RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 FABP9Q0Z7S8 132 aa11.56□□□□□ -0.56
CCNA1-203ENST00000625767 GAGE1Q13065 139 aa11.56□□□□□ -0.56
CCNA1-203ENST00000625767 GAGE4Q13068 117 aa11.56□□□□□ -0.56
CCNA1-203ENST00000625767 GAGE5Q13069 117 aa11.56□□□□□ -0.56
CCNA1-203ENST00000625767 RHOHQ15669 191 aa11.56□□□□□ -0.56
CCNA1-203ENST00000625767 GAGE13Q4V321 117 aa11.56□□□□□ -0.56
CCNA1-203ENST00000625767 CEMP1Q6PRD7 247 aaPredicted RBP11.56□□□□□ -0.56
CCNA1-203ENST00000625767 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.56□□□□□ -0.56
CCNA1-203ENST00000625767 DEFB104AQ8WTQ1 72 aa11.56□□□□□ -0.56
CCNA1-203ENST00000625767 TRAPPC1Q9Y5R8 145 aa11.56□□□□□ -0.56
CCNA1-203ENST00000625767 NRACQ8N912 160 aa11.55□□□□□ -0.56
CCNA1-203ENST00000625767 RAB5AP20339 215 aa11.55□□□□□ -0.56
CCNA1-203ENST00000625767 CKS2P33552 79 aa11.55□□□□□ -0.56
CCNA1-203ENST00000625767 ZNRF2Q8NHG8 242 aa11.55□□□□□ -0.56
CCNA1-203ENST00000625767 NUDT3O95989 172 aa11.54□□□□□ -0.56
CCNA1-203ENST00000625767 NPYP01303 97 aa11.54□□□□□ -0.56
CCNA1-203ENST00000625767 MRAP2Q96G30 205 aa11.54□□□□□ -0.56
CCNA1-203ENST00000625767 PRADC1Q9BSG0 188 aa11.54□□□□□ -0.56
CCNA1-203ENST00000625767 MT-ND6P03923 174 aa11.53□□□□□ -0.56
CCNA1-203ENST00000625767 NEGR1Q7Z3B1 354 aa11.53□□□□□ -0.56
CCNA1-203ENST00000625767 NIT2Q9NQR4 276 aa11.53□□□□□ -0.56
CCNA1-203ENST00000625767 DNAH1Q9P2D7 4330 aa11.53□□□□□ -0.56
CCNA1-203ENST00000625767 IGHV3-38A0A0C4DH36 116 aa11.52□□□□□ -0.56
CCNA1-203ENST00000625767 TRGC2P03986 189 aa11.52□□□□□ -0.56
CCNA1-203ENST00000625767 LINC00694P0DN24 101 aa11.52□□□□□ -0.56
CCNA1-203ENST00000625767 COX19Q49B96 90 aa11.52□□□□□ -0.56
CCNA1-203ENST00000625767 OR10J3Q5JRS4 329 aa11.52□□□□□ -0.56
CCNA1-203ENST00000625767 PRELID3AQ96N28 172 aa11.52□□□□□ -0.56
CCNA1-203ENST00000625767 TRBV10-1A0A0K0K1A3 114 aa11.52□□□□□ -0.57
CCNA1-203ENST00000625767 NUPR2A6NF83 97 aa11.52□□□□□ -0.57
CCNA1-203ENST00000625767 H7C1H1 209 aa11.52□□□□□ -0.57
CCNA1-203ENST00000625767 TNFRSF6BO95407 300 aa11.52□□□□□ -0.57
CCNA1-203ENST00000625767 ORMDL3Q8N138 153 aa11.52□□□□□ -0.57
CCNA1-203ENST00000625767 TRBV7-3A0A075B6L6 115 aa11.51□□□□□ -0.57
CCNA1-203ENST00000625767 ICOSQ9Y6W8 199 aa11.51□□□□□ -0.57
CCNA1-203ENST00000625767 H3BNG1 76 aa11.5□□□□□ -0.57
CCNA1-203ENST00000625767 PHOX2AO14813 284 aa11.5□□□□□ -0.57
CCNA1-203ENST00000625767 SRIP30626 198 aa11.5□□□□□ -0.57
CCNA1-203ENST00000625767 UBE2D3P61077 147 aa11.5□□□□□ -0.57
CCNA1-203ENST00000625767 UBE2D2P62837 147 aa11.5□□□□□ -0.57
CCNA1-203ENST00000625767 RPL36AP83881 106 aaKnown RBP11.5□□□□□ -0.57
CCNA1-203ENST00000625767 RPL36ALQ969Q0 106 aaKnown RBP11.5□□□□□ -0.57
CCNA1-203ENST00000625767 ALKBH7Q9BT30 221 aaPredicted RBP11.5□□□□□ -0.57
CCNA1-203ENST00000625767 APLNQ9ULZ1 77 aa11.5□□□□□ -0.57
CCNA1-203ENST00000625767 VPS13DQ5THJ4 4388 aa11.5□□□□□ -0.57
CCNA1-203ENST00000625767 TNFRSF18Q9Y5U5 241 aa11.49□□□□□ -0.57
CCNA1-203ENST00000625767 SDHAF1A6NFY7 115 aa11.49□□□□□ -0.57
CCNA1-203ENST00000625767 MRPL23Q16540 153 aaKnown RBP11.49□□□□□ -0.57
CCNA1-203ENST00000625767 TRBV6-5A0A0K0K1A5 114 aa11.48□□□□□ -0.57
CCNA1-203ENST00000625767 LOC389332A0A1B0GUA5 103 aa11.48□□□□□ -0.57
CCNA1-203ENST00000625767 PPBPP02775 128 aa11.48□□□□□ -0.57
CCNA1-203ENST00000625767 CASC10Q5T4H9 136 aa11.48□□□□□ -0.57
CCNA1-203ENST00000625767 DNAJC30Q96LL9 226 aa11.48□□□□□ -0.57
CCNA1-203ENST00000625767 TMEM70Q9BUB7 260 aa11.48□□□□□ -0.57
CCNA1-203ENST00000625767 ST20Q9HBF5 79 aa11.48□□□□□ -0.57
CCNA1-203ENST00000625767 KLK5Q9Y337 293 aaPredicted RBP11.48□□□□□ -0.57
CCNA1-203ENST00000625767 SUMO2P61956 95 aaKnown RBP11.47□□□□□ -0.57
CCNA1-203ENST00000625767 IQCJQ1A5X6 159 aa11.47□□□□□ -0.57
CCNA1-203ENST00000625767 ATP6V0E2Q8NHE4 81 aa11.47□□□□□ -0.57
CCNA1-203ENST00000625767 POLR2KP53803 58 aaKnown RBP11.46□□□□□ -0.57
CCNA1-203ENST00000625767 C15orf53Q8NAA6 179 aa11.46□□□□□ -0.57
CCNA1-203ENST00000625767 ESRGQ1W209 222 aa11.46□□□□□ -0.58
CCNA1-203ENST00000625767 KMT2AQ03164 3969 aa11.45□□□□□ -0.58
CCNA1-203ENST00000625767 NTM-AS1Q6ZSK4 140 aa11.45□□□□□ -0.58
CCNA1-203ENST00000625767 LYPD5Q6UWN5 251 aa11.44□□□□□ -0.58
CCNA1-203ENST00000625767 C18orf32Q8TCD1 76 aa11.44□□□□□ -0.58
CCNA1-203ENST00000625767 SMIM2Q9BVW6 85 aa11.44□□□□□ -0.58
CCNA1-203ENST00000625767 IGLV2-18A0A075B6J9 118 aa11.43□□□□□ -0.58
CCNA1-203ENST00000625767 C20orf78Q9BR46 151 aa11.43□□□□□ -0.58
CCNA1-203ENST00000625767 ALMS1Q8TCU4 4167 aa11.43□□□□□ -0.58
CCNA1-203ENST00000625767 TRBV27A0A0K0K1C4 114 aa11.43□□□□□ -0.58
CCNA1-203ENST00000625767 C3orf84H3BNL1 204 aa11.43□□□□□ -0.58
CCNA1-203ENST00000625767 PPP1R17O96001 155 aa11.43□□□□□ -0.58
CCNA1-203ENST00000625767 IFI27P40305 119 aaPredicted RBP11.43□□□□□ -0.58
CCNA1-203ENST00000625767 GTSF1LQ9H1H1 148 aa11.43□□□□□ -0.58
CCNA1-203ENST00000625767 MAP1LC3AQ9H492 121 aa11.43□□□□□ -0.58
CCNA1-203ENST00000625767 LAMTOR2Q9Y2Q5 125 aa11.43□□□□□ -0.58
CCNA1-203ENST00000625767 TCAPO15273 167 aa11.42□□□□□ -0.58
CCNA1-203ENST00000625767 TSHBP01222 138 aa11.42□□□□□ -0.58
CCNA1-203ENST00000625767 PMCHP20382 165 aa11.42□□□□□ -0.58
CCNA1-203ENST00000625767 DAZ4Q86SG3 579 aaKnown RBP11.42□□□□□ -0.58
CCNA1-203ENST00000625767 URB1-AS1Q96HZ7 61 aa11.42□□□□□ -0.58
CCNA1-203ENST00000625767 DAZ3Q9NR90 486 aaKnown RBP11.42□□□□□ -0.58
CCNA1-203ENST00000625767 I3L3M4 83 aa11.41□□□□□ -0.58
CCNA1-203ENST00000625767 LINC00588Q9Y4M8 146 aa11.41□□□□□ -0.58
CCNA1-203ENST00000625767 PRSS47A8MTI9 375 aa11.4□□□□□ -0.58
CCNA1-203ENST00000625767 VCYO14598 125 aa11.4□□□□□ -0.59
CCNA1-203ENST00000625767 HIST1H2BKO60814 126 aa11.4□□□□□ -0.59
CCNA1-203ENST00000625767 HIST1H2BJP06899 126 aa11.4□□□□□ -0.59
CCNA1-203ENST00000625767 HIST1H2BOP23527 126 aa11.4□□□□□ -0.59
CCNA1-203ENST00000625767 HIST1H2BBP33778 126 aa11.4□□□□□ -0.59
CCNA1-203ENST00000625767 HIST1H2BDP58876 126 aa11.4□□□□□ -0.59
CCNA1-203ENST00000625767 HIST1H2BCP62807 126 aa11.4□□□□□ -0.59
CCNA1-203ENST00000625767 HIST2H2BEQ16778 126 aa11.4□□□□□ -0.59
CCNA1-203ENST00000625767 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.4□□□□□ -0.59
CCNA1-203ENST00000625767 HIST1H2BHQ93079 126 aa11.4□□□□□ -0.59
CCNA1-203ENST00000625767 HIST1H2BNQ99877 126 aa11.4□□□□□ -0.59
CCNA1-203ENST00000625767 HIST1H2BMQ99879 126 aa11.4□□□□□ -0.59
CCNA1-203ENST00000625767 TRBV6-8A0A0A6YYG3 113 aa11.39□□□□□ -0.59
CCNA1-203ENST00000625767 RPL32P62910 135 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms