RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 LCE2AQ5TA79 106 aaPredicted RBP8.86□□□□□ -0.99
SNX1-214ENST00000625244 SLC25A29Q8N8R3 303 aa8.86□□□□□ -0.99
SNX1-214ENST00000625244 SMIM7Q9BQ49 75 aa8.86□□□□□ -0.99
SNX1-214ENST00000625244 A0A0J9YXV3 536 aa8.85□□□□□ -0.99
SNX1-214ENST00000625244 XKRY2A2RUG3 117 aa8.85□□□□□ -0.99
SNX1-214ENST00000625244 ZNF727A8MUV8 499 aa8.85□□□□□ -0.99
SNX1-214ENST00000625244 CRIP1P50238 77 aa8.85□□□□□ -0.99
SNX1-214ENST00000625244 LINC01559Q495D7 138 aa8.85□□□□□ -0.99
SNX1-214ENST00000625244 CLLU1Q5K131 121 aa8.85□□□□□ -0.99
SNX1-214ENST00000625244 RMI2Q96E14 147 aa8.85□□□□□ -0.99
SNX1-214ENST00000625244 C11orf21Q9P2W6 132 aa8.85□□□□□ -0.99
SNX1-214ENST00000625244 TMSB15BA0A087X1C1 80 aa8.84□□□□□ -0.99
SNX1-214ENST00000625244 IGKV3D-20A0A0C4DH25 116 aa8.84□□□□□ -0.99
SNX1-214ENST00000625244 KRBOX1C9JBD0 128 aa8.84□□□□□ -0.99
SNX1-214ENST00000625244 P01737 135 aa8.84□□□□□ -0.99
SNX1-214ENST00000625244 SRP19P09132 144 aaKnown RBP8.84□□□□□ -0.99
SNX1-214ENST00000625244 RPS20P60866 119 aaKnown RBP8.84□□□□□ -0.99
SNX1-214ENST00000625244 FAM74A3Q4VXF1 159 aa8.84□□□□□ -0.99
SNX1-214ENST00000625244 TRBV20OR9-2A0A075B6H5 130 aa8.83□□□□□ -1
SNX1-214ENST00000625244 IL36BQ9NZH7 164 aa8.83□□□□□ -1
SNX1-214ENST00000625244 PHLDA3Q9Y5J5 127 aa8.83□□□□□ -1
SNX1-214ENST00000625244 GRIFINA4D1Z8 144 aa8.82□□□□□ -1
SNX1-214ENST00000625244 PGPEP1LA6NFU8 196 aa8.82□□□□□ -1
SNX1-214ENST00000625244 H3BVH4 76 aa8.82□□□□□ -1
SNX1-214ENST00000625244 CXCL1P09341 107 aa8.82□□□□□ -1
SNX1-214ENST00000625244 IFITM2Q01629 132 aa8.82□□□□□ -1
SNX1-214ENST00000625244 ZNF876PQ49A33 203 aa8.82□□□□□ -1
SNX1-214ENST00000625244 OR2D3Q8NGH3 330 aa8.82□□□□□ -1
SNX1-214ENST00000625244 C9orf85Q96MD7 179 aa8.82□□□□□ -1
SNX1-214ENST00000625244 A0A0U1RQV1 116 aa8.81□□□□□ -1
SNX1-214ENST00000625244 ARMS2P0C7Q2 107 aa8.81□□□□□ -1
SNX1-214ENST00000625244 RNASE3P12724 160 aaKnown RBP8.81□□□□□ -1
SNX1-214ENST00000625244 C14orf177Q52M58 125 aa8.81□□□□□ -1
SNX1-214ENST00000625244 DNLZQ5SXM8 178 aa8.81□□□□□ -1
SNX1-214ENST00000625244 OCC1Q8TAD7 63 aa8.81□□□□□ -1
SNX1-214ENST00000625244 PRADC1Q9BSG0 188 aa8.81□□□□□ -1
SNX1-214ENST00000625244 RPL19P84098 196 aaKnown RBP8.8□□□□□ -1
SNX1-214ENST00000625244 RHOHQ15669 191 aa8.8□□□□□ -1
SNX1-214ENST00000625244 TMEM241Q24JQ0 296 aa8.8□□□□□ -1
SNX1-214ENST00000625244 ZFP82Q8N141 532 aa8.8□□□□□ -1
SNX1-214ENST00000625244 PTH2Q96A98 100 aa8.8□□□□□ -1
SNX1-214ENST00000625244 TRBV6-4A0A1B0GX49 114 aa8.79□□□□□ -1
SNX1-214ENST00000625244 C19orf71A6NCJ1 209 aa8.79□□□□□ -1
SNX1-214ENST00000625244 A8MWV9 139 aa8.79□□□□□ -1
SNX1-214ENST00000625244 CIDEAO60543 219 aa8.79□□□□□ -1
SNX1-214ENST00000625244 SRSF3P84103 164 aaKnown RBP8.79□□□□□ -1
SNX1-214ENST00000625244 PIK3CD-AS1Q5SR53 167 aa8.79□□□□□ -1
SNX1-214ENST00000625244 SPANXN1Q5VSR9 72 aa8.79□□□□□ -1
SNX1-214ENST00000625244 SDIM1Q6ZPB5 146 aa8.79□□□□□ -1
SNX1-214ENST00000625244 C9orf163Q8N9P6 203 aa8.79□□□□□ -1
SNX1-214ENST00000625244 TPPP3Q9BW30 176 aa8.79□□□□□ -1
SNX1-214ENST00000625244 RPP21Q9H633 154 aaKnown RBP8.79□□□□□ -1
SNX1-214ENST00000625244 NAT8Q9UHE5 227 aa8.79□□□□□ -1
SNX1-214ENST00000625244 KLK12Q9UKR0 248 aa8.79□□□□□ -1
SNX1-214ENST00000625244 IGHV3-73A0A0B4J1V6 119 aa8.78□□□□□ -1
SNX1-214ENST00000625244 K7EN84 100 aa8.78□□□□□ -1
SNX1-214ENST00000625244 M0R381 172 aa8.78□□□□□ -1
SNX1-214ENST00000625244 GATCO43716 136 aaKnown RBP8.78□□□□□ -1
SNX1-214ENST00000625244 WDR73Q6P4I2 378 aa8.78□□□□□ -1
SNX1-214ENST00000625244 ATRAIDQ6UW56 229 aa8.78□□□□□ -1
SNX1-214ENST00000625244 LINC01551Q86U37 167 aa8.78□□□□□ -1
SNX1-214ENST00000625244 C15orf54Q8N8G6 183 aa8.78□□□□□ -1
SNX1-214ENST00000625244 FER1L6-AS1Q8NA97 138 aa8.78□□□□□ -1
SNX1-214ENST00000625244 NUDT10Q8NFP7 164 aa8.78□□□□□ -1
SNX1-214ENST00000625244 UBE2WQ96B02 151 aa8.78□□□□□ -1
SNX1-214ENST00000625244 NUDT11Q96G61 164 aa8.78□□□□□ -1
SNX1-214ENST00000625244 RNASE7Q9H1E1 156 aaKnown RBP8.78□□□□□ -1
SNX1-214ENST00000625244 C9JQL5 133 aa8.77□□□□□ -1.01
SNX1-214ENST00000625244 PHOX2AO14813 284 aa8.77□□□□□ -1.01
SNX1-214ENST00000625244 PRSS1P07477 247 aa8.77□□□□□ -1.01
SNX1-214ENST00000625244 OR5AL1P0C617 328 aa8.77□□□□□ -1.01
SNX1-214ENST00000625244 CIRBPQ14011 172 aaKnown RBP8.77□□□□□ -1.01
SNX1-214ENST00000625244 ADIRFQ15847 76 aa8.77□□□□□ -1.01
SNX1-214ENST00000625244 UQCC3Q6UW78 93 aa8.77□□□□□ -1.01
SNX1-214ENST00000625244 FAM231DQ6ZW35 169 aa8.77□□□□□ -1.01
SNX1-214ENST00000625244 A8MWL6 223 aa8.76□□□□□ -1.01
SNX1-214ENST00000625244 F2Z2F3 143 aa8.76□□□□□ -1.01
SNX1-214ENST00000625244 RHODO00212 210 aa8.76□□□□□ -1.01
SNX1-214ENST00000625244 CFAP126Q5VTH2 177 aa8.76□□□□□ -1.01
SNX1-214ENST00000625244 DGAT2L7PQ6IED9 249 aa8.76□□□□□ -1.01
SNX1-214ENST00000625244 NIT1Q86X76 327 aa8.76□□□□□ -1.01
SNX1-214ENST00000625244 KIF25-AS1Q9Y6Z4 181 aa8.76□□□□□ -1.01
SNX1-214ENST00000625244 USP17L23D6RBM5 183 aa8.75□□□□□ -1.01
SNX1-214ENST00000625244 SNAI2O43623 268 aa8.75□□□□□ -1.01
SNX1-214ENST00000625244 GZMBP10144 247 aa8.75□□□□□ -1.01
SNX1-214ENST00000625244 CACNG7P62955 275 aa8.75□□□□□ -1.01
SNX1-214ENST00000625244 CT83Q5H943 113 aa8.75□□□□□ -1.01
SNX1-214ENST00000625244 COMMD7Q86VX2 200 aa8.75□□□□□ -1.01
SNX1-214ENST00000625244 BORCS7Q96B45 105 aa8.75□□□□□ -1.01
SNX1-214ENST00000625244 OSTCQ9NRP0 149 aa8.75□□□□□ -1.01
SNX1-214ENST00000625244 A0A087WYN8 130 aa8.74□□□□□ -1.01
SNX1-214ENST00000625244 SMIM17P0DL12 118 aa8.74□□□□□ -1.01
SNX1-214ENST00000625244 LINC00694P0DN24 101 aa8.74□□□□□ -1.01
SNX1-214ENST00000625244 RPL23P62829 140 aaKnown RBP8.74□□□□□ -1.01
SNX1-214ENST00000625244 FAM74A4Q5TZK3 123 aa8.74□□□□□ -1.01
SNX1-214ENST00000625244 OR10AG1Q8NH19 301 aa8.74□□□□□ -1.01
SNX1-214ENST00000625244 ISOC2Q96AB3 205 aa8.74□□□□□ -1.01
SNX1-214ENST00000625244 SFRP2Q96HF1 295 aa8.74□□□□□ -1.01
SNX1-214ENST00000625244 AP1S3Q96PC3 154 aa8.74□□□□□ -1.01
SNX1-214ENST00000625244 SSBP4Q9BWG4 385 aaPredicted RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms