RNA–Protein interactions for RNA: ENST00000221899.7

CACTIN-201, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-201ENST00000221899 PRORYQ9H606 182 aa13.53□□□□□ -0.24
CACTIN-201ENST00000221899 USP9YO00507 2555 aaPredicted RBP13.52□□□□□ -0.24
CACTIN-201ENST00000221899 TRAV26-1A0A087WT03 109 aa13.52□□□□□ -0.24
CACTIN-201ENST00000221899 C18orf65Q6ZTR6 163 aa13.52□□□□□ -0.24
CACTIN-201ENST00000221899 IGHV3-38A0A0C4DH36 116 aa13.52□□□□□ -0.25
CACTIN-201ENST00000221899 TRIAP1O43715 76 aa13.52□□□□□ -0.25
CACTIN-201ENST00000221899 SLURP1P55000 103 aa13.51□□□□□ -0.25
CACTIN-201ENST00000221899 MRPS36P82909 103 aaKnown RBP13.51□□□□□ -0.25
CACTIN-201ENST00000221899 NDUFA12Q9UI09 145 aa13.51□□□□□ -0.25
CACTIN-201ENST00000221899 CFAP46Q8IYW2 2715 aa13.51□□□□□ -0.25
CACTIN-201ENST00000221899 ATXN8Q156A1 80 aa13.5□□□□□ -0.25
CACTIN-201ENST00000221899 LINC01620Q4KN68 170 aa13.5□□□□□ -0.25
CACTIN-201ENST00000221899 RBMY1BA6NDE4 496 aaKnown RBP13.5□□□□□ -0.25
CACTIN-201ENST00000221899 RBMY1EA6NEQ0 496 aaKnown RBP13.5□□□□□ -0.25
CACTIN-201ENST00000221899 RBMY1DP0C7P1 496 aaKnown RBP13.5□□□□□ -0.25
CACTIN-201ENST00000221899 PYGO1Q9Y3Y4 419 aa13.5□□□□□ -0.25
CACTIN-201ENST00000221899 IGHV1-58A0A0C4DH39 117 aa13.49□□□□□ -0.25
CACTIN-201ENST00000221899 HIST2H2BDQ6DRA6 164 aa13.49□□□□□ -0.25
CACTIN-201ENST00000221899 NACAE9PAV3 2078 aa13.49□□□□□ -0.25
CACTIN-201ENST00000221899 USP9XQ93008 2570 aaPredicted RBP13.49□□□□□ -0.25
CACTIN-201ENST00000221899 PKD1L2Q7Z442 2459 aa13.48□□□□□ -0.25
CACTIN-201ENST00000221899 POLQO75417 2590 aa13.48□□□□□ -0.25
CACTIN-201ENST00000221899 TEX49A0A1B0GTD5 131 aa13.48□□□□□ -0.25
CACTIN-201ENST00000221899 CHCHD7Q9BUK0 85 aa13.48□□□□□ -0.25
CACTIN-201ENST00000221899 DAND5Q8N907 189 aa13.48□□□□□ -0.25
CACTIN-201ENST00000221899 LINC00467Q9BRT7 94 aa13.47□□□□□ -0.25
CACTIN-201ENST00000221899 VSIG2Q96IQ7 327 aa13.47□□□□□ -0.25
CACTIN-201ENST00000221899 UBE2D4Q9Y2X8 147 aa13.47□□□□□ -0.25
CACTIN-201ENST00000221899 TMEM89A2RUT3 159 aa13.46□□□□□ -0.25
CACTIN-201ENST00000221899 TMEM262E9PQX1 116 aa13.46□□□□□ -0.25
CACTIN-201ENST00000221899 H3BMM0 161 aa13.46□□□□□ -0.25
CACTIN-201ENST00000221899 RNF183Q96D59 192 aa13.46□□□□□ -0.26
CACTIN-201ENST00000221899 LINC01356Q8N9X3 169 aa13.45□□□□□ -0.26
CACTIN-201ENST00000221899 ICOSQ9Y6W8 199 aa13.45□□□□□ -0.26
CACTIN-201ENST00000221899 TRBV30A0A0K0K1B3 111 aa13.45□□□□□ -0.26
CACTIN-201ENST00000221899 GATA3P23771 443 aa13.45□□□□□ -0.26
CACTIN-201ENST00000221899 UBE2E2Q96LR5 201 aa13.45□□□□□ -0.26
CACTIN-201ENST00000221899 ZNF702PQ9H963 129 aa13.45□□□□□ -0.26
CACTIN-201ENST00000221899 VPREB3Q9UKI3 123 aa13.45□□□□□ -0.26
CACTIN-201ENST00000221899 CLEC2BQ92478 149 aa13.44□□□□□ -0.26
CACTIN-201ENST00000221899 DOPEY1Q5JWR5 2465 aa13.44□□□□□ -0.26
CACTIN-201ENST00000221899 MXRA5Q9NR99 2828 aa13.44□□□□□ -0.26
CACTIN-201ENST00000221899 TINCRA0A1B0GVN0 87 aa13.44□□□□□ -0.26
CACTIN-201ENST00000221899 MIAQ16674 131 aa13.44□□□□□ -0.26
CACTIN-201ENST00000221899 ZFAND6Q6FIF0 208 aa13.43□□□□□ -0.26
CACTIN-201ENST00000221899 TMEM61Q8N0U2 210 aa13.43□□□□□ -0.26
CACTIN-201ENST00000221899 RNF152Q8N8N0 203 aa13.43□□□□□ -0.26
CACTIN-201ENST00000221899 LINC01587Q99440 93 aa13.43□□□□□ -0.26
CACTIN-201ENST00000221899 EDA2RQ9HAV5 297 aa13.43□□□□□ -0.26
CACTIN-201ENST00000221899 ZNF415Q09FC8 603 aa13.43□□□□□ -0.26
CACTIN-201ENST00000221899 TEX29Q8N6K0 151 aa13.43□□□□□ -0.26
CACTIN-201ENST00000221899 SPANXDQ9BXN6 97 aa13.43□□□□□ -0.26
CACTIN-201ENST00000221899 SPANXCQ9NY87 97 aa13.43□□□□□ -0.26
CACTIN-201ENST00000221899 TRBV10-2A0A0K0K1G8 114 aa13.42□□□□□ -0.26
CACTIN-201ENST00000221899 M0QXV9 152 aa13.42□□□□□ -0.26
CACTIN-201ENST00000221899 CRLF1O75462 422 aa13.42□□□□□ -0.26
CACTIN-201ENST00000221899 ANAPC13Q9BS18 74 aa13.42□□□□□ -0.26
CACTIN-201ENST00000221899 SPANXA1Q9NS26 97 aa13.42□□□□□ -0.26
CACTIN-201ENST00000221899 CDKN2A-AS1Q9UH64 79 aa13.42□□□□□ -0.26
CACTIN-201ENST00000221899 KHDC1LQ5JSQ8 128 aa13.42□□□□□ -0.26
CACTIN-201ENST00000221899 C2orf82Q6UX34 121 aa13.42□□□□□ -0.26
CACTIN-201ENST00000221899 CUBNO60494 3623 aa13.41□□□□□ -0.26
CACTIN-201ENST00000221899 ANKRD17O75179 2603 aaKnown RBP13.41□□□□□ -0.26
CACTIN-201ENST00000221899 TRAV4A0A0B4J268 109 aa13.41□□□□□ -0.26
CACTIN-201ENST00000221899 CENPEQ02224 2701 aa13.41□□□□□ -0.26
CACTIN-201ENST00000221899 A0A0U1RRA0 63 aa13.4□□□□□ -0.26
CACTIN-201ENST00000221899 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.4□□□□□ -0.26
CACTIN-201ENST00000221899 CITED1Q99966 193 aa13.4□□□□□ -0.26
CACTIN-201ENST00000221899 H7C423 109 aa13.39□□□□□ -0.27
CACTIN-201ENST00000221899 RPL13AP40429 203 aaKnown RBP13.39□□□□□ -0.27
CACTIN-201ENST00000221899 UBE2WQ96B02 151 aa13.39□□□□□ -0.27
CACTIN-201ENST00000221899 ZNF625Q96I27 306 aaPredicted RBP13.39□□□□□ -0.27
CACTIN-201ENST00000221899 TRAV8-4A0A0B4J246 113 aa13.39□□□□□ -0.27
CACTIN-201ENST00000221899 SNCGO76070 127 aa13.39□□□□□ -0.27
CACTIN-201ENST00000221899 C11orf72Q8NBR9 251 aa13.38□□□□□ -0.27
CACTIN-201ENST00000221899 IGHV3OR16-12A0A075B7B8 117 aa13.38□□□□□ -0.27
CACTIN-201ENST00000221899 MAP6D1Q9H9H5 199 aa13.38□□□□□ -0.27
CACTIN-201ENST00000221899 COX6CP09669 75 aa13.37□□□□□ -0.27
CACTIN-201ENST00000221899 COX6A2Q02221 97 aa13.37□□□□□ -0.27
CACTIN-201ENST00000221899 DGAT2L7PQ6IED9 249 aa13.37□□□□□ -0.27
CACTIN-201ENST00000221899 MYO18BQ8IUG5 2567 aa13.37□□□□□ -0.27
CACTIN-201ENST00000221899 Q6YL49 198 aa13.37□□□□□ -0.27
CACTIN-201ENST00000221899 TMEM101Q96IK0 257 aa13.37□□□□□ -0.27
CACTIN-201ENST00000221899 IGHV3-53P01767 116 aa13.37□□□□□ -0.27
CACTIN-201ENST00000221899 DSCR9P59020 149 aa13.37□□□□□ -0.27
CACTIN-201ENST00000221899 FBN2P35556 2912 aa13.36□□□□□ -0.27
CACTIN-201ENST00000221899 A0A096LNT2 108 aa13.36□□□□□ -0.27
CACTIN-201ENST00000221899 NDUFA7O95182 113 aa13.36□□□□□ -0.27
CACTIN-201ENST00000221899 GAGE2BQ13066 116 aa13.36□□□□□ -0.27
CACTIN-201ENST00000221899 GAGE2EQ4V326 116 aa13.36□□□□□ -0.27
CACTIN-201ENST00000221899 GAGE2DQ9UEU5 116 aa13.36□□□□□ -0.27
CACTIN-201ENST00000221899 MYO9AB2RTY4 2548 aa13.36□□□□□ -0.27
CACTIN-201ENST00000221899 DYNLRB2Q8TF09 96 aa13.36□□□□□ -0.27
CACTIN-201ENST00000221899 XCL2Q9UBD3 114 aa13.36□□□□□ -0.27
CACTIN-201ENST00000221899 A8MTW9 85 aa13.35□□□□□ -0.27
CACTIN-201ENST00000221899 YAE1D1Q9NRH1 226 aa13.34□□□□□ -0.27
CACTIN-201ENST00000221899 C15orf53Q8NAA6 179 aa13.33□□□□□ -0.27
CACTIN-201ENST00000221899 Q9H8V8 135 aa13.33□□□□□ -0.27
CACTIN-201ENST00000221899 ACACBO00763 2458 aa13.33□□□□□ -0.28
CACTIN-201ENST00000221899 FAM208BQ5VWN6 2430 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms