RNA–Protein interactions for RNA: ENST00000222690.10

H2AFV-201, Transcript of H2A histone family member V, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene H2AFV, Length 3,804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-201ENST00000222690 K7EMT4 169 aa12.69□□□□□ -0.38
H2AFV-201ENST00000222690 DEFB136Q30KP8 78 aa12.69□□□□□ -0.38
H2AFV-201ENST00000222690 NSUN5P1Q3KNT7 163 aa12.69□□□□□ -0.38
H2AFV-201ENST00000222690 ABCA12Q86UK0 2595 aa12.68□□□□□ -0.38
H2AFV-201ENST00000222690 DEFB131AP59861 70 aa12.68□□□□□ -0.38
H2AFV-201ENST00000222690 TMEM263Q8WUH6 116 aaKnown RBP12.68□□□□□ -0.38
H2AFV-201ENST00000222690 LRRK2Q5S007 2527 aa12.68□□□□□ -0.38
H2AFV-201ENST00000222690 EIF4EBP3O60516 100 aaPredicted RBP12.68□□□□□ -0.38
H2AFV-201ENST00000222690 HIST2H2BDQ6DRA6 164 aa12.68□□□□□ -0.38
H2AFV-201ENST00000222690 NDUFA12Q9UI09 145 aa12.68□□□□□ -0.38
H2AFV-201ENST00000222690 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.68□□□□□ -0.38
H2AFV-201ENST00000222690 RNF183Q96D59 192 aa12.68□□□□□ -0.38
H2AFV-201ENST00000222690 ATXN8Q156A1 80 aa12.67□□□□□ -0.38
H2AFV-201ENST00000222690 ZFAND6Q6FIF0 208 aa12.67□□□□□ -0.38
H2AFV-201ENST00000222690 CSMD2Q7Z408 3487 aa12.67□□□□□ -0.38
H2AFV-201ENST00000222690 ITPR1Q14643 2758 aa12.67□□□□□ -0.38
H2AFV-201ENST00000222690 TEX49A0A1B0GTD5 131 aa12.67□□□□□ -0.38
H2AFV-201ENST00000222690 SNCGO76070 127 aa12.67□□□□□ -0.38
H2AFV-201ENST00000222690 TRGV11A0A075B6L2 103 aa12.67□□□□□ -0.38
H2AFV-201ENST00000222690 K7EQG2 157 aa12.67□□□□□ -0.38
H2AFV-201ENST00000222690 ZNF625Q96I27 306 aaPredicted RBP12.67□□□□□ -0.38
H2AFV-201ENST00000222690 IGHV3OR16-12A0A075B7B8 117 aa12.66□□□□□ -0.38
H2AFV-201ENST00000222690 ANKRD17O75179 2603 aaKnown RBP12.66□□□□□ -0.38
H2AFV-201ENST00000222690 NAV2Q8IVL1 2488 aa12.66□□□□□ -0.38
H2AFV-201ENST00000222690 TMEM262E9PQX1 116 aa12.66□□□□□ -0.38
H2AFV-201ENST00000222690 M0R2P5 195 aa12.66□□□□□ -0.38
H2AFV-201ENST00000222690 LINC01620Q4KN68 170 aa12.66□□□□□ -0.38
H2AFV-201ENST00000222690 DGAT2L7PQ6IED9 249 aa12.66□□□□□ -0.38
H2AFV-201ENST00000222690 PSMB8P28062 276 aa12.66□□□□□ -0.38
H2AFV-201ENST00000222690 JMJD1CQ15652 2540 aa12.65□□□□□ -0.38
H2AFV-201ENST00000222690 TRIAP1O43715 76 aa12.65□□□□□ -0.38
H2AFV-201ENST00000222690 CCDC168Q8NDH2 2452 aa12.65□□□□□ -0.38
H2AFV-201ENST00000222690 HOXD3P31249 432 aaPredicted RBP12.65□□□□□ -0.38
H2AFV-201ENST00000222690 B4DSR2 109 aa12.64□□□□□ -0.39
H2AFV-201ENST00000222690 C2orf82Q6UX34 121 aa12.64□□□□□ -0.39
H2AFV-201ENST00000222690 DOPEY1Q5JWR5 2465 aa12.64□□□□□ -0.39
H2AFV-201ENST00000222690 ADAMTSL4-AS1Q5T5F5 129 aa12.64□□□□□ -0.39
H2AFV-201ENST00000222690 CLEC2BQ92478 149 aa12.64□□□□□ -0.39
H2AFV-201ENST00000222690 CFAP46Q8IYW2 2715 aa12.63□□□□□ -0.39
H2AFV-201ENST00000222690 COX6CP09669 75 aa12.63□□□□□ -0.39
H2AFV-201ENST00000222690 GAGE2BQ13066 116 aa12.63□□□□□ -0.39
H2AFV-201ENST00000222690 GAGE2EQ4V326 116 aa12.63□□□□□ -0.39
H2AFV-201ENST00000222690 GAGE2DQ9UEU5 116 aa12.63□□□□□ -0.39
H2AFV-201ENST00000222690 A0A0B4J2C4 111 aa12.63□□□□□ -0.39
H2AFV-201ENST00000222690 RBMY1A1P0DJD3 496 aaKnown RBP12.63□□□□□ -0.39
H2AFV-201ENST00000222690 RBMY1CP0DJD4 496 aa12.63□□□□□ -0.39
H2AFV-201ENST00000222690 GATA3P23771 443 aa12.63□□□□□ -0.39
H2AFV-201ENST00000222690 RBMY1FQ15415 496 aaKnown RBP12.63□□□□□ -0.39
H2AFV-201ENST00000222690 LINC01587Q99440 93 aa12.62□□□□□ -0.39
H2AFV-201ENST00000222690 EPG5Q9HCE0 2579 aa12.62□□□□□ -0.39
H2AFV-201ENST00000222690 TRAV8-4A0A0B4J246 113 aa12.61□□□□□ -0.39
H2AFV-201ENST00000222690 SLURP1P55000 103 aa12.61□□□□□ -0.39
H2AFV-201ENST00000222690 CFHR3Q02985 330 aa12.61□□□□□ -0.39
H2AFV-201ENST00000222690 TRAV4A0A0B4J268 109 aa12.6□□□□□ -0.39
H2AFV-201ENST00000222690 TTC32Q5I0X7 151 aa12.6□□□□□ -0.39
H2AFV-201ENST00000222690 Q6ZSN1 163 aa12.6□□□□□ -0.39
H2AFV-201ENST00000222690 ICOSQ9Y6W8 199 aa12.6□□□□□ -0.39
H2AFV-201ENST00000222690 C18orf65Q6ZTR6 163 aa12.59□□□□□ -0.39
H2AFV-201ENST00000222690 SBSPONQ8IVN8 264 aa12.59□□□□□ -0.39
H2AFV-201ENST00000222690 IGHV1-58A0A0C4DH39 117 aa12.59□□□□□ -0.39
H2AFV-201ENST00000222690 H3BMM0 161 aa12.59□□□□□ -0.39
H2AFV-201ENST00000222690 CRLF1O75462 422 aa12.59□□□□□ -0.39
H2AFV-201ENST00000222690 UBE2WQ96B02 151 aa12.59□□□□□ -0.39
H2AFV-201ENST00000222690 BRI3O95415 125 aa12.58□□□□□ -0.4
H2AFV-201ENST00000222690 ODF3Q96PU9 254 aa12.58□□□□□ -0.4
H2AFV-201ENST00000222690 PIEZO1Q92508 2521 aa12.58□□□□□ -0.4
H2AFV-201ENST00000222690 RPL13AP40429 203 aaKnown RBP12.58□□□□□ -0.4
H2AFV-201ENST00000222690 LINC00467Q9BRT7 94 aa12.58□□□□□ -0.4
H2AFV-201ENST00000222690 SS18L2Q9UHA2 77 aa12.58□□□□□ -0.4
H2AFV-201ENST00000222690 B5MCH6 92 aa12.57□□□□□ -0.4
H2AFV-201ENST00000222690 CDKN2A-AS1Q9UH64 79 aa12.57□□□□□ -0.4
H2AFV-201ENST00000222690 DYNLRB2Q8TF09 96 aa12.56□□□□□ -0.4
H2AFV-201ENST00000222690 TRBV10-2A0A0K0K1G8 114 aa12.56□□□□□ -0.4
H2AFV-201ENST00000222690 IGHV3-53P01767 116 aa12.56□□□□□ -0.4
H2AFV-201ENST00000222690 MRPS36P82909 103 aaKnown RBP12.56□□□□□ -0.4
H2AFV-201ENST00000222690 C15orf53Q8NAA6 179 aa12.56□□□□□ -0.4
H2AFV-201ENST00000222690 VSIG2Q96IQ7 327 aa12.56□□□□□ -0.4
H2AFV-201ENST00000222690 XCL2Q9UBD3 114 aa12.55□□□□□ -0.4
H2AFV-201ENST00000222690 MXRA5Q9NR99 2828 aa12.55□□□□□ -0.4
H2AFV-201ENST00000222690 TRAV13-1A0A0B4J241 112 aa12.55□□□□□ -0.4
H2AFV-201ENST00000222690 C11orf44Q8N8P7 122 aa12.55□□□□□ -0.4
H2AFV-201ENST00000222690 UBE2E2Q96LR5 201 aa12.55□□□□□ -0.4
H2AFV-201ENST00000222690 ZNF415Q09FC8 603 aa12.55□□□□□ -0.4
H2AFV-201ENST00000222690 TMEM61Q8N0U2 210 aa12.54□□□□□ -0.4
H2AFV-201ENST00000222690 MIAQ16674 131 aa12.54□□□□□ -0.4
H2AFV-201ENST00000222690 CHD6Q8TD26 2715 aa12.54□□□□□ -0.4
H2AFV-201ENST00000222690 TRBV30A0A0K0K1B3 111 aa12.54□□□□□ -0.4
H2AFV-201ENST00000222690 MEIG1Q5JSS6 88 aa12.53□□□□□ -0.4
H2AFV-201ENST00000222690 LITAFQ99732 161 aa12.53□□□□□ -0.4
H2AFV-201ENST00000222690 UBE2D4Q9Y2X8 147 aa12.53□□□□□ -0.4
H2AFV-201ENST00000222690 PYGO1Q9Y3Y4 419 aa12.53□□□□□ -0.4
H2AFV-201ENST00000222690 H7C423 109 aa12.52□□□□□ -0.4
H2AFV-201ENST00000222690 CIRBPQ14011 172 aaKnown RBP12.52□□□□□ -0.41
H2AFV-201ENST00000222690 Q9H8V8 135 aa12.52□□□□□ -0.41
H2AFV-201ENST00000222690 NDUFA7O95182 113 aa12.52□□□□□ -0.41
H2AFV-201ENST00000222690 CHCHD7Q9BUK0 85 aa12.52□□□□□ -0.41
H2AFV-201ENST00000222690 RBMY1BA6NDE4 496 aaKnown RBP12.51□□□□□ -0.41
H2AFV-201ENST00000222690 RBMY1EA6NEQ0 496 aaKnown RBP12.51□□□□□ -0.41
H2AFV-201ENST00000222690 RBMY1DP0C7P1 496 aaKnown RBP12.51□□□□□ -0.41
H2AFV-201ENST00000222690 IGKV3OR2-268A0A0C4DH90 116 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms