RNA–Protein interactions for RNA: ENST00000215794.7

USP18-201, Transcript of ubiquitin specific peptidase 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP18, Length 2,129 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP18-201ENST00000215794 ANK2Q01484 3957 aa13.16□□□□□ -0.3
USP18-201ENST00000215794 NOTCH3Q9UM47 2321 aa13.16□□□□□ -0.3
USP18-201ENST00000215794 NACAE9PAV3 2078 aa13.15□□□□□ -0.3
USP18-201ENST00000215794 AZU1P20160 251 aa13.15□□□□□ -0.3
USP18-201ENST00000215794 EMP1P54849 157 aa13.15□□□□□ -0.3
USP18-201ENST00000215794 MRPL16Q9NX20 251 aaKnown RBP13.15□□□□□ -0.3
USP18-201ENST00000215794 Q9UF83 564 aa13.15□□□□□ -0.3
USP18-201ENST00000215794 IGHV3OR16-12A0A075B7B8 117 aa13.15□□□□□ -0.3
USP18-201ENST00000215794 Q6ZSN1 163 aa13.15□□□□□ -0.3
USP18-201ENST00000215794 CMYA5Q8N3K9 4069 aa13.14□□□□□ -0.31
USP18-201ENST00000215794 TRBV25-1A0A075B6N4 114 aa13.14□□□□□ -0.31
USP18-201ENST00000215794 H3BUT2 72 aa13.14□□□□□ -0.31
USP18-201ENST00000215794 WFDC10AQ9H1F0 79 aa13.14□□□□□ -0.31
USP18-201ENST00000215794 C1orf158Q8N1D5 194 aa13.13□□□□□ -0.31
USP18-201ENST00000215794 CFAP126Q5VTH2 177 aa13.13□□□□□ -0.31
USP18-201ENST00000215794 LINC00482Q8N8I6 264 aa13.13□□□□□ -0.31
USP18-201ENST00000215794 OPRPNQ99935 248 aaPredicted RBP13.13□□□□□ -0.31
USP18-201ENST00000215794 LINC00467Q9BRT7 94 aa13.13□□□□□ -0.31
USP18-201ENST00000215794 CHAC1Q9BUX1 264 aa13.13□□□□□ -0.31
USP18-201ENST00000215794 IGLV4-69A0A075B6H9 119 aa13.12□□□□□ -0.31
USP18-201ENST00000215794 A0A1W2PPM0 123 aa13.12□□□□□ -0.31
USP18-201ENST00000215794 A8MWV9 139 aa13.12□□□□□ -0.31
USP18-201ENST00000215794 I3L3M4 83 aa13.12□□□□□ -0.31
USP18-201ENST00000215794 SCGB1A1P11684 91 aa13.12□□□□□ -0.31
USP18-201ENST00000215794 FABP2P12104 132 aa13.12□□□□□ -0.31
USP18-201ENST00000215794 PKD1L1Q8TDX9 2849 aa13.12□□□□□ -0.31
USP18-201ENST00000215794 SMIM13P0DJ93 91 aa13.12□□□□□ -0.31
USP18-201ENST00000215794 TIMM17AQ99595 171 aa13.12□□□□□ -0.31
USP18-201ENST00000215794 HIGD1BQ9P298 99 aa13.12□□□□□ -0.31
USP18-201ENST00000215794 PMVKQ15126 192 aa13.11□□□□□ -0.31
USP18-201ENST00000215794 TMEM141Q96I45 108 aa13.11□□□□□ -0.31
USP18-201ENST00000215794 SPCS1Q9Y6A9 102 aa13.11□□□□□ -0.31
USP18-201ENST00000215794 C11orf86A6NJI1 115 aa13.1□□□□□ -0.31
USP18-201ENST00000215794 RHOHQ15669 191 aa13.1□□□□□ -0.31
USP18-201ENST00000215794 EDA2RQ9HAV5 297 aa13.1□□□□□ -0.31
USP18-201ENST00000215794 IGLV1-51P01701 117 aa13.09□□□□□ -0.31
USP18-201ENST00000215794 C20orf203Q8NBC4 194 aa13.09□□□□□ -0.31
USP18-201ENST00000215794 LINC01549A6NIU2 74 aa13.09□□□□□ -0.31
USP18-201ENST00000215794 GCSHP23434 173 aa13.08□□□□□ -0.32
USP18-201ENST00000215794 PIK3CD-AS1Q5SR53 167 aa13.08□□□□□ -0.32
USP18-201ENST00000215794 SHISA2Q6UWI4 295 aa13.08□□□□□ -0.32
USP18-201ENST00000215794 OR11H2Q8NH07 326 aa13.08□□□□□ -0.32
USP18-201ENST00000215794 PTH2Q96A98 100 aa13.08□□□□□ -0.32
USP18-201ENST00000215794 PRADC1Q9BSG0 188 aa13.08□□□□□ -0.32
USP18-201ENST00000215794 SPXQ9BT56 116 aa13.08□□□□□ -0.32
USP18-201ENST00000215794 FXYD2P54710 66 aa13.07□□□□□ -0.32
USP18-201ENST00000215794 BEAN1Q3B7T3 259 aa13.07□□□□□ -0.32
USP18-201ENST00000215794 E9PLD3 99 aa13.07□□□□□ -0.32
USP18-201ENST00000215794 GIG44P09565 113 aaPredicted RBP13.07□□□□□ -0.32
USP18-201ENST00000215794 SAMD5Q5TGI4 173 aa13.07□□□□□ -0.32
USP18-201ENST00000215794 ZNRF2Q8NHG8 242 aa13.07□□□□□ -0.32
USP18-201ENST00000215794 TNFRSF18Q9Y5U5 241 aa13.07□□□□□ -0.32
USP18-201ENST00000215794 C19orf73Q9NVV2 129 aa13.06□□□□□ -0.32
USP18-201ENST00000215794 J3QR89 54 aa13.06□□□□□ -0.32
USP18-201ENST00000215794 IL17DQ8TAD2 202 aa13.06□□□□□ -0.32
USP18-201ENST00000215794 NAA38Q9BRA0 125 aaKnown RBP13.06□□□□□ -0.32
USP18-201ENST00000215794 MYMXA0A1B0GTQ4 84 aa13.05□□□□□ -0.32
USP18-201ENST00000215794 RS1O15537 224 aa13.05□□□□□ -0.32
USP18-201ENST00000215794 RPL35AP18077 110 aaKnown RBP13.05□□□□□ -0.32
USP18-201ENST00000215794 RAB37Q96AX2 223 aa13.05□□□□□ -0.32
USP18-201ENST00000215794 TRGV1A0A0A0MS02 117 aa13.04□□□□□ -0.32
USP18-201ENST00000215794 IGHV3-38A0A0C4DH36 116 aa13.04□□□□□ -0.32
USP18-201ENST00000215794 IGLV4-3A0A075B6K6 122 aa13.03□□□□□ -0.32
USP18-201ENST00000215794 RHODO00212 210 aa13.03□□□□□ -0.32
USP18-201ENST00000215794 IGHV3-53P01767 116 aa13.03□□□□□ -0.32
USP18-201ENST00000215794 CEMP1Q6PRD7 247 aaPredicted RBP13.03□□□□□ -0.32
USP18-201ENST00000215794 CEND1Q8N111 149 aa13.03□□□□□ -0.32
USP18-201ENST00000215794 PHLDA1Q8WV24 401 aaPredicted RBP13.03□□□□□ -0.32
USP18-201ENST00000215794 TMEM170BQ5T4T1 132 aa13.02□□□□□ -0.33
USP18-201ENST00000215794 Q6ZTI0 123 aa13.02□□□□□ -0.33
USP18-201ENST00000215794 FAM104AQ969W3 186 aa13.02□□□□□ -0.33
USP18-201ENST00000215794 A0A1B0GV72 72 aa13.01□□□□□ -0.33
USP18-201ENST00000215794 K7ERJ3 54 aa13.01□□□□□ -0.33
USP18-201ENST00000215794 TAL2Q16559 108 aa13.01□□□□□ -0.33
USP18-201ENST00000215794 PAPPA-AS1Q5QFB9 102 aa13.01□□□□□ -0.33
USP18-201ENST00000215794 SIGMAR1Q99720 223 aa13.01□□□□□ -0.33
USP18-201ENST00000215794 ZNF815PA8K554 130 aa13.01□□□□□ -0.33
USP18-201ENST00000215794 F8W1H4 67 aa13.01□□□□□ -0.33
USP18-201ENST00000215794 PLEKHB2Q96CS7 222 aa13.01□□□□□ -0.33
USP18-201ENST00000215794 ZNF479Q96JC4 524 aa13.01□□□□□ -0.33
USP18-201ENST00000215794 CHCHD7Q9BUK0 85 aa13.01□□□□□ -0.33
USP18-201ENST00000215794 TSPEAR-AS2P59090 65 aa13□□□□□ -0.33
USP18-201ENST00000215794 TMEM263Q8WUH6 116 aaKnown RBP13□□□□□ -0.33
USP18-201ENST00000215794 TM2D2Q9BX73 214 aa13□□□□□ -0.33
USP18-201ENST00000215794 CMC4P56277 68 aaPredicted RBP13□□□□□ -0.33
USP18-201ENST00000215794 RNASE13Q5GAN3 156 aaKnown RBP13□□□□□ -0.33
USP18-201ENST00000215794 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.99□□□□□ -0.33
USP18-201ENST00000215794 IGKV2-29A2NJV5 120 aaPredicted RBP12.99□□□□□ -0.33
USP18-201ENST00000215794 RPL24P83731 157 aaKnown RBP12.99□□□□□ -0.33
USP18-201ENST00000215794 HIST1H4GQ99525 98 aa12.99□□□□□ -0.33
USP18-201ENST00000215794 DNHD1Q96M86 4753 aa12.99□□□□□ -0.33
USP18-201ENST00000215794 TRBV7-3A0A075B6L6 115 aa12.98□□□□□ -0.33
USP18-201ENST00000215794 HERVK_113P61574 105 aa12.98□□□□□ -0.33
USP18-201ENST00000215794 OXLD1Q5BKU9 147 aa12.98□□□□□ -0.33
USP18-201ENST00000215794 NFE4Q86UQ8 179 aa12.98□□□□□ -0.33
USP18-201ENST00000215794 FAM110AQ9BQ89 295 aa12.98□□□□□ -0.33
USP18-201ENST00000215794 VCX2Q9H322 139 aa12.98□□□□□ -0.33
USP18-201ENST00000215794 NOP10Q9NPE3 64 aaKnown RBP12.98□□□□□ -0.33
USP18-201ENST00000215794 NHP2Q9NX24 153 aaKnown RBP12.98□□□□□ -0.33
USP18-201ENST00000215794 A0A0J9YXV3 536 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms