RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 PFDN1O60925 122 aa12.01□□□□□ -0.49
CLN6-220ENST00000637450 SPANXN1Q5VSR9 72 aa12.01□□□□□ -0.49
CLN6-220ENST00000637450 CRPP02741 224 aa12□□□□□ -0.49
CLN6-220ENST00000637450 ANGP03950 147 aaKnown RBP12□□□□□ -0.49
CLN6-220ENST00000637450 TMUB2Q71RG4 321 aa12□□□□□ -0.49
CLN6-220ENST00000637450 SREK1IP1Q8N9Q2 155 aaPredicted RBP12□□□□□ -0.49
CLN6-220ENST00000637450 CHCHD5Q9BSY4 110 aa12□□□□□ -0.49
CLN6-220ENST00000637450 KIF25-AS1Q9Y6Z4 181 aa12□□□□□ -0.49
CLN6-220ENST00000637450 F5H697 171 aa11.99□□□□□ -0.49
CLN6-220ENST00000637450 PKIAP61925 76 aa11.99□□□□□ -0.49
CLN6-220ENST00000637450 NTM-AS1Q6ZSK4 140 aa11.99□□□□□ -0.49
CLN6-220ENST00000637450 VAX2Q9UIW0 290 aa11.99□□□□□ -0.49
CLN6-220ENST00000637450 HMCN2Q8NDA2 5059 aa11.98□□□□□ -0.49
CLN6-220ENST00000637450 HMSDA8MTL9 139 aa11.98□□□□□ -0.49
CLN6-220ENST00000637450 H2AFB1P0C5Y9 115 aa11.98□□□□□ -0.49
CLN6-220ENST00000637450 SSTP61278 116 aa11.98□□□□□ -0.49
CLN6-220ENST00000637450 MIAQ16674 131 aa11.98□□□□□ -0.49
CLN6-220ENST00000637450 TMEM97Q5BJF2 176 aa11.98□□□□□ -0.49
CLN6-220ENST00000637450 A0A0D9SG52 128 aa11.97□□□□□ -0.49
CLN6-220ENST00000637450 USP17L23D6RBM5 183 aa11.97□□□□□ -0.49
CLN6-220ENST00000637450 IGLV2-8P01709 118 aa11.97□□□□□ -0.49
CLN6-220ENST00000637450 RPL35P42766 123 aaKnown RBP11.97□□□□□ -0.49
CLN6-220ENST00000637450 BCL2L11O43521 198 aa11.96□□□□□ -0.49
CLN6-220ENST00000637450 SMIM17P0DL12 118 aa11.96□□□□□ -0.49
CLN6-220ENST00000637450 DERL1Q9BUN8 251 aa11.96□□□□□ -0.49
CLN6-220ENST00000637450 PRR34Q9NV39 138 aa11.96□□□□□ -0.49
CLN6-220ENST00000637450 PKHD1L1Q86WI1 4243 aa11.96□□□□□ -0.5
CLN6-220ENST00000637450 KANTRA0A1W2PQU2 76 aa11.95□□□□□ -0.5
CLN6-220ENST00000637450 PRSS1P07477 247 aa11.95□□□□□ -0.5
CLN6-220ENST00000637450 RBX1P62877 108 aa11.95□□□□□ -0.5
CLN6-220ENST00000637450 AP1S3Q96PC3 154 aa11.95□□□□□ -0.5
CLN6-220ENST00000637450 HLA-DQA1P01909 254 aa11.94□□□□□ -0.5
CLN6-220ENST00000637450 CCL20P78556 96 aa11.94□□□□□ -0.5
CLN6-220ENST00000637450 DGAT2L7PQ6IED9 249 aa11.94□□□□□ -0.5
CLN6-220ENST00000637450 KRTAP26-1Q6PEX3 210 aa11.94□□□□□ -0.5
CLN6-220ENST00000637450 TRBV25-1A0A075B6N4 114 aa11.93□□□□□ -0.5
CLN6-220ENST00000637450 EIF5AP63241 154 aaKnown RBP11.93□□□□□ -0.5
CLN6-220ENST00000637450 GAGE6Q13070 117 aa11.93□□□□□ -0.5
CLN6-220ENST00000637450 LINC00269Q8N2A0 174 aa11.93□□□□□ -0.5
CLN6-220ENST00000637450 C11orf52Q96A22 123 aa11.93□□□□□ -0.5
CLN6-220ENST00000637450 M0QY20 66 aa11.92□□□□□ -0.5
CLN6-220ENST00000637450 OXTP01178 125 aa11.92□□□□□ -0.5
CLN6-220ENST00000637450 IGLC6P0CF74 106 aa11.92□□□□□ -0.5
CLN6-220ENST00000637450 IQCJQ1A5X6 159 aa11.92□□□□□ -0.5
CLN6-220ENST00000637450 MANBALQ9NQG1 85 aa11.92□□□□□ -0.5
CLN6-220ENST00000637450 TRAV1-1A0A0B4J248 108 aa11.91□□□□□ -0.5
CLN6-220ENST00000637450 GZMBP10144 247 aa11.91□□□□□ -0.5
CLN6-220ENST00000637450 CLPSL2Q6UWE3 100 aa11.91□□□□□ -0.5
CLN6-220ENST00000637450 C9orf163Q8N9P6 203 aa11.91□□□□□ -0.5
CLN6-220ENST00000637450 GNG13Q9P2W3 67 aa11.91□□□□□ -0.5
CLN6-220ENST00000637450 IGHV1-24A0A0C4DH33 117 aa11.9□□□□□ -0.5
CLN6-220ENST00000637450 C19orf71A6NCJ1 209 aa11.9□□□□□ -0.5
CLN6-220ENST00000637450 RPS20P60866 119 aaKnown RBP11.9□□□□□ -0.5
CLN6-220ENST00000637450 CENPWQ5EE01 88 aa11.9□□□□□ -0.5
CLN6-220ENST00000637450 FER1L6-AS1Q8NA97 138 aa11.9□□□□□ -0.5
CLN6-220ENST00000637450 DAZAP1Q96EP5 407 aaKnown RBP11.9□□□□□ -0.5
CLN6-220ENST00000637450 TPPP3Q9BW30 176 aa11.9□□□□□ -0.5
CLN6-220ENST00000637450 H7C1H1 209 aa11.89□□□□□ -0.51
CLN6-220ENST00000637450 MGPP08493 103 aa11.89□□□□□ -0.51
CLN6-220ENST00000637450 CACNG7P62955 275 aa11.89□□□□□ -0.51
CLN6-220ENST00000637450 SUMO4Q6EEV6 95 aa11.89□□□□□ -0.51
CLN6-220ENST00000637450 OR2D3Q8NGH3 330 aa11.89□□□□□ -0.51
CLN6-220ENST00000637450 RPL37AP61513 92 aaKnown RBP11.88□□□□□ -0.51
CLN6-220ENST00000637450 REG3AQ06141 175 aa11.88□□□□□ -0.51
CLN6-220ENST00000637450 SERTAD4-AS1Q5TG53 156 aa11.88□□□□□ -0.51
CLN6-220ENST00000637450 CLRN3Q8NCR9 226 aa11.88□□□□□ -0.51
CLN6-220ENST00000637450 RAB19A4D1S5 217 aa11.87□□□□□ -0.51
CLN6-220ENST00000637450 RAB5CP51148 216 aa11.87□□□□□ -0.51
CLN6-220ENST00000637450 SDIM1Q6ZPB5 146 aa11.87□□□□□ -0.51
CLN6-220ENST00000637450 C20orf203Q8NBC4 194 aa11.87□□□□□ -0.51
CLN6-220ENST00000637450 SMIM12Q96EX1 92 aa11.87□□□□□ -0.51
CLN6-220ENST00000637450 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.87□□□□□ -0.51
CLN6-220ENST00000637450 A0A1B0GUV1 79 aa11.86□□□□□ -0.51
CLN6-220ENST00000637450 F2Z2F3 143 aa11.86□□□□□ -0.51
CLN6-220ENST00000637450 GNG4P50150 75 aa11.86□□□□□ -0.51
CLN6-220ENST00000637450 NKX2-5P52952 324 aaPredicted RBP11.86□□□□□ -0.51
CLN6-220ENST00000637450 IGLV10-54A0A075B6I4 117 aa11.85□□□□□ -0.51
CLN6-220ENST00000637450 TRAV8-4A0A0B4J246 113 aa11.85□□□□□ -0.51
CLN6-220ENST00000637450 XKRY2A2RUG3 117 aa11.85□□□□□ -0.51
CLN6-220ENST00000637450 PANO1I0J062 215 aa11.85□□□□□ -0.51
CLN6-220ENST00000637450 P01737 135 aa11.85□□□□□ -0.51
CLN6-220ENST00000637450 RASL11AQ6T310 242 aa11.85□□□□□ -0.51
CLN6-220ENST00000637450 UBR4Q5T4S7 5183 aa11.84□□□□□ -0.51
CLN6-220ENST00000637450 IGLV4-60A0A075B6I1 120 aa11.84□□□□□ -0.51
CLN6-220ENST00000637450 TEX46H3BTG2 121 aa11.84□□□□□ -0.51
CLN6-220ENST00000637450 CNBPP62633 177 aaKnown RBP11.84□□□□□ -0.51
CLN6-220ENST00000637450 LYZL1Q6UWQ5 148 aa11.84□□□□□ -0.51
CLN6-220ENST00000637450 TMEM243Q9BU79 118 aa11.84□□□□□ -0.51
CLN6-220ENST00000637450 NIT2Q9NQR4 276 aa11.84□□□□□ -0.51
CLN6-220ENST00000637450 TRBV20OR9-2A0A075B6H5 130 aa11.83□□□□□ -0.52
CLN6-220ENST00000637450 PDE6DO43924 150 aa11.83□□□□□ -0.52
CLN6-220ENST00000637450 IFNA1P01562 189 aa11.83□□□□□ -0.52
CLN6-220ENST00000637450 TRGC1P0CF51 173 aa11.83□□□□□ -0.52
CLN6-220ENST00000637450 NTF3P20783 257 aa11.83□□□□□ -0.52
CLN6-220ENST00000637450 HNRNPA3P51991 378 aaKnown RBP11.83□□□□□ -0.52
CLN6-220ENST00000637450 MEF2BQ02080 365 aaPredicted RBP11.83□□□□□ -0.52
CLN6-220ENST00000637450 EIF5AL1Q6IS14 154 aaKnown RBP11.83□□□□□ -0.52
CLN6-220ENST00000637450 C9orf62Q8N4C0 152 aa11.83□□□□□ -0.52
CLN6-220ENST00000637450 PGLYRP4Q96LB8 373 aa11.83□□□□□ -0.52
CLN6-220ENST00000637450 GFRA4Q9GZZ7 299 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 300.3 ms