139 aa18.24■□□□□ 0.51
RUNDC3A-201ENST00000225441 HIST2H2BDQ6DRA6 164 aa18.24■□□□□ 0.51
RUNDC3A-201ENST00000225441 IGHV3-30P01768 117 aa18.23■□□□□ 0.51
RUNDC3A-201ENST00000225441 IGHV3-30-5P0DP03 117 aa18.23■□□□□ 0.51
RUNDC3A-201ENST00000225441 WFDC2Q14508 124 aa18.23■□□□□ 0.51
RUNDC3A-201ENST00000225441 AMELXQ99217 191 aa18.23■□□□□ 0.51
RUNDC3A-201ENST00000225441 DEFB136Q30KP8 78 aa18.23■□□□□ 0.51
RUNDC3A-201ENST00000225441 CITED2Q99967 270 aaPredicted RBP18.22■□□□□ 0.51
RUNDC3A-201ENST00000225441 VCX2Q9H322 139 aa18.22■□□□□ 0.51
RUNDC3A-201ENST00000225441 UBE2D3P61077 147 aa18.21■□□□□ 0.51
RUNDC3A-201ENST00000225441 UBE2D2P62837 147 aa18.21■□□□□ 0.51
RUNDC3A-201ENST00000225441 NDUFA11Q86Y39 141 aa18.21■□□□□ 0.51
RUNDC3A-201ENST00000225441 ATP6V0E2Q8NHE4 81 aa18.21■□□□□ 0.51
RUNDC3A-201ENST00000225441 TSSC4Q9Y5U2 329 aaPredicted RBP18.21■□□□□ 0.51
RUNDC3A-201ENST00000225441 H3BMM0 161 aa18.21■□□□□ 0.51
RUNDC3A-201ENST00000225441 M0R2P5 195 aa18.21■□□□□ 0.51
RUNDC3A-201ENST00000225441 EMP1P54849 157 aa18.21■□□□□ 0.51
RUNDC3A-201ENST00000225441 TSPEAR-AS2P59090 65 aa18.2■□□□□ 0.5
RUNDC3A-201ENST00000225441 IGLV4-3A0A075B6K6 122 aa18.19■□□□□ 0.5
RUNDC3A-201ENST00000225441 TRBV20-1A0A075B6N2 111 aa18.19■□□□□ 0.5
RUNDC3A-201ENST00000225441 TSPAN13O95857 204 aa18.19■□□□□ 0.5
RUNDC3A-201ENST00000225441 ZNF415Q09FC8 603 aa18.19■□□□□ 0.5
RUNDC3A-201ENST00000225441 RHODO00212 210 aa18.19■□□□□ 0.5
RUNDC3A-201ENST00000225441 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18.19■□□□□ 0.5
RUNDC3A-201ENST00000225441 CLUHP3Q96NS8 147 aa18.19■□□□□ 0.5
RUNDC3A-201ENST00000225441 A0A1W2PRX2 142 aa18.18■□□□□ 0.5
RUNDC3A-201ENST00000225441 ZNF22P17026 224 aaPredicted RBP18.18■□□□□ 0.5
RUNDC3A-201ENST00000225441 DEFB131AP59861 70 aa18.18■□□□□ 0.5
RUNDC3A-201ENST00000225441 SLURP1P55000 103 aa18.17■□□□□ 0.5
RUNDC3A-201ENST00000225441 DUX3Q96PT4 197 aa18.17■□□□□ 0.5
RUNDC3A-201ENST00000225441 DNAJC30Q96LL9 226 aa18.16■□□□□ 0.5
RUNDC3A-201ENST00000225441 SPXQ9BT56 116 aa18.16■□□□□ 0.5
RUNDC3A-201ENST00000225441 KNCNA6PVL3 124 aa18.16■□□□□ 0.5
RUNDC3A-201ENST00000225441 RBMY1A1P0DJD3 496 aaKnown RBP18.16■□□□□ 0.5
RUNDC3A-201ENST00000225441 RBMY1CP0DJD4 496 aa18.16■□□□□ 0.5
RUNDC3A-201ENST00000225441 SCGB1A1P11684 91 aa18.16■□□□□ 0.5
RUNDC3A-201ENST00000225441 RBMY1FQ15415 496 aaKnown RBP18.16■□□□□ 0.5
RUNDC3A-201ENST00000225441 C10orf126Q8N4M7 172 aa18.16■□□□□ 0.5
RUNDC3A-201ENST00000225441 TNFRSF18Q9Y5U5 241 aa18.16■□□□□ 0.5
RUNDC3A-201ENST00000225441 C2CD3Q4AC94 2353 aa18.16■□□□□ 0.5
RUNDC3A-201ENST00000225441 KRTAP10-3P60369 221 aa18.15■□□□□ 0.5
RUNDC3A-201ENST00000225441 RAX2Q96IS3 184 aa18.15■□□□□ 0.5
RUNDC3A-201ENST00000225441 CFC1BP0CG36 223 aa18.14■□□□□ 0.5
RUNDC3A-201ENST00000225441 CFC1P0CG37 223 aa18.14■□□□□ 0.5
RUNDC3A-201ENST00000225441 ETDBQ3ZM63 59 aa18.14■□□□□ 0.5
RUNDC3A-201ENST00000225441 CFAP126Q5VTH2 177 aa18.14■□□□□ 0.5
RUNDC3A-201ENST00000225441 MRPS36P82909 103 aaKnown RBP18.14■□□□□ 0.49
RUNDC3A-201ENST00000225441 SPANXA1Q9NS26 97 aa18.14■□□□□ 0.49
RUNDC3A-201ENST00000225441 PRO1854Q9UHT4 67 aa18.14■□□□□ 0.49
RUNDC3A-201ENST00000225441 TMEM238C9JI98 176 aa18.13■□□□□ 0.49
RUNDC3A-201ENST00000225441 APOMO95445 188 aa18.13■□□□□ 0.49
RUNDC3A-201ENST00000225441 SETD2Q9BYW2 2564 aaPredicted RBP18.12■□□□□ 0.49
RUNDC3A-201ENST00000225441 FHL3Q13643 280 aa18.12■□□□□ 0.49
RUNDC3A-201ENST00000225441 OPRPNQ99935 248 aaPredicted RBP18.12■□□□□ 0.49
RUNDC3A-201ENST00000225441 SPATA25Q9BR10 227 aa18.12■□□□□ 0.49
RUNDC3A-201ENST00000225441 ADARB2-AS1A8MUL3 147 aa18.12■□□□□ 0.49
RUNDC3A-201ENST00000225441 NIPBLQ6KC79 2804 aaeCLIP18.11■□□□□ 0.49
RUNDC3A-201ENST00000225441 A0A0B4J2C4 111 aa18.11■□□□□ 0.49
RUNDC3A-201ENST00000225441 CCL24O00175 119 aa18.11■□□□□ 0.49
RUNDC3A-201ENST00000225441 BEAN1Q3B7T3 259 aa18.11■□□□□ 0.49
RUNDC3A-201ENST00000225441 DEFB104AQ8WTQ1 72 aa18.11■□□□□ 0.49
RUNDC3A-201ENST00000225441 SIGMAR1Q99720 223 aa18.11■□□□□ 0.49
RUNDC3A-201ENST00000225441 TRAV16A0A0A6YYK6 109 aaPredicted RBP18.1■□□□□ 0.49
RUNDC3A-201ENST00000225441 LOC107984156A0A0G2JMH3 177 aa18.1■□□□□ 0.49
RUNDC3A-201ENST00000225441 A0A0J9YXV3 536 aa18.1■□□□□ 0.49
RUNDC3A-201ENST00000225441 ARL17AQ8IVW1 177 aa18.1■□□□□ 0.49
RUNDC3A-201ENST00000225441 RBMY1BA6NDE4 496 aaKnown RBP18.09■□□□□ 0.49
RUNDC3A-201ENST00000225441 GAGE12HA6NDE8 117 aa18.09■□□□□ 0.49
RUNDC3A-201ENST00000225441 RBMY1EA6NEQ0 496 aaKnown RBP18.09■□□□□ 0.49
RUNDC3A-201ENST00000225441 RBMY1DP0C7P1 496 aaKnown RBP18.09■□□□□ 0.49
RUNDC3A-201ENST00000225441 SH2D6Q7Z4S9 175 aa18.09■□□□□ 0.49
RUNDC3A-201ENST00000225441 C1QTNF4Q9BXJ3 329 aa18.09■□□□□ 0.49
RUNDC3A-201ENST00000225441 TEP1Q99973 2627 aaKnown RBP18.09■□□□□ 0.49
RUNDC3A-201ENST00000225441 TRAV25A0A0B4J276 109 aa18.09■□□□□ 0.49
RUNDC3A-201ENST00000225441 PSMB2P49721 201 aa18.09■□□□□ 0.49
RUNDC3A-201ENST00000225441 TMEM61Q8N0U2 210 aa18.09■□□□□ 0.49
RUNDC3A-201ENST00000225441 DYNLRB2Q8TF09 96 aa18.09■□□□□ 0.49
RUNDC3A-201ENST00000225441 MAP6D1Q9H9H5 199 aa18.09■□□□□ 0.49
RUNDC3A-201ENST00000225441 SBSPONQ8IVN8 264 aa18.08■□□□□ 0.48
RUNDC3A-201ENST00000225441 TINCRA0A1B0GVN0 87 aa18.07■□□□□ 0.48
RUNDC3A-201ENST00000225441 INSP01308 110 aa18.07■□□□□ 0.48
RUNDC3A-201ENST00000225441 IGHV3-53P01767 116 aa18.07■□□□□ 0.48
RUNDC3A-201ENST00000225441 M0QXV9 152 aa18.07■□□□□ 0.48
RUNDC3A-201ENST00000225441 DEFB114Q30KQ6 69 aa18.07■□□□□ 0.48
RUNDC3A-201ENST00000225441 TIMM21Q9BVV7 248 aa18.06■□□□□ 0.48
RUNDC3A-201ENST00000225441 RS1O15537 224 aa18.05■□□□□ 0.48
RUNDC3A-201ENST00000225441 C11orf72Q8NBR9 251 aa18.05■□□□□ 0.48
RUNDC3A-201ENST00000225441 FAM104AQ969W3 186 aa18.05■□□□□ 0.48
RUNDC3A-201ENST00000225441 LINC01587Q99440 93 aa18.05■□□□□ 0.48
RUNDC3A-201ENST00000225441 JMJD1CQ15652 2540 aa18.04■□□□□ 0.48
RUNDC3A-201ENST00000225441 IGHV1-58A0A0C4DH39 117 aa18.04■□□□□ 0.48
RUNDC3A-201ENST00000225441 FOXI1Q12951 378 aa18.04■□□□□ 0.48
RUNDC3A-201ENST00000225441 CHCHD7Q9BUK0 85 aa18.04■□□□□ 0.48
RUNDC3A-201ENST00000225441 A0A0J9YXY3 114 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms