RNA–Protein interactions for RNA: ENST00000635273.1

SMARCA2-238, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5

Gene SMARCA2, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-238	ENST00000635273	GDF5OS	Q5U4N7	250 aa		3.41	□□□□□ -1.86
SMARCA2-238	ENST00000635273	EIF4E3	Q8N5X7	224 aa	Known RBP	3.41	□□□□□ -1.86
SMARCA2-238	ENST00000635273	OR4B1	Q8NGF8	309 aa		3.41	□□□□□ -1.86
SMARCA2-238	ENST00000635273	OR4X1	Q8NH49	305 aa		3.41	□□□□□ -1.86
SMARCA2-238	ENST00000635273	ACY3	Q96HD9	319 aa		3.41	□□□□□ -1.86
SMARCA2-238	ENST00000635273	ANAPC10	Q9UM13	185 aa		3.41	□□□□□ -1.86
SMARCA2-238	ENST00000635273	TRAV30	A0A087WSZ9	112 aa		3.4	□□□□□ -1.87
SMARCA2-238	ENST00000635273	CEBPZOS	A8MTT3	80 aa		3.4	□□□□□ -1.87
SMARCA2-238	ENST00000635273	FAM25A	B3EWG3	89 aa		3.4	□□□□□ -1.87
SMARCA2-238	ENST00000635273	FAM25C	B3EWG5	89 aa		3.4	□□□□□ -1.87
SMARCA2-238	ENST00000635273	FAM25G	B3EWG6	89 aa		3.4	□□□□□ -1.87
SMARCA2-238	ENST00000635273	CORT	O00230	105 aa		3.4	□□□□□ -1.87
SMARCA2-238	ENST00000635273	CD3D	P04234	171 aa		3.4	□□□□□ -1.87
SMARCA2-238	ENST00000635273	OR10J1	P30954	320 aa		3.4	□□□□□ -1.87
SMARCA2-238	ENST00000635273	LGALS9B	Q3B8N2	356 aa		3.4	□□□□□ -1.87
SMARCA2-238	ENST00000635273	SCGB2B2	Q4G0G5	96 aa		3.4	□□□□□ -1.87
SMARCA2-238	ENST00000635273	C1orf134	Q5TEV5	83 aa		3.4	□□□□□ -1.87
SMARCA2-238	ENST00000635273	ASB13	Q8WXK3	278 aa		3.4	□□□□□ -1.87
SMARCA2-238	ENST00000635273	HIST1H2BA	Q96A08	127 aa		3.4	□□□□□ -1.87
SMARCA2-238	ENST00000635273	PBDC1	Q9BVG4	233 aa		3.4	□□□□□ -1.87
SMARCA2-238	ENST00000635273	SLC35B3	Q9H1N7	401 aa		3.4	□□□□□ -1.87
SMARCA2-238	ENST00000635273		Q9H521	79 aa		3.4	□□□□□ -1.87
SMARCA2-238	ENST00000635273	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	3.4	□□□□□ -1.87
SMARCA2-238	ENST00000635273	COPZ2	Q9P299	210 aa		3.4	□□□□□ -1.87
SMARCA2-238	ENST00000635273	PKHD1	P08F94	4074 aa		3.4	□□□□□ -1.87
SMARCA2-238	ENST00000635273	RYR1	P21817	5038 aa		3.4	□□□□□ -1.87
SMARCA2-238	ENST00000635273	FAT2	Q9NYQ8	4349 aa		3.39	□□□□□ -1.87
SMARCA2-238	ENST00000635273	DNAH6	Q9C0G6	4158 aa		3.39	□□□□□ -1.87
SMARCA2-238	ENST00000635273	DNAH2	Q9P225	4427 aa		3.39	□□□□□ -1.87
SMARCA2-238	ENST00000635273	HECTD4	Q9Y4D8	3996 aa		3.39	□□□□□ -1.87
SMARCA2-238	ENST00000635273	PKD1	P98161	4303 aa		3.39	□□□□□ -1.87
SMARCA2-238	ENST00000635273	ATG12	O94817	140 aa		3.39	□□□□□ -1.87
SMARCA2-238	ENST00000635273	IGLC1	P0CG04	106 aa		3.39	□□□□□ -1.87
SMARCA2-238	ENST00000635273	RPL5	P46777	297 aa	Known RBP	3.39	□□□□□ -1.87
SMARCA2-238	ENST00000635273	SPCS3	P61009	180 aa		3.39	□□□□□ -1.87
SMARCA2-238	ENST00000635273	RAB14	P61106	215 aa		3.39	□□□□□ -1.87
SMARCA2-238	ENST00000635273	YPEL3	P61236	119 aa	Predicted RBP	3.39	□□□□□ -1.87
SMARCA2-238	ENST00000635273	NCS1	P62166	190 aa		3.39	□□□□□ -1.87
SMARCA2-238	ENST00000635273	RNASE10	Q5GAN6	216 aa	Known RBP	3.39	□□□□□ -1.87
SMARCA2-238	ENST00000635273	ZNF705A	Q6ZN79	300 aa	Predicted RBP	3.39	□□□□□ -1.87
SMARCA2-238	ENST00000635273	LINC00304	Q8N9R0	145 aa		3.39	□□□□□ -1.87
SMARCA2-238	ENST00000635273	OR13C8	Q8NGS7	320 aa		3.39	□□□□□ -1.87
SMARCA2-238	ENST00000635273	TERB2	Q8NHR7	220 aa		3.39	□□□□□ -1.87
SMARCA2-238	ENST00000635273	GPR146	Q96CH1	333 aa		3.39	□□□□□ -1.87
SMARCA2-238	ENST00000635273	PACRG	Q96M98	296 aa	Predicted RBP	3.39	□□□□□ -1.87
SMARCA2-238	ENST00000635273	TMEM189	A5PLL7	270 aa		3.38	□□□□□ -1.87
SMARCA2-238	ENST00000635273	SMIM9	A6NGZ8	99 aa		3.38	□□□□□ -1.87
SMARCA2-238	ENST00000635273	ZNF705F	A8MVS1	300 aa	Predicted RBP	3.38	□□□□□ -1.87
SMARCA2-238	ENST00000635273	CDS2	O95674	445 aa		3.38	□□□□□ -1.87
SMARCA2-238	ENST00000635273	ATP5G1	P05496	136 aa		3.38	□□□□□ -1.87
SMARCA2-238	ENST00000635273	ZNF705D	P0CH99	300 aa	Predicted RBP	3.38	□□□□□ -1.87
SMARCA2-238	ENST00000635273	ZNF705B	P0CI00	300 aa	Predicted RBP	3.38	□□□□□ -1.87
SMARCA2-238	ENST00000635273	DEFB130B	P0DP73	79 aa		3.38	□□□□□ -1.87
SMARCA2-238	ENST00000635273	DEFB130A	P0DP74	79 aa		3.38	□□□□□ -1.87
SMARCA2-238	ENST00000635273	PRB4	P10163	310 aa	Predicted RBP	3.38	□□□□□ -1.87
SMARCA2-238	ENST00000635273	SLC25A4	P12235	298 aa		3.38	□□□□□ -1.87
SMARCA2-238	ENST00000635273	HLA-DRB4	P13762	266 aa		3.38	□□□□□ -1.87
SMARCA2-238	ENST00000635273	HTN1	P15515	57 aa		3.38	□□□□□ -1.87
SMARCA2-238	ENST00000635273	PSG9	Q00887	426 aa		3.38	□□□□□ -1.87
SMARCA2-238	ENST00000635273	ZNF90	Q03938	601 aa		3.38	□□□□□ -1.87
SMARCA2-238	ENST00000635273	OR2F1	Q13607	317 aa		3.38	□□□□□ -1.87
SMARCA2-238	ENST00000635273	FAM78B	Q5VT40	261 aa		3.38	□□□□□ -1.87
SMARCA2-238	ENST00000635273	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.38	□□□□□ -1.87
SMARCA2-238	ENST00000635273	LHFPL1	Q86WI0	220 aa		3.38	□□□□□ -1.87
SMARCA2-238	ENST00000635273	C1orf158	Q8N1D5	194 aa		3.38	□□□□□ -1.87
SMARCA2-238	ENST00000635273	LHFPL5	Q8TAF8	219 aa		3.38	□□□□□ -1.87
SMARCA2-238	ENST00000635273	RTBDN	Q9BSG5	229 aa	Predicted RBP	3.38	□□□□□ -1.87
SMARCA2-238	ENST00000635273	TMEM222	Q9H0R3	208 aa		3.38	□□□□□ -1.87
SMARCA2-238	ENST00000635273	HLA-DRB4	X5D2U9	266 aa		3.38	□□□□□ -1.87
SMARCA2-238	ENST00000635273	DNAH17	Q9UFH2	4485 aa		3.38	□□□□□ -1.87
SMARCA2-238	ENST00000635273		A0A1B0GU33	70 aa		3.37	□□□□□ -1.87
SMARCA2-238	ENST00000635273		A0A1W2PNN7	141 aa		3.37	□□□□□ -1.87
SMARCA2-238	ENST00000635273	SNRPGP15	A8MWD9	76 aa		3.37	□□□□□ -1.87
SMARCA2-238	ENST00000635273	GSTZ1	O43708	216 aa	Predicted RBP	3.37	□□□□□ -1.87
SMARCA2-238	ENST00000635273	SSNA1	O43805	119 aa		3.37	□□□□□ -1.87
SMARCA2-238	ENST00000635273	CXCL2	P19875	107 aa		3.37	□□□□□ -1.87
SMARCA2-238	ENST00000635273	CXCL3	P19876	107 aa		3.37	□□□□□ -1.87
SMARCA2-238	ENST00000635273	CEBPG	P53567	150 aa		3.37	□□□□□ -1.87
SMARCA2-238	ENST00000635273	POLR2G	P62487	172 aa	Known RBP eCLIP	3.37	□□□□□ -1.87
SMARCA2-238	ENST00000635273	RRN3P1	Q2M238	152 aa		3.37	□□□□□ -1.87
SMARCA2-238	ENST00000635273	FOXI2	Q6ZQN5	318 aa		3.37	□□□□□ -1.87
SMARCA2-238	ENST00000635273	AKAP14	Q86UN6	197 aa		3.37	□□□□□ -1.87
SMARCA2-238	ENST00000635273	OR8I2	Q8N0Y5	310 aa		3.37	□□□□□ -1.87
SMARCA2-238	ENST00000635273	ZNF664	Q8N3J9	261 aa		3.37	□□□□□ -1.87
SMARCA2-238	ENST00000635273	IGF2BP2-AS1	Q96M15	143 aa		3.37	□□□□□ -1.87
SMARCA2-238	ENST00000635273	GNB1L	Q9BYB4	327 aa		3.37	□□□□□ -1.87
SMARCA2-238	ENST00000635273	MED28	Q9H204	178 aa		3.37	□□□□□ -1.87
SMARCA2-238	ENST00000635273	PAIP2B	Q9ULR5	123 aa	Known RBP	3.37	□□□□□ -1.87
SMARCA2-238	ENST00000635273	DYNC1H1	Q14204	4646 aa	Known RBP	3.36	□□□□□ -1.87
SMARCA2-238	ENST00000635273	TRAV12-2	A0A075B6T6	113 aa		3.36	□□□□□ -1.87
SMARCA2-238	ENST00000635273		A0A087WXM4	84 aa		3.36	□□□□□ -1.87
SMARCA2-238	ENST00000635273	IGKV2-24	A0A0C4DH68	120 aa		3.36	□□□□□ -1.87
SMARCA2-238	ENST00000635273		A0A0J9YX75	114 aa		3.36	□□□□□ -1.87
SMARCA2-238	ENST00000635273	NBDY	A0A0U1RRE5	68 aa		3.36	□□□□□ -1.87
SMARCA2-238	ENST00000635273		M0R2Z0	102 aa		3.36	□□□□□ -1.87
SMARCA2-238	ENST00000635273	SLC25A20	O43772	301 aa		3.36	□□□□□ -1.87
SMARCA2-238	ENST00000635273	TYMS	P04818	313 aa		3.36	□□□□□ -1.87
SMARCA2-238	ENST00000635273	SULT1A3	P0DMM9	295 aa		3.36	□□□□□ -1.87
SMARCA2-238	ENST00000635273	SULT1A4	P0DMN0	295 aa		3.36	□□□□□ -1.87
SMARCA2-238	ENST00000635273	S100A12	P80511	92 aa		3.36	□□□□□ -1.87

Retrieved 100 of 20,778 RNA–protein pairs in 1034.8 ms