RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 RPL11P62913 178 aaKnown RBP6.56□□□□□ -1.36
VCL-207ENST00000624354 UNQ9165/PRO28630Q6UXU0 137 aa6.56□□□□□ -1.36
VCL-207ENST00000624354 NDUFA4O00483 81 aa6.56□□□□□ -1.36
VCL-207ENST00000624354 ID1P41134 155 aa6.56□□□□□ -1.36
VCL-207ENST00000624354 GPHB5Q86YW7 130 aa6.56□□□□□ -1.36
VCL-207ENST00000624354 BPESC1Q9GZL8 116 aa6.56□□□□□ -1.36
VCL-207ENST00000624354 VPREB3Q9UKI3 123 aa6.56□□□□□ -1.36
VCL-207ENST00000624354 A0A1W2PPR1 153 aa6.56□□□□□ -1.36
VCL-207ENST00000624354 C19orf84I3L1E1 186 aa6.56□□□□□ -1.36
VCL-207ENST00000624354 LMO4P61968 165 aa6.56□□□□□ -1.36
VCL-207ENST00000624354 C10orf126Q8N4M7 172 aa6.56□□□□□ -1.36
VCL-207ENST00000624354 C15orf53Q8NAA6 179 aa6.56□□□□□ -1.36
VCL-207ENST00000624354 UBTD1Q9HAC8 227 aa6.56□□□□□ -1.36
VCL-207ENST00000624354 SETXQ7Z333 2677 aaKnown RBP6.56□□□□□ -1.36
VCL-207ENST00000624354 TRAV8-4A0A0B4J246 113 aa6.55□□□□□ -1.36
VCL-207ENST00000624354 DEFB1P60022 68 aa6.55□□□□□ -1.36
VCL-207ENST00000624354 FBN2P35556 2912 aa6.55□□□□□ -1.36
VCL-207ENST00000624354 ITPR3Q14573 2671 aa6.55□□□□□ -1.36
VCL-207ENST00000624354 SOCS3O14543 225 aa6.55□□□□□ -1.36
VCL-207ENST00000624354 GNRH2O43555 120 aa6.55□□□□□ -1.36
VCL-207ENST00000624354 NTN5Q8WTR8 489 aaPredicted RBP6.55□□□□□ -1.36
VCL-207ENST00000624354 TMEM126AQ9H061 195 aa6.55□□□□□ -1.36
VCL-207ENST00000624354 PRORYQ9H606 182 aa6.55□□□□□ -1.36
VCL-207ENST00000624354 RNF223E7ERA6 249 aa6.55□□□□□ -1.36
VCL-207ENST00000624354 M0QXV9 152 aa6.55□□□□□ -1.36
VCL-207ENST00000624354 TRBV12-3P01733 135 aa6.55□□□□□ -1.36
VCL-207ENST00000624354 CFC1BP0CG36 223 aa6.55□□□□□ -1.36
VCL-207ENST00000624354 CFC1P0CG37 223 aa6.55□□□□□ -1.36
VCL-207ENST00000624354 CRIP2P52943 208 aaPredicted RBP6.55□□□□□ -1.36
VCL-207ENST00000624354 HERVK_113P61574 105 aa6.55□□□□□ -1.36
VCL-207ENST00000624354 C19orf54Q5BKX5 351 aa6.55□□□□□ -1.36
VCL-207ENST00000624354 PAPPA-AS1Q5QFB9 102 aa6.55□□□□□ -1.36
VCL-207ENST00000624354 Q8N1Y9 231 aa6.55□□□□□ -1.36
VCL-207ENST00000624354 PPDPFQ9H3Y8 114 aa6.55□□□□□ -1.36
VCL-207ENST00000624354 PRO1854Q9UHT4 67 aa6.55□□□□□ -1.36
VCL-207ENST00000624354 IGKV3-7A0A075B6H7 116 aa6.54□□□□□ -1.36
VCL-207ENST00000624354 IGHV1-69DA0A0B4J2H0 117 aa6.54□□□□□ -1.36
VCL-207ENST00000624354 F6UB75 175 aa6.54□□□□□ -1.36
VCL-207ENST00000624354 DUSP14O95147 198 aaKnown RBP6.54□□□□□ -1.36
VCL-207ENST00000624354 RNASE3P12724 160 aaKnown RBP6.54□□□□□ -1.36
VCL-207ENST00000624354 KLHL30-AS1Q8NEE0 82 aa6.54□□□□□ -1.36
VCL-207ENST00000624354 IGHV3OR16-10A0A075B7F0 116 aa6.54□□□□□ -1.36
VCL-207ENST00000624354 FAM19A4Q96LR4 140 aa6.54□□□□□ -1.36
VCL-207ENST00000624354 NF1P21359 2839 aa6.54□□□□□ -1.36
VCL-207ENST00000624354 TRPT1Q86TN4 253 aaKnown RBP6.53□□□□□ -1.36
VCL-207ENST00000624354 APRG1Q8IVJ8 170 aa6.53□□□□□ -1.36
VCL-207ENST00000624354 MDFICQ9P1T7 246 aa6.53□□□□□ -1.36
VCL-207ENST00000624354 TP53TG1Q9Y2A0 90 aa6.53□□□□□ -1.36
VCL-207ENST00000624354 APCP25054 2843 aa6.53□□□□□ -1.36
VCL-207ENST00000624354 IGHV3-11P01762 117 aa6.53□□□□□ -1.36
VCL-207ENST00000624354 COX6B1P14854 86 aa6.53□□□□□ -1.36
VCL-207ENST00000624354 USMG5Q96IX5 58 aa6.53□□□□□ -1.36
VCL-207ENST00000624354 ODF3Q96PU9 254 aa6.53□□□□□ -1.36
VCL-207ENST00000624354 FLNAP21333 2647 aaKnown RBP6.53□□□□□ -1.36
VCL-207ENST00000624354 IGHV4OR15-8A0A075B7B6 117 aa6.53□□□□□ -1.36
VCL-207ENST00000624354 A0A087WW49 117 aa6.53□□□□□ -1.36
VCL-207ENST00000624354 TRAV2A0A0B4J234 112 aa6.53□□□□□ -1.36
VCL-207ENST00000624354 A0A0J9YY99 117 aa6.53□□□□□ -1.36
VCL-207ENST00000624354 CRYGDP07320 174 aa6.53□□□□□ -1.36
VCL-207ENST00000624354 C11orf86A6NJI1 115 aa6.52□□□□□ -1.37
VCL-207ENST00000624354 PMVKQ15126 192 aa6.52□□□□□ -1.37
VCL-207ENST00000624354 POM121L12Q8N7R1 296 aa6.52□□□□□ -1.37
VCL-207ENST00000624354 C3orf56Q8N813 242 aa6.52□□□□□ -1.37
VCL-207ENST00000624354 RHPN1-AS1Q9BWJ2 59 aa6.52□□□□□ -1.37
VCL-207ENST00000624354 VCYO14598 125 aa6.52□□□□□ -1.37
VCL-207ENST00000624354 NXPH4O95158 308 aa6.52□□□□□ -1.37
VCL-207ENST00000624354 F5H697 171 aa6.51□□□□□ -1.37
VCL-207ENST00000624354 IGHV3-30P01768 117 aa6.51□□□□□ -1.37
VCL-207ENST00000624354 IGHV3-30-5P0DP03 117 aa6.51□□□□□ -1.37
VCL-207ENST00000624354 PF4V1P10720 104 aa6.51□□□□□ -1.37
VCL-207ENST00000624354 EMP1P54849 157 aa6.51□□□□□ -1.37
VCL-207ENST00000624354 LINC00315P59091 139 aa6.51□□□□□ -1.37
VCL-207ENST00000624354 BRD3OSQ6XYD6 125 aa6.51□□□□□ -1.37
VCL-207ENST00000624354 TMEM141Q96I45 108 aa6.51□□□□□ -1.37
VCL-207ENST00000624354 KIF25-AS1Q9Y6Z4 181 aa6.51□□□□□ -1.37
VCL-207ENST00000624354 IGLV4-69A0A075B6H9 119 aa6.51□□□□□ -1.37
VCL-207ENST00000624354 IGIPA6NJ69 53 aa6.51□□□□□ -1.37
VCL-207ENST00000624354 H3BUA1 57 aa6.51□□□□□ -1.37
VCL-207ENST00000624354 H7C2G1 150 aa6.51□□□□□ -1.37
VCL-207ENST00000624354 IGHV1-69P01742 117 aa6.51□□□□□ -1.37
VCL-207ENST00000624354 POLR2KP53803 58 aaKnown RBP6.51□□□□□ -1.37
VCL-207ENST00000624354 TEX49A0A1B0GTD5 131 aa6.51□□□□□ -1.37
VCL-207ENST00000624354 TSHBP01222 138 aa6.51□□□□□ -1.37
VCL-207ENST00000624354 LY6EQ16553 131 aa6.51□□□□□ -1.37
VCL-207ENST00000624354 TMEM170BQ5T4T1 132 aa6.51□□□□□ -1.37
VCL-207ENST00000624354 CHCHD5Q9BSY4 110 aa6.51□□□□□ -1.37
VCL-207ENST00000624354 ATXN8Q156A1 80 aa6.5□□□□□ -1.37
VCL-207ENST00000624354 SUMO4Q6EEV6 95 aa6.5□□□□□ -1.37
VCL-207ENST00000624354 TIMM17AQ99595 171 aa6.5□□□□□ -1.37
VCL-207ENST00000624354 DAZ1Q9NQZ3 744 aaKnown RBP6.5□□□□□ -1.37
VCL-207ENST00000624354 A0A087WWL8 130 aa6.5□□□□□ -1.37
VCL-207ENST00000624354 SDHAF1A6NFY7 115 aa6.5□□□□□ -1.37
VCL-207ENST00000624354 KLLNB2CW77 178 aa6.5□□□□□ -1.37
VCL-207ENST00000624354 H3BMM0 161 aa6.5□□□□□ -1.37
VCL-207ENST00000624354 IGHG2P01859 326 aa6.5□□□□□ -1.37
VCL-207ENST00000624354 RPL39P62891 51 aaKnown RBP6.5□□□□□ -1.37
VCL-207ENST00000624354 LINC01620Q4KN68 170 aa6.5□□□□□ -1.37
VCL-207ENST00000624354 Q6ZS46 218 aa6.5□□□□□ -1.37
VCL-207ENST00000624354 UBE2WQ96B02 151 aa6.5□□□□□ -1.37
VCL-207ENST00000624354 JPT2Q9H910 190 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms