RNA–Protein interactions for RNA: ENST00000622972.3

LINC00963-215, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 444 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-215ENST00000622972 SSTP61278 116 aa4.01□□□□□ -1.77
LINC00963-215ENST00000622972 SLAQ13239 276 aa4.01□□□□□ -1.77
LINC00963-215ENST00000622972 MRPL23Q16540 153 aaKnown RBP4.01□□□□□ -1.77
LINC00963-215ENST00000622972 TMEM241Q24JQ0 296 aa4.01□□□□□ -1.77
LINC00963-215ENST00000622972 LYZL1Q6UWQ5 148 aa4.01□□□□□ -1.77
LINC00963-215ENST00000622972 SFRP2Q96HF1 295 aa4.01□□□□□ -1.77
LINC00963-215ENST00000622972 UPK3BQ9BT76 320 aa4.01□□□□□ -1.77
LINC00963-215ENST00000622972 SMDT1Q9H4I9 107 aa4.01□□□□□ -1.77
LINC00963-215ENST00000622972 OSTCQ9NRP0 149 aa4.01□□□□□ -1.77
LINC00963-215ENST00000622972 NAT8Q9UHE5 227 aa4.01□□□□□ -1.77
LINC00963-215ENST00000622972 PRO0255Q9UI72 69 aa4.01□□□□□ -1.77
LINC00963-215ENST00000622972 HHLA3Q9XRX5 114 aa4.01□□□□□ -1.77
LINC00963-215ENST00000622972 DYNC1H1Q14204 4646 aaKnown RBP4.01□□□□□ -1.77
LINC00963-215ENST00000622972 TRAV9-2A0A087WT02 112 aa4□□□□□ -1.77
LINC00963-215ENST00000622972 SMIM27A0A1W2PRY6 76 aa4□□□□□ -1.77
LINC00963-215ENST00000622972 GATCO43716 136 aaKnown RBP4□□□□□ -1.77
LINC00963-215ENST00000622972 SRIP30626 198 aa4□□□□□ -1.77
LINC00963-215ENST00000622972 ERVFC1-1P60608 527 aa4□□□□□ -1.77
LINC00963-215ENST00000622972 RAB14P61106 215 aa4□□□□□ -1.77
LINC00963-215ENST00000622972 FAM74A3Q4VXF1 159 aa4□□□□□ -1.77
LINC00963-215ENST00000622972 SLC7A5P1Q8MH63 180 aa4□□□□□ -1.77
LINC00963-215ENST00000622972 SLC25A29Q8N8R3 303 aa4□□□□□ -1.77
LINC00963-215ENST00000622972 FER1L6-AS1Q8NA97 138 aa4□□□□□ -1.77
LINC00963-215ENST00000622972 KRTAP4-5Q9BYR2 181 aa4□□□□□ -1.77
LINC00963-215ENST00000622972 KRTAP1-5Q9BYS1 174 aa4□□□□□ -1.77
LINC00963-215ENST00000622972 BTF3P20290 206 aaKnown RBP3.99□□□□□ -1.77
LINC00963-215ENST00000622972 EVI2AP22794 236 aa3.99□□□□□ -1.77
LINC00963-215ENST00000622972 S100A4P26447 101 aaKnown RBP3.99□□□□□ -1.77
LINC00963-215ENST00000622972 PIK3CD-AS1Q5SR53 167 aa3.99□□□□□ -1.77
LINC00963-215ENST00000622972 ATRAIDQ6UW56 229 aa3.99□□□□□ -1.77
LINC00963-215ENST00000622972 UQCC3Q6UW78 93 aa3.99□□□□□ -1.77
LINC00963-215ENST00000622972 NEGR1Q7Z3B1 354 aa3.99□□□□□ -1.77
LINC00963-215ENST00000622972 NFE4Q86UQ8 179 aa3.99□□□□□ -1.77
LINC00963-215ENST00000622972 ZFP82Q8N141 532 aa3.99□□□□□ -1.77
LINC00963-215ENST00000622972 NUP35Q8NFH5 326 aa3.99□□□□□ -1.77
LINC00963-215ENST00000622972 OR4C5Q8NGB2 326 aa3.99□□□□□ -1.77
LINC00963-215ENST00000622972 OR10G8Q8NGN5 311 aa3.99□□□□□ -1.77
LINC00963-215ENST00000622972 TSKUQ8WUA8 353 aa3.99□□□□□ -1.77
LINC00963-215ENST00000622972 RNF185Q96GF1 192 aa3.99□□□□□ -1.77
LINC00963-215ENST00000622972 PGLYRP4Q96LB8 373 aa3.99□□□□□ -1.77
LINC00963-215ENST00000622972 TPPP3Q9BW30 176 aa3.99□□□□□ -1.77
LINC00963-215ENST00000622972 KRTAP4-7Q9BYR0 210 aa3.99□□□□□ -1.77
LINC00963-215ENST00000622972 CARHSP1Q9Y2V2 147 aaKnown RBP3.99□□□□□ -1.77
LINC00963-215ENST00000622972 PHLDA3Q9Y5J5 127 aa3.99□□□□□ -1.77
LINC00963-215ENST00000622972 PKHD1P08F94 4074 aa3.99□□□□□ -1.77
LINC00963-215ENST00000622972 A0A1B0GXF2 115 aa3.98□□□□□ -1.77
LINC00963-215ENST00000622972 HIGD1CA8MV81 97 aa3.98□□□□□ -1.77
LINC00963-215ENST00000622972 K7EQD1 137 aa3.98□□□□□ -1.77
LINC00963-215ENST00000622972 NTF3P20783 257 aa3.98□□□□□ -1.77
LINC00963-215ENST00000622972 RPS20P60866 119 aaKnown RBP3.98□□□□□ -1.77
LINC00963-215ENST00000622972 LCE5AQ5TCM9 118 aa3.98□□□□□ -1.77
LINC00963-215ENST00000622972 FAM74A4Q5TZK3 123 aa3.98□□□□□ -1.77
LINC00963-215ENST00000622972 SUMO4Q6EEV6 95 aa3.98□□□□□ -1.77
LINC00963-215ENST00000622972 LYPD5Q6UWN5 251 aa3.98□□□□□ -1.77
LINC00963-215ENST00000622972 TNFRSF18Q9Y5U5 241 aa3.98□□□□□ -1.77
LINC00963-215ENST00000622972 TRAV26-2A0A0B4J265 109 aa3.97□□□□□ -1.77
LINC00963-215ENST00000622972 A8MWV9 139 aa3.97□□□□□ -1.77
LINC00963-215ENST00000622972 F8W036 122 aa3.97□□□□□ -1.77
LINC00963-215ENST00000622972 M0QY20 66 aa3.97□□□□□ -1.77
LINC00963-215ENST00000622972 PSCAO43653 123 aa3.97□□□□□ -1.77
LINC00963-215ENST00000622972 FUSP35637 526 aaKnown RBP eCLIP3.97□□□□□ -1.774e-7■□□□□ 10.2
LINC00963-215ENST00000622972 RPS10P46783 165 aaKnown RBP3.97□□□□□ -1.77
LINC00963-215ENST00000622972 ZFP2Q6ZN57 461 aa3.97□□□□□ -1.77
LINC00963-215ENST00000622972 NEXN-AS1Q8NBZ9 246 aa3.97□□□□□ -1.77
LINC00963-215ENST00000622972 DAZAP1Q96EP5 407 aaKnown RBP3.97□□□□□ -1.77
LINC00963-215ENST00000622972 YPEL4Q96NS1 127 aa3.97□□□□□ -1.77
LINC00963-215ENST00000622972 SEC11CQ9BY50 192 aa3.97□□□□□ -1.77
LINC00963-215ENST00000622972 GFRA4Q9GZZ7 299 aa3.97□□□□□ -1.77
LINC00963-215ENST00000622972 DNAH8Q96JB1 4490 aa3.96□□□□□ -1.78
LINC00963-215ENST00000622972 TRBV6-4A0A1B0GX49 114 aa3.96□□□□□ -1.78
LINC00963-215ENST00000622972 C7orf77A4D0Y5 90 aa3.96□□□□□ -1.78
LINC00963-215ENST00000622972 GAGE12JA6NER3 117 aa3.96□□□□□ -1.78
LINC00963-215ENST00000622972 A8MWL6 223 aa3.96□□□□□ -1.78
LINC00963-215ENST00000622972 EPM2AB3EWF7 344 aa3.96□□□□□ -1.78
LINC00963-215ENST00000622972 SMKR1H3BMG3 65 aa3.96□□□□□ -1.78
LINC00963-215ENST00000622972 SLPIP03973 132 aa3.96□□□□□ -1.78
LINC00963-215ENST00000622972 DNAH10OSP0CZ25 163 aa3.96□□□□□ -1.78
LINC00963-215ENST00000622972 UBE2D3P61077 147 aa3.96□□□□□ -1.78
LINC00963-215ENST00000622972 UBE2D2P62837 147 aa3.96□□□□□ -1.78
LINC00963-215ENST00000622972 GAGE1Q13065 139 aa3.96□□□□□ -1.78
LINC00963-215ENST00000622972 GAGE4Q13068 117 aa3.96□□□□□ -1.78
LINC00963-215ENST00000622972 GAGE5Q13069 117 aa3.96□□□□□ -1.78
LINC00963-215ENST00000622972 SPANXN1Q5VSR9 72 aa3.96□□□□□ -1.78
LINC00963-215ENST00000622972 MRPL54Q6P161 138 aaKnown RBP3.96□□□□□ -1.78
LINC00963-215ENST00000622972 WDR73Q6P4I2 378 aa3.96□□□□□ -1.78
LINC00963-215ENST00000622972 NTM-AS1Q6ZSK4 140 aa3.96□□□□□ -1.78
LINC00963-215ENST00000622972 SH2D6Q7Z4S9 175 aa3.96□□□□□ -1.78
LINC00963-215ENST00000622972 WFDC10BQ8IUB3 73 aa3.96□□□□□ -1.78
LINC00963-215ENST00000622972 AMN1Q8IY45 258 aa3.96□□□□□ -1.78
LINC00963-215ENST00000622972 C10orf126Q8N4M7 172 aa3.96□□□□□ -1.78
LINC00963-215ENST00000622972 GATD1Q8NB37 220 aa3.96□□□□□ -1.78
LINC00963-215ENST00000622972 DEFB104AQ8WTQ1 72 aa3.96□□□□□ -1.78
LINC00963-215ENST00000622972 RPL39LQ96EH5 51 aaKnown RBP3.96□□□□□ -1.78
LINC00963-215ENST00000622972 AP1S3Q96PC3 154 aa3.96□□□□□ -1.78
LINC00963-215ENST00000622972 PRADC1Q9BSG0 188 aa3.96□□□□□ -1.78
LINC00963-215ENST00000622972 BIN3Q9NQY0 253 aa3.96□□□□□ -1.78
LINC00963-215ENST00000622972 KIAA1109Q2LD37 5005 aa3.96□□□□□ -1.78
LINC00963-215ENST00000622972 HERC2O95714 4834 aa3.96□□□□□ -1.78
LINC00963-215ENST00000622972 A0A087WTM6 91 aa3.95□□□□□ -1.78
LINC00963-215ENST00000622972 TRAV8-6A0A0B4J262 113 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms