RNA–Protein interactions for RNA: ENST00000222214.9

GCDH-201, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-201ENST00000222214 ZNF25P17030 456 aaPredicted RBP12.67□□□□□ -0.38
GCDH-201ENST00000222214 COTL1Q14019 142 aa12.67□□□□□ -0.38
GCDH-201ENST00000222214 ORAOV1Q8WV07 137 aa12.67□□□□□ -0.38
GCDH-201ENST00000222214 PLAC8L1A1L4L8 177 aa12.66□□□□□ -0.38
GCDH-201ENST00000222214 GAGE1Q13065 139 aa12.66□□□□□ -0.38
GCDH-201ENST00000222214 VCX2Q9H322 139 aa12.66□□□□□ -0.38
GCDH-201ENST00000222214 SPANXA1Q9NS26 97 aa12.66□□□□□ -0.38
GCDH-201ENST00000222214 COX11Q9Y6N1 276 aa12.66□□□□□ -0.38
GCDH-201ENST00000222214 IGLV4-3A0A075B6K6 122 aa12.65□□□□□ -0.38
GCDH-201ENST00000222214 TRBV7-3A0A075B6L6 115 aa12.65□□□□□ -0.38
GCDH-201ENST00000222214 A6NDN8 102 aa12.65□□□□□ -0.38
GCDH-201ENST00000222214 C11orf86A6NJI1 115 aa12.65□□□□□ -0.38
GCDH-201ENST00000222214 K7EQD1 137 aa12.65□□□□□ -0.38
GCDH-201ENST00000222214 NFE4Q86UQ8 179 aa12.65□□□□□ -0.38
GCDH-201ENST00000222214 ZNF479Q96JC4 524 aa12.65□□□□□ -0.38
GCDH-201ENST00000222214 RPL36AP83881 106 aaKnown RBP12.65□□□□□ -0.38
GCDH-201ENST00000222214 RPL36ALQ969Q0 106 aaKnown RBP12.65□□□□□ -0.38
GCDH-201ENST00000222214 CHAC1Q9BUX1 264 aa12.65□□□□□ -0.38
GCDH-201ENST00000222214 CHCHD7Q9BUK0 85 aa12.64□□□□□ -0.39
GCDH-201ENST00000222214 MYMXA0A1B0GTQ4 84 aa12.63□□□□□ -0.39
GCDH-201ENST00000222214 TAL2Q16559 108 aa12.63□□□□□ -0.39
GCDH-201ENST00000222214 PRADC1Q9BSG0 188 aa12.63□□□□□ -0.39
GCDH-201ENST00000222214 TTTY13Q9BZ97 58 aa12.63□□□□□ -0.39
GCDH-201ENST00000222214 DAZ4Q86SG3 579 aaKnown RBP12.63□□□□□ -0.39
GCDH-201ENST00000222214 DAZ3Q9NR90 486 aaKnown RBP12.63□□□□□ -0.39
GCDH-201ENST00000222214 Q9UF83 564 aa12.63□□□□□ -0.39
GCDH-201ENST00000222214 HIVEP1P15822 2718 aa12.63□□□□□ -0.39
GCDH-201ENST00000222214 TRGV2A0A075B6R0 118 aa12.62□□□□□ -0.39
GCDH-201ENST00000222214 MAPKAPK5-AS1Q8N8E1 139 aa12.62□□□□□ -0.39
GCDH-201ENST00000222214 ZNRF2Q8NHG8 242 aa12.62□□□□□ -0.39
GCDH-201ENST00000222214 AMELXQ99217 191 aa12.62□□□□□ -0.39
GCDH-201ENST00000222214 SMIM9A6NGZ8 99 aa12.61□□□□□ -0.39
GCDH-201ENST00000222214 TAX1BP3O14907 124 aa12.61□□□□□ -0.39
GCDH-201ENST00000222214 TMEM170BQ5T4T1 132 aa12.61□□□□□ -0.39
GCDH-201ENST00000222214 OPRPNQ99935 248 aaPredicted RBP12.61□□□□□ -0.39
GCDH-201ENST00000222214 UBE2D4Q9Y2X8 147 aa12.61□□□□□ -0.39
GCDH-201ENST00000222214 TRBV6-4A0A1B0GX49 114 aa12.6□□□□□ -0.39
GCDH-201ENST00000222214 WFDC9Q8NEX5 89 aa12.6□□□□□ -0.39
GCDH-201ENST00000222214 PHLDA1Q8WV24 401 aaPredicted RBP12.6□□□□□ -0.39
GCDH-201ENST00000222214 TIMM21Q9BVV7 248 aa12.6□□□□□ -0.39
GCDH-201ENST00000222214 GAGE12BA1L429 117 aa12.6□□□□□ -0.39
GCDH-201ENST00000222214 GAGE7O76087 117 aa12.6□□□□□ -0.39
GCDH-201ENST00000222214 GAGE12FP0CL80 117 aa12.6□□□□□ -0.39
GCDH-201ENST00000222214 GAGE12GP0CL81 117 aa12.6□□□□□ -0.39
GCDH-201ENST00000222214 GAGE12IP0CL82 117 aa12.6□□□□□ -0.39
GCDH-201ENST00000222214 EMP1P54849 157 aa12.6□□□□□ -0.39
GCDH-201ENST00000222214 SLC25A29Q8N8R3 303 aa12.6□□□□□ -0.39
GCDH-201ENST00000222214 KIR2DL5BQ8NHK3 375 aa12.6□□□□□ -0.39
GCDH-201ENST00000222214 JMJD1CQ15652 2540 aa12.59□□□□□ -0.39
GCDH-201ENST00000222214 SMAGPQ0VAQ4 97 aa12.59□□□□□ -0.39
GCDH-201ENST00000222214 IGHV3-38A0A0C4DH36 116 aa12.58□□□□□ -0.4
GCDH-201ENST00000222214 UBE2D3P61077 147 aa12.58□□□□□ -0.4
GCDH-201ENST00000222214 UBE2D2P62837 147 aa12.58□□□□□ -0.4
GCDH-201ENST00000222214 WIPF1O43516 503 aa12.58□□□□□ -0.4
GCDH-201ENST00000222214 MRPS36P82909 103 aaKnown RBP12.58□□□□□ -0.4
GCDH-201ENST00000222214 TM2D2Q9BX73 214 aa12.58□□□□□ -0.4
GCDH-201ENST00000222214 ZNF815PA8K554 130 aa12.57□□□□□ -0.4
GCDH-201ENST00000222214 H3BRM9 83 aa12.57□□□□□ -0.4
GCDH-201ENST00000222214 CEND1Q8N111 149 aa12.57□□□□□ -0.4
GCDH-201ENST00000222214 GCSHP23434 173 aa12.56□□□□□ -0.4
GCDH-201ENST00000222214 APOC4P55056 127 aa12.56□□□□□ -0.4
GCDH-201ENST00000222214 FAM104AQ969W3 186 aa12.56□□□□□ -0.4
GCDH-201ENST00000222214 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.56□□□□□ -0.4
GCDH-201ENST00000222214 TRGV4A0A0C4DH28 118 aa12.56□□□□□ -0.4
GCDH-201ENST00000222214 TMEM223A0PJW6 202 aa12.56□□□□□ -0.4
GCDH-201ENST00000222214 IGKV2-29A2NJV5 120 aaPredicted RBP12.56□□□□□ -0.4
GCDH-201ENST00000222214 SPATA3Q8NHX4 192 aa12.56□□□□□ -0.4
GCDH-201ENST00000222214 GTSF1LQ9H1H1 148 aa12.56□□□□□ -0.4
GCDH-201ENST00000222214 ZNF22P17026 224 aaPredicted RBP12.55□□□□□ -0.4
GCDH-201ENST00000222214 LINC00612Q8N6U2 182 aa12.55□□□□□ -0.4
GCDH-201ENST00000222214 CSDC2Q9Y534 153 aaKnown RBP12.55□□□□□ -0.4
GCDH-201ENST00000222214 A0A0J9YXV3 536 aa12.54□□□□□ -0.4
GCDH-201ENST00000222214 DGAT2L7PQ6IED9 249 aa12.54□□□□□ -0.4
GCDH-201ENST00000222214 HIST1H4GQ99525 98 aa12.54□□□□□ -0.4
GCDH-201ENST00000222214 TINCRA0A1B0GVN0 87 aa12.54□□□□□ -0.4
GCDH-201ENST00000222214 LEPROTO15243 131 aa12.54□□□□□ -0.4
GCDH-201ENST00000222214 PTTG1IPP53801 180 aa12.54□□□□□ -0.4
GCDH-201ENST00000222214 SCGB1D4Q6XE38 83 aa12.54□□□□□ -0.4
GCDH-201ENST00000222214 FLNBO75369 2602 aaKnown RBP12.54□□□□□ -0.4
GCDH-201ENST00000222214 GAGE12JA6NER3 117 aa12.53□□□□□ -0.4
GCDH-201ENST00000222214 GAGE4Q13068 117 aa12.53□□□□□ -0.4
GCDH-201ENST00000222214 GAGE5Q13069 117 aa12.53□□□□□ -0.4
GCDH-201ENST00000222214 GAGE13Q4V321 117 aa12.53□□□□□ -0.4
GCDH-201ENST00000222214 CEMP1Q6PRD7 247 aaPredicted RBP12.53□□□□□ -0.4
GCDH-201ENST00000222214 Q6ZVH6 145 aa12.53□□□□□ -0.4
GCDH-201ENST00000222214 PLEKHB2Q96CS7 222 aa12.53□□□□□ -0.4
GCDH-201ENST00000222214 X6R8D5 127 aa12.53□□□□□ -0.4
GCDH-201ENST00000222214 J3QQQ9 107 aa12.52□□□□□ -0.4
GCDH-201ENST00000222214 LGALS3P17931 250 aaKnown RBP12.52□□□□□ -0.4
GCDH-201ENST00000222214 NIPBLQ6KC79 2804 aaeCLIP12.52□□□□□ -0.41
GCDH-201ENST00000222214 SMIM13P0DJ93 91 aa12.52□□□□□ -0.41
GCDH-201ENST00000222214 FXYD2P54710 66 aa12.52□□□□□ -0.41
GCDH-201ENST00000222214 FHL2Q14192 279 aa12.52□□□□□ -0.41
GCDH-201ENST00000222214 Q6ZUT4 128 aa12.52□□□□□ -0.41
GCDH-201ENST00000222214 H7C423 109 aa12.51□□□□□ -0.41
GCDH-201ENST00000222214 UBE2V1Q13404 147 aa12.51□□□□□ -0.41
GCDH-201ENST00000222214 VAMP3Q15836 100 aa12.51□□□□□ -0.41
GCDH-201ENST00000222214 NOTCH3Q9UM47 2321 aa12.51□□□□□ -0.41
GCDH-201ENST00000222214 C9orf118A6NHY6 69 aa12.5□□□□□ -0.41
GCDH-201ENST00000222214 LYRM9A8MSI8 78 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms