RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 MRPL53Q96EL3 112 aaKnown RBP12.43□□□□□ -0.42
CTDP1-201ENST00000075430 NDUFA12Q9UI09 145 aa12.43□□□□□ -0.42
CTDP1-201ENST00000075430 GAGE5Q13069 117 aa12.42□□□□□ -0.42
CTDP1-201ENST00000075430 GAGE6Q13070 117 aa12.42□□□□□ -0.42
CTDP1-201ENST00000075430 TMEM262E9PQX1 116 aa12.42□□□□□ -0.42
CTDP1-201ENST00000075430 ATXN8Q156A1 80 aa12.42□□□□□ -0.42
CTDP1-201ENST00000075430 ATP6V0E2Q8NHE4 81 aa12.42□□□□□ -0.42
CTDP1-201ENST00000075430 A0A0J9YXY3 114 aa12.42□□□□□ -0.42
CTDP1-201ENST00000075430 DEFB136Q30KP8 78 aa12.42□□□□□ -0.42
CTDP1-201ENST00000075430 KIF25-AS1Q9Y6Z4 181 aa12.42□□□□□ -0.42
CTDP1-201ENST00000075430 PRB1P04280 392 aa12.41□□□□□ -0.42
CTDP1-201ENST00000075430 TMEM141Q96I45 108 aa12.41□□□□□ -0.42
CTDP1-201ENST00000075430 TNFRSF18Q9Y5U5 241 aa12.41□□□□□ -0.42
CTDP1-201ENST00000075430 M0R2P5 195 aa12.41□□□□□ -0.42
CTDP1-201ENST00000075430 H3BMM0 161 aa12.4□□□□□ -0.42
CTDP1-201ENST00000075430 TMEM263Q8WUH6 116 aaKnown RBP12.4□□□□□ -0.42
CTDP1-201ENST00000075430 UBE2WQ96B02 151 aa12.4□□□□□ -0.42
CTDP1-201ENST00000075430 HIVEP2P31629 2446 aa12.4□□□□□ -0.42
CTDP1-201ENST00000075430 FAM223BA6NKX1 122 aa12.4□□□□□ -0.42
CTDP1-201ENST00000075430 M0QY20 66 aa12.4□□□□□ -0.42
CTDP1-201ENST00000075430 FAM223AQ8IWN6 122 aa12.4□□□□□ -0.42
CTDP1-201ENST00000075430 LENEPQ9Y5L5 61 aa12.4□□□□□ -0.42
CTDP1-201ENST00000075430 NIPBLQ6KC79 2804 aaeCLIP12.4□□□□□ -0.42
CTDP1-201ENST00000075430 CHCHD5Q9BSY4 110 aa12.4□□□□□ -0.43
CTDP1-201ENST00000075430 IGSF10Q6WRI0 2623 aa12.39□□□□□ -0.43
CTDP1-201ENST00000075430 IGLV4-3A0A075B6K6 122 aa12.39□□□□□ -0.43
CTDP1-201ENST00000075430 TMEM223A0PJW6 202 aa12.39□□□□□ -0.43
CTDP1-201ENST00000075430 SOCS3O14543 225 aa12.39□□□□□ -0.43
CTDP1-201ENST00000075430 IGHV3-53P01767 116 aa12.39□□□□□ -0.43
CTDP1-201ENST00000075430 NDUFV3P56181 108 aaKnown RBP12.39□□□□□ -0.43
CTDP1-201ENST00000075430 LEPROTO15243 131 aa12.39□□□□□ -0.43
CTDP1-201ENST00000075430 C11orf44Q8N8P7 122 aa12.39□□□□□ -0.43
CTDP1-201ENST00000075430 C20orf203Q8NBC4 194 aa12.38□□□□□ -0.43
CTDP1-201ENST00000075430 TIMM17AQ99595 171 aa12.38□□□□□ -0.43
CTDP1-201ENST00000075430 NBEAL2Q6ZNJ1 2754 aa12.38□□□□□ -0.43
CTDP1-201ENST00000075430 COX6CP09669 75 aa12.38□□□□□ -0.43
CTDP1-201ENST00000075430 IFITM1P13164 125 aa12.38□□□□□ -0.43
CTDP1-201ENST00000075430 RPL13AP40429 203 aaKnown RBP12.38□□□□□ -0.43
CTDP1-201ENST00000075430 SNRPD3P62318 126 aaKnown RBP12.38□□□□□ -0.43
CTDP1-201ENST00000075430 AMELXQ99217 191 aa12.38□□□□□ -0.43
CTDP1-201ENST00000075430 IGHV1OR15-1A0A075B7D0 117 aa12.37□□□□□ -0.43
CTDP1-201ENST00000075430 I3L3M4 83 aa12.37□□□□□ -0.43
CTDP1-201ENST00000075430 TRAV13-1A0A0B4J241 112 aa12.37□□□□□ -0.43
CTDP1-201ENST00000075430 GAGE12JA6NER3 117 aa12.37□□□□□ -0.43
CTDP1-201ENST00000075430 GAGE7O76087 117 aa12.37□□□□□ -0.43
CTDP1-201ENST00000075430 NDUFA7O95182 113 aa12.37□□□□□ -0.43
CTDP1-201ENST00000075430 GAGE12FP0CL80 117 aa12.37□□□□□ -0.43
CTDP1-201ENST00000075430 GAGE12GP0CL81 117 aa12.37□□□□□ -0.43
CTDP1-201ENST00000075430 GAGE12IP0CL82 117 aa12.37□□□□□ -0.43
CTDP1-201ENST00000075430 GAGE4Q13068 117 aa12.37□□□□□ -0.43
CTDP1-201ENST00000075430 LINC01619G3V211 115 aa12.36□□□□□ -0.43
CTDP1-201ENST00000075430 IGHV4-59P01825 116 aa12.36□□□□□ -0.43
CTDP1-201ENST00000075430 ICOSQ9Y6W8 199 aa12.36□□□□□ -0.43
CTDP1-201ENST00000075430 TEX15Q9BXT5 2789 aa12.36□□□□□ -0.43
CTDP1-201ENST00000075430 HOXD3P31249 432 aaPredicted RBP12.36□□□□□ -0.43
CTDP1-201ENST00000075430 DEFB131AP59861 70 aa12.36□□□□□ -0.43
CTDP1-201ENST00000075430 MXRA5Q9NR99 2828 aa12.35□□□□□ -0.43
CTDP1-201ENST00000075430 TRBV27A0A0K0K1C4 114 aa12.35□□□□□ -0.43
CTDP1-201ENST00000075430 NHLRC4P0CG21 123 aaPredicted RBP12.35□□□□□ -0.43
CTDP1-201ENST00000075430 MEIG1Q5JSS6 88 aa12.35□□□□□ -0.43
CTDP1-201ENST00000075430 IGHV4OR15-8A0A075B7B6 117 aa12.34□□□□□ -0.43
CTDP1-201ENST00000075430 A0A087WW49 117 aa12.34□□□□□ -0.43
CTDP1-201ENST00000075430 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.34□□□□□ -0.43
CTDP1-201ENST00000075430 MSMBP08118 114 aa12.34□□□□□ -0.43
CTDP1-201ENST00000075430 AVPP01185 164 aa12.34□□□□□ -0.43
CTDP1-201ENST00000075430 HERV-K104P63124 156 aa12.33□□□□□ -0.43
CTDP1-201ENST00000075430 POM121L12Q8N7R1 296 aa12.33□□□□□ -0.43
CTDP1-201ENST00000075430 UBE2E2Q96LR5 201 aa12.33□□□□□ -0.43
CTDP1-201ENST00000075430 KLLNB2CW77 178 aa12.33□□□□□ -0.44
CTDP1-201ENST00000075430 H7C423 109 aa12.32□□□□□ -0.44
CTDP1-201ENST00000075430 DCANP1Q8TF63 244 aa12.32□□□□□ -0.44
CTDP1-201ENST00000075430 TOMM7Q9P0U1 55 aa12.32□□□□□ -0.44
CTDP1-201ENST00000075430 CDKN2A-AS1Q9UH64 79 aa12.32□□□□□ -0.44
CTDP1-201ENST00000075430 CFHR3Q02985 330 aa12.32□□□□□ -0.44
CTDP1-201ENST00000075430 APRG1Q8IVJ8 170 aa12.32□□□□□ -0.44
CTDP1-201ENST00000075430 Q6ZSN1 163 aa12.32□□□□□ -0.44
CTDP1-201ENST00000075430 LINC01587Q99440 93 aa12.31□□□□□ -0.44
CTDP1-201ENST00000075430 C10orf105Q8TEF2 133 aa12.31□□□□□ -0.44
CTDP1-201ENST00000075430 USMG5Q96IX5 58 aa12.31□□□□□ -0.44
CTDP1-201ENST00000075430 ODF3Q96PU9 254 aa12.31□□□□□ -0.44
CTDP1-201ENST00000075430 TRBV10-2A0A0K0K1G8 114 aa12.31□□□□□ -0.44
CTDP1-201ENST00000075430 DEFB112Q30KQ8 113 aa12.31□□□□□ -0.44
CTDP1-201ENST00000075430 TRGV11A0A075B6L2 103 aa12.3□□□□□ -0.44
CTDP1-201ENST00000075430 A0A0J9YX75 114 aa12.3□□□□□ -0.44
CTDP1-201ENST00000075430 LGALS9O00182 355 aa12.29□□□□□ -0.44
CTDP1-201ENST00000075430 NXPH4O95158 308 aa12.29□□□□□ -0.44
CTDP1-201ENST00000075430 Q9H8V8 135 aa12.29□□□□□ -0.44
CTDP1-201ENST00000075430 C18orf65Q6ZTR6 163 aa12.29□□□□□ -0.44
CTDP1-201ENST00000075430 LINC00467Q9BRT7 94 aa12.29□□□□□ -0.44
CTDP1-201ENST00000075430 XCL2Q9UBD3 114 aa12.29□□□□□ -0.44
CTDP1-201ENST00000075430 IGHG2P01859 326 aa12.28□□□□□ -0.44
CTDP1-201ENST00000075430 RBMY1A1P0DJD3 496 aaKnown RBP12.28□□□□□ -0.44
CTDP1-201ENST00000075430 RBMY1CP0DJD4 496 aa12.28□□□□□ -0.44
CTDP1-201ENST00000075430 RBMY1FQ15415 496 aaKnown RBP12.28□□□□□ -0.44
CTDP1-201ENST00000075430 Q9HAA7 133 aa12.28□□□□□ -0.44
CTDP1-201ENST00000075430 CITED1Q99966 193 aa12.27□□□□□ -0.44
CTDP1-201ENST00000075430 C11orf68Q9H3H3 251 aaKnown RBP12.27□□□□□ -0.44
CTDP1-201ENST00000075430 FAM236AA0A1B0GUQ0 79 aa12.27□□□□□ -0.45
CTDP1-201ENST00000075430 FAM236BA0A1B0GV22 79 aa12.27□□□□□ -0.45
CTDP1-201ENST00000075430 B4DSR2 109 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms