RNA–Protein interactions for RNA: ENST00000625891.2

NRXN1-223, Transcript of neurexin 1, human

TSL 4 BASIC

Gene NRXN1, Length 1,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-223	ENST00000625891	FER1L6-AS1	Q8NA97	138 aa		3.39	□□□□□ -1.87
NRXN1-223	ENST00000625891	ZNF439	Q8NDP4	499 aa		3.39	□□□□□ -1.87
NRXN1-223	ENST00000625891	OR4X2	Q8NGF9	303 aa		3.39	□□□□□ -1.87
NRXN1-223	ENST00000625891	MYOZ3	Q8TDC0	251 aa		3.39	□□□□□ -1.87
NRXN1-223	ENST00000625891	BORCS8	Q96FH0	119 aa		3.39	□□□□□ -1.87
NRXN1-223	ENST00000625891	YPEL2	Q96QA6	119 aa		3.39	□□□□□ -1.87
NRXN1-223	ENST00000625891	NABP2	Q9BQ15	211 aa		3.39	□□□□□ -1.87
NRXN1-223	ENST00000625891	PSMG3	Q9BT73	122 aa	Predicted RBP	3.39	□□□□□ -1.87
NRXN1-223	ENST00000625891	MAP1LC3B	Q9GZQ8	125 aa		3.39	□□□□□ -1.87
NRXN1-223	ENST00000625891	IDI2-AS1	Q9NZ38	188 aa		3.39	□□□□□ -1.87
NRXN1-223	ENST00000625891	IGKV2-28	A0A075B6P5	120 aa		3.38	□□□□□ -1.87
NRXN1-223	ENST00000625891	TRGV10	A0A0A0MS01	117 aa		3.38	□□□□□ -1.87
NRXN1-223	ENST00000625891	IGLC7	A0M8Q6	106 aa		3.38	□□□□□ -1.87
NRXN1-223	ENST00000625891		H7BYZ3	331 aa		3.38	□□□□□ -1.87
NRXN1-223	ENST00000625891		J3QR89	54 aa		3.38	□□□□□ -1.87
NRXN1-223	ENST00000625891	LGALS9	O00182	355 aa		3.38	□□□□□ -1.87
NRXN1-223	ENST00000625891	DEGS1	O15121	323 aa		3.38	□□□□□ -1.87
NRXN1-223	ENST00000625891	CXorf1	O96002	111 aa		3.38	□□□□□ -1.87
NRXN1-223	ENST00000625891	IFNA5	P01569	189 aa		3.38	□□□□□ -1.87
NRXN1-223	ENST00000625891	IGKV2D-28	P01615	120 aa		3.38	□□□□□ -1.87
NRXN1-223	ENST00000625891	PRH1	P02810	166 aa		3.38	□□□□□ -1.87
NRXN1-223	ENST00000625891	TYMS	P04818	313 aa		3.38	□□□□□ -1.87
NRXN1-223	ENST00000625891	CTSD	P07339	412 aa	Predicted RBP	3.38	□□□□□ -1.87
NRXN1-223	ENST00000625891	IGLC2	P0DOY2	106 aa		3.38	□□□□□ -1.87
NRXN1-223	ENST00000625891	IGLC3	P0DOY3	106 aa		3.38	□□□□□ -1.87
NRXN1-223	ENST00000625891	NTF3	P20783	257 aa		3.38	□□□□□ -1.87
NRXN1-223	ENST00000625891	PSMB8	P28062	276 aa		3.38	□□□□□ -1.87
NRXN1-223	ENST00000625891	EBI3	Q14213	229 aa		3.38	□□□□□ -1.87
NRXN1-223	ENST00000625891	SPATA45	Q537H7	98 aa		3.38	□□□□□ -1.87
NRXN1-223	ENST00000625891	SPIN3	Q5JUX0	258 aa		3.38	□□□□□ -1.87
NRXN1-223	ENST00000625891	ZNF709	Q8N972	641 aa		3.38	□□□□□ -1.87
NRXN1-223	ENST00000625891	OR51T1	Q8NGJ9	327 aa		3.38	□□□□□ -1.87
NRXN1-223	ENST00000625891	C2orf50	Q96LR7	162 aa		3.38	□□□□□ -1.87
NRXN1-223	ENST00000625891	LINC00477	Q96M19	166 aa		3.38	□□□□□ -1.87
NRXN1-223	ENST00000625891	FAM103A1	Q9BTL3	118 aa	Known RBP	3.38	□□□□□ -1.87
NRXN1-223	ENST00000625891	WFDC10A	Q9H1F0	79 aa		3.38	□□□□□ -1.87
NRXN1-223	ENST00000625891	BANF2	Q9H503	90 aa		3.38	□□□□□ -1.87
NRXN1-223	ENST00000625891	SND1-IT1	Q9HBX3	110 aa		3.38	□□□□□ -1.87
NRXN1-223	ENST00000625891	TAS2R4	Q9NYW5	299 aa		3.38	□□□□□ -1.87
NRXN1-223	ENST00000625891	HSPG2	P98160	4391 aa		3.38	□□□□□ -1.87
NRXN1-223	ENST00000625891	C3orf84	H3BNL1	204 aa		3.37	□□□□□ -1.87
NRXN1-223	ENST00000625891		H3BP45	60 aa		3.37	□□□□□ -1.87
NRXN1-223	ENST00000625891		J3QLW9	94 aa		3.37	□□□□□ -1.87
NRXN1-223	ENST00000625891	HYPM	O75409	117 aa		3.37	□□□□□ -1.87
NRXN1-223	ENST00000625891	CDS2	O95674	445 aa		3.37	□□□□□ -1.87
NRXN1-223	ENST00000625891	CD3D	P04234	171 aa		3.37	□□□□□ -1.87
NRXN1-223	ENST00000625891	PFN1	P07737	140 aa	Known RBP	3.37	□□□□□ -1.87
NRXN1-223	ENST00000625891	IGLC1	P0CG04	106 aa		3.37	□□□□□ -1.87
NRXN1-223	ENST00000625891	PTHLH	P12272	177 aa		3.37	□□□□□ -1.87
NRXN1-223	ENST00000625891	BLVRB	P30043	206 aa	Predicted RBP	3.37	□□□□□ -1.87
NRXN1-223	ENST00000625891	RPL12	P30050	165 aa	Known RBP	3.37	□□□□□ -1.87
NRXN1-223	ENST00000625891	HINT1	P49773	126 aa	Predicted RBP	3.37	□□□□□ -1.87
NRXN1-223	ENST00000625891	TMEM267	Q0VDI3	215 aa	Predicted RBP	3.37	□□□□□ -1.87
NRXN1-223	ENST00000625891	KISS1	Q15726	138 aa		3.37	□□□□□ -1.87
NRXN1-223	ENST00000625891	PMCHL1	Q16048	86 aa		3.37	□□□□□ -1.87
NRXN1-223	ENST00000625891	TDRG1	Q3Y452	100 aa		3.37	□□□□□ -1.87
NRXN1-223	ENST00000625891	DPPA3	Q6W0C5	159 aa		3.37	□□□□□ -1.87
NRXN1-223	ENST00000625891	NEGR1	Q7Z3B1	354 aa		3.37	□□□□□ -1.87
NRXN1-223	ENST00000625891	OR8I2	Q8N0Y5	310 aa		3.37	□□□□□ -1.87
NRXN1-223	ENST00000625891	C5orf17	Q8NAS9	161 aa		3.37	□□□□□ -1.87
NRXN1-223	ENST00000625891	CMTM2	Q8TAZ6	248 aa		3.37	□□□□□ -1.87
NRXN1-223	ENST00000625891	SMIM19	Q96E16	107 aa		3.37	□□□□□ -1.87
NRXN1-223	ENST00000625891	LINC00574	Q9H8X3	128 aa		3.37	□□□□□ -1.87
NRXN1-223	ENST00000625891	RBM12B-AS1	Q9P1G2	102 aa		3.37	□□□□□ -1.87
NRXN1-223	ENST00000625891	JPT1	Q9UK76	154 aa		3.37	□□□□□ -1.87
NRXN1-223	ENST00000625891	TRAPPC2L	Q9UL33	140 aa		3.37	□□□□□ -1.87
NRXN1-223	ENST00000625891	APOB	P04114	4563 aa	Known RBP	3.36	□□□□□ -1.87
NRXN1-223	ENST00000625891	IGSF23	A1L1A6	192 aa		3.36	□□□□□ -1.87
NRXN1-223	ENST00000625891	CYB5A	P00167	134 aa		3.36	□□□□□ -1.87
NRXN1-223	ENST00000625891	REG1A	P05451	166 aa		3.36	□□□□□ -1.87
NRXN1-223	ENST00000625891	PPP1CC	P36873	323 aa	Known RBP	3.36	□□□□□ -1.87
NRXN1-223	ENST00000625891	TAS2R30	P59541	319 aa		3.36	□□□□□ -1.87
NRXN1-223	ENST00000625891	RPS11	P62280	158 aa	Known RBP eCLIP	3.36	□□□□□ -1.87
NRXN1-223	ENST00000625891	RUNX1	Q01196	453 aa		3.36	□□□□□ -1.87
NRXN1-223	ENST00000625891	HSD52	Q0P140	79 aa		3.36	□□□□□ -1.87
NRXN1-223	ENST00000625891	PPP1R1A	Q13522	171 aa		3.36	□□□□□ -1.87
NRXN1-223	ENST00000625891	EIF4EBP1	Q13541	118 aa	Predicted RBP	3.36	□□□□□ -1.87
NRXN1-223	ENST00000625891	IAH1	Q2TAA2	248 aa	Predicted RBP	3.36	□□□□□ -1.87
NRXN1-223	ENST00000625891	SP6	Q3SY56	376 aa		3.36	□□□□□ -1.87
NRXN1-223	ENST00000625891	AMMECR1L	Q6DCA0	310 aa		3.36	□□□□□ -1.87
NRXN1-223	ENST00000625891	MRPL54	Q6P161	138 aa	Known RBP	3.36	□□□□□ -1.87
NRXN1-223	ENST00000625891	SGPP2	Q8IWX5	399 aa		3.36	□□□□□ -1.87
NRXN1-223	ENST00000625891	DEFB125	Q8N687	156 aa		3.36	□□□□□ -1.87
NRXN1-223	ENST00000625891	MIR7-3HG	Q8N6C7	128 aa		3.36	□□□□□ -1.87
NRXN1-223	ENST00000625891	ST20-AS1	Q8NBB2	130 aa		3.36	□□□□□ -1.87
NRXN1-223	ENST00000625891	OR5A1	Q8NGJ0	315 aa		3.36	□□□□□ -1.87
NRXN1-223	ENST00000625891	FAM213B	Q8TBF2	198 aa		3.36	□□□□□ -1.87
NRXN1-223	ENST00000625891	C4orf3	Q8WVX3	66 aa		3.36	□□□□□ -1.87
NRXN1-223	ENST00000625891	TM2D3	Q9BRN9	247 aa		3.36	□□□□□ -1.87
NRXN1-223	ENST00000625891	FBXL15	Q9H469	300 aa		3.36	□□□□□ -1.87
NRXN1-223	ENST00000625891	MRPL16	Q9NX20	251 aa	Known RBP	3.36	□□□□□ -1.87
NRXN1-223	ENST00000625891		S4R3C0	116 aa		3.36	□□□□□ -1.87
NRXN1-223	ENST00000625891	DNAH5	Q8TE73	4624 aa		3.35	□□□□□ -1.87
NRXN1-223	ENST00000625891	LRP1B	Q9NZR2	4599 aa		3.35	□□□□□ -1.87
NRXN1-223	ENST00000625891	TRAV1-1	A0A0B4J248	108 aa		3.35	□□□□□ -1.87
NRXN1-223	ENST00000625891	TMEM189	A5PLL7	270 aa		3.35	□□□□□ -1.87
NRXN1-223	ENST00000625891	SDCBP	O00560	298 aa	Predicted RBP	3.35	□□□□□ -1.87
NRXN1-223	ENST00000625891	OVOL1	O14753	267 aa		3.35	□□□□□ -1.87
NRXN1-223	ENST00000625891	TAX1BP3	O14907	124 aa		3.35	□□□□□ -1.87
NRXN1-223	ENST00000625891	SFT2D2	O95562	160 aa		3.35	□□□□□ -1.87

Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms