RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 SCGB1D4Q6XE38 83 aa5.4□□□□□ -1.54
CTNNA1-244ENST00000627109 NEGR1Q7Z3B1 354 aa5.4□□□□□ -1.54
CTNNA1-244ENST00000627109 HIST1H4GQ99525 98 aa5.4□□□□□ -1.54
CTNNA1-244ENST00000627109 MRPL35Q9NZE8 188 aaKnown RBP5.4□□□□□ -1.54
CTNNA1-244ENST00000627109 SPCS1Q9Y6A9 102 aa5.4□□□□□ -1.54
CTNNA1-244ENST00000627109 FABP2P12104 132 aa5.4□□□□□ -1.55
CTNNA1-244ENST00000627109 RHPN1-AS1Q9BWJ2 59 aa5.4□□□□□ -1.55
CTNNA1-244ENST00000627109 TRAV21A0A0B4J279 112 aa5.39□□□□□ -1.55
CTNNA1-244ENST00000627109 SMIM13P0DJ93 91 aa5.39□□□□□ -1.55
CTNNA1-244ENST00000627109 XGP55808 180 aa5.39□□□□□ -1.55
CTNNA1-244ENST00000627109 MRPL55Q7Z7F7 128 aaKnown RBP5.39□□□□□ -1.55
CTNNA1-244ENST00000627109 KRTAP1-3Q8IUG1 177 aa5.39□□□□□ -1.55
CTNNA1-244ENST00000627109 CST9LQ9H4G1 147 aa5.39□□□□□ -1.55
CTNNA1-244ENST00000627109 TRAV12-1A0A0B4J245 112 aa5.39□□□□□ -1.55
CTNNA1-244ENST00000627109 SMIM9A6NGZ8 99 aa5.39□□□□□ -1.55
CTNNA1-244ENST00000627109 K7ERJ3 54 aa5.39□□□□□ -1.55
CTNNA1-244ENST00000627109 SFTA2Q6UW10 78 aa5.39□□□□□ -1.55
CTNNA1-244ENST00000627109 ODF3Q96PU9 254 aa5.39□□□□□ -1.55
CTNNA1-244ENST00000627109 KLLNB2CW77 178 aa5.39□□□□□ -1.55
CTNNA1-244ENST00000627109 LINC01619G3V211 115 aa5.39□□□□□ -1.55
CTNNA1-244ENST00000627109 GNRH2O43555 120 aa5.39□□□□□ -1.55
CTNNA1-244ENST00000627109 GATA3P23771 443 aa5.39□□□□□ -1.55
CTNNA1-244ENST00000627109 ANXA2RQ3ZCQ2 193 aa5.39□□□□□ -1.55
CTNNA1-244ENST00000627109 PLA2G2DQ9UNK4 145 aa5.39□□□□□ -1.55
CTNNA1-244ENST00000627109 CD7P09564 240 aa5.38□□□□□ -1.55
CTNNA1-244ENST00000627109 ZNF688P0C7X2 276 aa5.38□□□□□ -1.55
CTNNA1-244ENST00000627109 UFSP1Q6NVU6 142 aa5.38□□□□□ -1.55
CTNNA1-244ENST00000627109 C20orf78Q9BR46 151 aa5.38□□□□□ -1.55
CTNNA1-244ENST00000627109 KIF25-AS1Q9Y6Z4 181 aa5.38□□□□□ -1.55
CTNNA1-244ENST00000627109 TRAV12-3A0A0B4J271 114 aa5.38□□□□□ -1.55
CTNNA1-244ENST00000627109 OR11H12B2RN74 326 aa5.38□□□□□ -1.55
CTNNA1-244ENST00000627109 FSHBP01225 129 aa5.38□□□□□ -1.55
CTNNA1-244ENST00000627109 SRSF9Q13242 221 aaKnown RBP eCLIP5.38□□□□□ -1.55
CTNNA1-244ENST00000627109 OR11H1Q8NG94 326 aa5.38□□□□□ -1.55
CTNNA1-244ENST00000627109 OR11H2Q8NH07 326 aa5.38□□□□□ -1.55
CTNNA1-244ENST00000627109 RPL39LQ96EH5 51 aaKnown RBP5.38□□□□□ -1.55
CTNNA1-244ENST00000627109 CHAC1Q9BUX1 264 aa5.38□□□□□ -1.55
CTNNA1-244ENST00000627109 IGKV2D-26A0A0A0MRZ7 120 aa5.38□□□□□ -1.55
CTNNA1-244ENST00000627109 H3BRM9 83 aa5.38□□□□□ -1.55
CTNNA1-244ENST00000627109 PSMB8P28062 276 aa5.38□□□□□ -1.55
CTNNA1-244ENST00000627109 ZNF256Q9Y2P7 627 aaPredicted RBP5.38□□□□□ -1.55
CTNNA1-244ENST00000627109 LINC00315P59091 139 aa5.37□□□□□ -1.55
CTNNA1-244ENST00000627109 OCIAD2Q56VL3 154 aa5.37□□□□□ -1.55
CTNNA1-244ENST00000627109 ZNF418Q8TF45 676 aaPredicted RBP5.37□□□□□ -1.55
CTNNA1-244ENST00000627109 C1orf195Q5TG92 126 aa5.37□□□□□ -1.55
CTNNA1-244ENST00000627109 SAMD5Q5TGI4 173 aa5.37□□□□□ -1.55
CTNNA1-244ENST00000627109 DCANP1Q8TF63 244 aa5.37□□□□□ -1.55
CTNNA1-244ENST00000627109 IGHV4OR15-8A0A075B7B6 117 aa5.37□□□□□ -1.55
CTNNA1-244ENST00000627109 A0A087WW49 117 aa5.37□□□□□ -1.55
CTNNA1-244ENST00000627109 A0A0U1RQV1 116 aa5.37□□□□□ -1.55
CTNNA1-244ENST00000627109 C9orf118A6NHY6 69 aa5.37□□□□□ -1.55
CTNNA1-244ENST00000627109 RNASE3P12724 160 aaKnown RBP5.37□□□□□ -1.55
CTNNA1-244ENST00000627109 SUMO2P61956 95 aaKnown RBP5.37□□□□□ -1.55
CTNNA1-244ENST00000627109 RASL10AQ92737 203 aa5.37□□□□□ -1.55
CTNNA1-244ENST00000627109 TOMM6Q96B49 74 aa5.37□□□□□ -1.55
CTNNA1-244ENST00000627109 TRAV12-2A0A075B6T6 113 aa5.36□□□□□ -1.55
CTNNA1-244ENST00000627109 ZNF56Q15929 161 aa5.36□□□□□ -1.55
CTNNA1-244ENST00000627109 Q6ZS46 218 aa5.36□□□□□ -1.55
CTNNA1-244ENST00000627109 SMIM2Q9BVW6 85 aa5.36□□□□□ -1.55
CTNNA1-244ENST00000627109 DPH3P1Q9H4G8 78 aa5.36□□□□□ -1.55
CTNNA1-244ENST00000627109 MXRA5Q9NR99 2828 aa5.36□□□□□ -1.55
CTNNA1-244ENST00000627109 A0A087WX48 190 aa5.36□□□□□ -1.55
CTNNA1-244ENST00000627109 FXYD2P54710 66 aa5.36□□□□□ -1.55
CTNNA1-244ENST00000627109 DEFB112Q30KQ8 113 aa5.36□□□□□ -1.55
CTNNA1-244ENST00000627109 CYSLTR1Q9Y271 337 aa5.36□□□□□ -1.55
CTNNA1-244ENST00000627109 NACAE9PAV3 2078 aa5.36□□□□□ -1.55
CTNNA1-244ENST00000627109 TRBV25-1A0A075B6N4 114 aa5.36□□□□□ -1.55
CTNNA1-244ENST00000627109 TM2D2Q9BX73 214 aa5.36□□□□□ -1.55
CTNNA1-244ENST00000627109 DAZ1Q9NQZ3 744 aaKnown RBP5.36□□□□□ -1.55
CTNNA1-244ENST00000627109 A8MTW9 85 aa5.35□□□□□ -1.55
CTNNA1-244ENST00000627109 LINC01620Q4KN68 170 aa5.35□□□□□ -1.55
CTNNA1-244ENST00000627109 ORMDL2Q53FV1 153 aa5.35□□□□□ -1.55
CTNNA1-244ENST00000627109 TMEM170BQ5T4T1 132 aa5.35□□□□□ -1.55
CTNNA1-244ENST00000627109 C2orf66Q6UXQ4 117 aa5.35□□□□□ -1.55
CTNNA1-244ENST00000627109 PHLDA1Q8WV24 401 aaPredicted RBP5.35□□□□□ -1.55
CTNNA1-244ENST00000627109 GTSF1LQ9H1H1 148 aa5.35□□□□□ -1.55
CTNNA1-244ENST00000627109 PPDPFQ9H3Y8 114 aa5.35□□□□□ -1.55
CTNNA1-244ENST00000627109 FHL3Q13643 280 aa5.35□□□□□ -1.55
CTNNA1-244ENST00000627109 NEXN-AS1Q8NBZ9 246 aa5.35□□□□□ -1.55
CTNNA1-244ENST00000627109 LOC107984156A0A0G2JMH3 177 aa5.35□□□□□ -1.55
CTNNA1-244ENST00000627109 TNP2Q05952 138 aa5.35□□□□□ -1.55
CTNNA1-244ENST00000627109 ARL17AQ8IVW1 177 aa5.35□□□□□ -1.55
CTNNA1-244ENST00000627109 KIR2DL4Q99706 377 aa5.35□□□□□ -1.55
CTNNA1-244ENST00000627109 JPT2Q9H910 190 aa5.35□□□□□ -1.55
CTNNA1-244ENST00000627109 EDA2RQ9HAV5 297 aa5.35□□□□□ -1.55
CTNNA1-244ENST00000627109 FAM229AH3BQW9 127 aa5.34□□□□□ -1.55
CTNNA1-244ENST00000627109 H7C1H1 209 aa5.34□□□□□ -1.55
CTNNA1-244ENST00000627109 LGALS9O00182 355 aa5.34□□□□□ -1.55
CTNNA1-244ENST00000627109 HOXA3O43365 443 aaPredicted RBP5.34□□□□□ -1.55
CTNNA1-244ENST00000627109 PPP1R17O96001 155 aa5.34□□□□□ -1.55
CTNNA1-244ENST00000627109 TEX29Q8N6K0 151 aa5.34□□□□□ -1.55
CTNNA1-244ENST00000627109 LINC01549A6NIU2 74 aa5.34□□□□□ -1.55
CTNNA1-244ENST00000627109 ZNF815PA8K554 130 aa5.34□□□□□ -1.55
CTNNA1-244ENST00000627109 APOMO95445 188 aa5.34□□□□□ -1.55
CTNNA1-244ENST00000627109 IGHV4-59P01825 116 aa5.34□□□□□ -1.55
CTNNA1-244ENST00000627109 PLNP26678 52 aa5.34□□□□□ -1.55
CTNNA1-244ENST00000627109 SYNJ2BPP57105 145 aa5.34□□□□□ -1.55
CTNNA1-244ENST00000627109 SNRPD3P62318 126 aaKnown RBP5.34□□□□□ -1.55
CTNNA1-244ENST00000627109 C9orf85Q96MD7 179 aa5.34□□□□□ -1.55
CTNNA1-244ENST00000627109 IGHV3-73A0A0B4J1V6 119 aa5.34□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms