RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.68□□□□□ -0.7
CNOT3-201ENST00000221232 IGKV2-29A2NJV5 120 aaPredicted RBP10.68□□□□□ -0.7
CNOT3-201ENST00000221232 TSPAN13O95857 204 aa10.68□□□□□ -0.7
CNOT3-201ENST00000221232 RAX2Q96IS3 184 aa10.68□□□□□ -0.7
CNOT3-201ENST00000221232 JMJD1CQ15652 2540 aa10.68□□□□□ -0.7
CNOT3-201ENST00000221232 AKAP9Q99996 3911 aa10.68□□□□□ -0.7
CNOT3-201ENST00000221232 A0A1B0GWB2 263 aa10.68□□□□□ -0.7
CNOT3-201ENST00000221232 CR1P17927 2039 aa10.67□□□□□ -0.7
CNOT3-201ENST00000221232 TRAV8-3A0A0A6YYJ7 113 aa10.67□□□□□ -0.7
CNOT3-201ENST00000221232 A8MZ25 164 aa10.67□□□□□ -0.7
CNOT3-201ENST00000221232 NSUN5P1Q3KNT7 163 aa10.67□□□□□ -0.7
CNOT3-201ENST00000221232 MAP6D1Q9H9H5 199 aa10.67□□□□□ -0.7
CNOT3-201ENST00000221232 F8W1H4 67 aa10.67□□□□□ -0.7
CNOT3-201ENST00000221232 RHOHQ15669 191 aa10.67□□□□□ -0.7
CNOT3-201ENST00000221232 SPANXB1Q9NS25 103 aaPredicted RBP10.67□□□□□ -0.7
CNOT3-201ENST00000221232 UBR5O95071 2799 aaPredicted RBP10.67□□□□□ -0.7
CNOT3-201ENST00000221232 MTORP42345 2549 aa10.67□□□□□ -0.7
CNOT3-201ENST00000221232 CFC1BP0CG36 223 aa10.67□□□□□ -0.7
CNOT3-201ENST00000221232 CFC1P0CG37 223 aa10.67□□□□□ -0.7
CNOT3-201ENST00000221232 ZNF22P17026 224 aaPredicted RBP10.67□□□□□ -0.7
CNOT3-201ENST00000221232 ITPR3Q14573 2671 aa10.66□□□□□ -0.7
CNOT3-201ENST00000221232 IGHV3-30P01768 117 aa10.66□□□□□ -0.7
CNOT3-201ENST00000221232 IGHV3-30-5P0DP03 117 aa10.66□□□□□ -0.7
CNOT3-201ENST00000221232 TMEM223A0PJW6 202 aa10.66□□□□□ -0.7
CNOT3-201ENST00000221232 RHODO00212 210 aa10.66□□□□□ -0.7
CNOT3-201ENST00000221232 UBE2D1P51668 147 aa10.66□□□□□ -0.7
CNOT3-201ENST00000221232 NDUFA11Q86Y39 141 aa10.66□□□□□ -0.7
CNOT3-201ENST00000221232 PTH2Q96A98 100 aa10.66□□□□□ -0.7
CNOT3-201ENST00000221232 AMELXQ99217 191 aa10.66□□□□□ -0.7
CNOT3-201ENST00000221232 PEMTQ9UBM1 199 aa10.66□□□□□ -0.7
CNOT3-201ENST00000221232 M0R2P5 195 aa10.65□□□□□ -0.7
CNOT3-201ENST00000221232 SCGB1C2P0DMR2 95 aa10.65□□□□□ -0.7
CNOT3-201ENST00000221232 NPC2P61916 151 aa10.65□□□□□ -0.7
CNOT3-201ENST00000221232 SLC25A29Q8N8R3 303 aa10.65□□□□□ -0.7
CNOT3-201ENST00000221232 WFDC11Q8NEX6 87 aa10.65□□□□□ -0.7
CNOT3-201ENST00000221232 IGHV3-53P01767 116 aa10.65□□□□□ -0.7
CNOT3-201ENST00000221232 DEFB114Q30KQ6 69 aa10.65□□□□□ -0.7
CNOT3-201ENST00000221232 TSSC4Q9Y5U2 329 aaPredicted RBP10.65□□□□□ -0.7
CNOT3-201ENST00000221232 FLNAP21333 2647 aaKnown RBP10.64□□□□□ -0.71
CNOT3-201ENST00000221232 A4D1N5 150 aa10.64□□□□□ -0.71
CNOT3-201ENST00000221232 PRSS2P07478 247 aa10.64□□□□□ -0.71
CNOT3-201ENST00000221232 CFAP126Q5VTH2 177 aa10.64□□□□□ -0.71
CNOT3-201ENST00000221232 RNF152Q8N8N0 203 aa10.64□□□□□ -0.71
CNOT3-201ENST00000221232 SS18L2Q9UHA2 77 aa10.64□□□□□ -0.71
CNOT3-201ENST00000221232 NFE4Q86UQ8 179 aa10.63□□□□□ -0.71
CNOT3-201ENST00000221232 Q6ZSV7 163 aa10.63□□□□□ -0.71
CNOT3-201ENST00000221232 MUSTN1Q8IVN3 82 aa10.63□□□□□ -0.71
CNOT3-201ENST00000221232 C4orf3Q8WVX3 66 aa10.63□□□□□ -0.71
CNOT3-201ENST00000221232 FAM104AQ969W3 186 aa10.63□□□□□ -0.71
CNOT3-201ENST00000221232 PRO0461Q9UI25 63 aa10.63□□□□□ -0.71
CNOT3-201ENST00000221232 LEPROTO15243 131 aa10.63□□□□□ -0.71
CNOT3-201ENST00000221232 ZNF415Q09FC8 603 aa10.63□□□□□ -0.71
CNOT3-201ENST00000221232 SPINK8P0C7L1 97 aa10.62□□□□□ -0.71
CNOT3-201ENST00000221232 C10orf126Q8N4M7 172 aa10.62□□□□□ -0.71
CNOT3-201ENST00000221232 LINC00467Q9BRT7 94 aa10.62□□□□□ -0.71
CNOT3-201ENST00000221232 A8MWV9 139 aa10.61□□□□□ -0.71
CNOT3-201ENST00000221232 IGHV3-30-3P0DP02 117 aa10.61□□□□□ -0.71
CNOT3-201ENST00000221232 SMCPP49901 116 aaPredicted RBP10.61□□□□□ -0.71
CNOT3-201ENST00000221232 TCL1BO95988 128 aa10.61□□□□□ -0.71
CNOT3-201ENST00000221232 CKS1BP61024 79 aa10.61□□□□□ -0.71
CNOT3-201ENST00000221232 TRGV1A0A0A0MS02 117 aa10.6□□□□□ -0.71
CNOT3-201ENST00000221232 EIF4EBP3O60516 100 aaPredicted RBP10.6□□□□□ -0.71
CNOT3-201ENST00000221232 Q6ZUT4 128 aa10.6□□□□□ -0.71
CNOT3-201ENST00000221232 STHQ8IWL8 128 aa10.6□□□□□ -0.71
CNOT3-201ENST00000221232 TIMM21Q9BVV7 248 aa10.6□□□□□ -0.71
CNOT3-201ENST00000221232 ODF3L2Q3SX64 289 aa10.59□□□□□ -0.71
CNOT3-201ENST00000221232 C11orf72Q8NBR9 251 aa10.59□□□□□ -0.71
CNOT3-201ENST00000221232 CHCHD7Q9BUK0 85 aa10.59□□□□□ -0.71
CNOT3-201ENST00000221232 PRO1854Q9UHT4 67 aa10.59□□□□□ -0.71
CNOT3-201ENST00000221232 KRTAP1-3Q8IUG1 177 aa10.59□□□□□ -0.71
CNOT3-201ENST00000221232 Q8N2B8 174 aa10.59□□□□□ -0.71
CNOT3-201ENST00000221232 A0A1B0GV72 72 aa10.59□□□□□ -0.71
CNOT3-201ENST00000221232 DNAJC9-AS1A6NH13 148 aa10.59□□□□□ -0.71
CNOT3-201ENST00000221232 INSP01308 110 aa10.59□□□□□ -0.71
CNOT3-201ENST00000221232 Q1RN00 199 aa10.59□□□□□ -0.71
CNOT3-201ENST00000221232 ESM1Q9NQ30 184 aa10.59□□□□□ -0.71
CNOT3-201ENST00000221232 A0A0J9YXY3 114 aa10.58□□□□□ -0.72
CNOT3-201ENST00000221232 GAGE12HA6NDE8 117 aa10.58□□□□□ -0.72
CNOT3-201ENST00000221232 WFDC10AQ9H1F0 79 aa10.58□□□□□ -0.72
CNOT3-201ENST00000221232 NDUFA7O95182 113 aa10.58□□□□□ -0.72
CNOT3-201ENST00000221232 DAND5Q8N907 189 aa10.58□□□□□ -0.72
CNOT3-201ENST00000221232 A0A0U1RRA0 63 aa10.57□□□□□ -0.72
CNOT3-201ENST00000221232 DGAT2L7PQ6IED9 249 aa10.57□□□□□ -0.72
CNOT3-201ENST00000221232 CITED2Q99967 270 aaPredicted RBP10.57□□□□□ -0.72
CNOT3-201ENST00000221232 UBE2D4Q9Y2X8 147 aa10.57□□□□□ -0.72
CNOT3-201ENST00000221232 CCL24O00175 119 aa10.57□□□□□ -0.72
CNOT3-201ENST00000221232 HERV-K104P63124 156 aa10.57□□□□□ -0.72
CNOT3-201ENST00000221232 ADAMTSL4-AS1Q5T5F5 129 aa10.57□□□□□ -0.72
CNOT3-201ENST00000221232 UBE2D3P61077 147 aa10.56□□□□□ -0.72
CNOT3-201ENST00000221232 UBE2D2P62837 147 aa10.56□□□□□ -0.72
CNOT3-201ENST00000221232 C1orf158Q8N1D5 194 aa10.56□□□□□ -0.72
CNOT3-201ENST00000221232 J3QR89 54 aa10.56□□□□□ -0.72
CNOT3-201ENST00000221232 PLA2G2AP14555 144 aa10.56□□□□□ -0.72
CNOT3-201ENST00000221232 ZNF625Q96I27 306 aaPredicted RBP10.56□□□□□ -0.72
CNOT3-201ENST00000221232 GEMIN7Q9H840 131 aaKnown RBP10.56□□□□□ -0.72
CNOT3-201ENST00000221232 Q6ZTI0 123 aa10.55□□□□□ -0.72
CNOT3-201ENST00000221232 NDUFA12Q9UI09 145 aa10.55□□□□□ -0.72
CNOT3-201ENST00000221232 MRPS36P82909 103 aaKnown RBP10.55□□□□□ -0.72
CNOT3-201ENST00000221232 RPL35AP18077 110 aaKnown RBP10.55□□□□□ -0.72
CNOT3-201ENST00000221232 SIGMAR1Q99720 223 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms