RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 IGHV3OR16-12A0A075B7B8 117 aa13.83□□□□□ -0.2
PSPC1-206ENST00000619300 C2orf66Q6UXQ4 117 aa13.83□□□□□ -0.2
PSPC1-206ENST00000619300 GIG44P09565 113 aaPredicted RBP13.82□□□□□ -0.2
PSPC1-206ENST00000619300 UFSP1Q6NVU6 142 aa13.82□□□□□ -0.2
PSPC1-206ENST00000619300 EDA2RQ9HAV5 297 aa13.81□□□□□ -0.2
PSPC1-206ENST00000619300 MRPS16Q9Y3D3 137 aaKnown RBP13.81□□□□□ -0.2
PSPC1-206ENST00000619300 IGHV3-73A0A0B4J1V6 119 aa13.81□□□□□ -0.2
PSPC1-206ENST00000619300 H7C1H1 209 aa13.81□□□□□ -0.2
PSPC1-206ENST00000619300 SLC25A34Q6PIV7 304 aa13.81□□□□□ -0.2
PSPC1-206ENST00000619300 ZFP2Q6ZN57 461 aa13.81□□□□□ -0.2
PSPC1-206ENST00000619300 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.81□□□□□ -0.2
PSPC1-206ENST00000619300 STPG4Q8N801 248 aa13.81□□□□□ -0.2
PSPC1-206ENST00000619300 CFAP126Q5VTH2 177 aa13.8□□□□□ -0.2
PSPC1-206ENST00000619300 RPL35AP18077 110 aaKnown RBP13.8□□□□□ -0.2
PSPC1-206ENST00000619300 MRPL16Q9NX20 251 aaKnown RBP13.8□□□□□ -0.2
PSPC1-206ENST00000619300 A0A087WX48 190 aa13.79□□□□□ -0.2
PSPC1-206ENST00000619300 ANKRD39Q53RE8 183 aa13.79□□□□□ -0.2
PSPC1-206ENST00000619300 ERASQ7Z444 233 aa13.79□□□□□ -0.2
PSPC1-206ENST00000619300 CYSLTR1Q9Y271 337 aa13.79□□□□□ -0.2
PSPC1-206ENST00000619300 LINC01549A6NIU2 74 aa13.78□□□□□ -0.2
PSPC1-206ENST00000619300 IGKCP01834 107 aa13.78□□□□□ -0.2
PSPC1-206ENST00000619300 INSL3P51460 131 aa13.78□□□□□ -0.2
PSPC1-206ENST00000619300 RNASE8Q8TDE3 154 aaKnown RBP13.78□□□□□ -0.2
PSPC1-206ENST00000619300 TRAV12-1A0A0B4J245 112 aa13.78□□□□□ -0.2
PSPC1-206ENST00000619300 DPM2O94777 84 aa13.78□□□□□ -0.2
PSPC1-206ENST00000619300 COX8AP10176 69 aa13.78□□□□□ -0.2
PSPC1-206ENST00000619300 IL17DQ8TAD2 202 aa13.78□□□□□ -0.2
PSPC1-206ENST00000619300 DEFB104AQ8WTQ1 72 aa13.78□□□□□ -0.2
PSPC1-206ENST00000619300 CITED1Q99966 193 aa13.78□□□□□ -0.2
PSPC1-206ENST00000619300 C1QTNF4Q9BXJ3 329 aa13.78□□□□□ -0.2
PSPC1-206ENST00000619300 HHLA3Q9XRX5 114 aa13.78□□□□□ -0.2
PSPC1-206ENST00000619300 RHODO00212 210 aa13.77□□□□□ -0.21
PSPC1-206ENST00000619300 MRPL35Q9NZE8 188 aaKnown RBP13.77□□□□□ -0.21
PSPC1-206ENST00000619300 RS1O15537 224 aa13.76□□□□□ -0.21
PSPC1-206ENST00000619300 RIPPLY3P57055 190 aa13.76□□□□□ -0.21
PSPC1-206ENST00000619300 TMEM263Q8WUH6 116 aaKnown RBP13.76□□□□□ -0.21
PSPC1-206ENST00000619300 TP73-AS1Q9UF72 201 aa13.76□□□□□ -0.21
PSPC1-206ENST00000619300 JMJD1CQ15652 2540 aa13.76□□□□□ -0.21
PSPC1-206ENST00000619300 I3L3M4 83 aa13.76□□□□□ -0.21
PSPC1-206ENST00000619300 NEXN-AS1Q8NBZ9 246 aa13.76□□□□□ -0.21
PSPC1-206ENST00000619300 TP53TG1Q9Y2A0 90 aa13.76□□□□□ -0.21
PSPC1-206ENST00000619300 FLNBO75369 2602 aaKnown RBP13.76□□□□□ -0.21
PSPC1-206ENST00000619300 NPSP0C0P6 89 aa13.75□□□□□ -0.21
PSPC1-206ENST00000619300 C9orf66Q5T8R8 295 aa13.75□□□□□ -0.21
PSPC1-206ENST00000619300 Q6ZSN1 163 aa13.75□□□□□ -0.21
PSPC1-206ENST00000619300 CSNK1G2-AS1Q8NCQ2 148 aa13.75□□□□□ -0.21
PSPC1-206ENST00000619300 P0DMU3 169 aa13.74□□□□□ -0.21
PSPC1-206ENST00000619300 FAM231AP0DMU4 169 aa13.74□□□□□ -0.21
PSPC1-206ENST00000619300 FAM231CP0DMU5 169 aa13.74□□□□□ -0.21
PSPC1-206ENST00000619300 RHOHQ15669 191 aa13.74□□□□□ -0.21
PSPC1-206ENST00000619300 SPATA3Q8NHX4 192 aa13.74□□□□□ -0.21
PSPC1-206ENST00000619300 BAALCQ8WXS3 180 aa13.74□□□□□ -0.21
PSPC1-206ENST00000619300 IGIPA6NJ69 53 aa13.74□□□□□ -0.21
PSPC1-206ENST00000619300 TSHBP01222 138 aa13.74□□□□□ -0.21
PSPC1-206ENST00000619300 BATFQ16520 125 aa13.74□□□□□ -0.21
PSPC1-206ENST00000619300 TRGV1A0A0A0MS02 117 aa13.73□□□□□ -0.21
PSPC1-206ENST00000619300 IGHV3-53P01767 116 aa13.73□□□□□ -0.21
PSPC1-206ENST00000619300 TNFRSF18Q9Y5U5 241 aa13.73□□□□□ -0.21
PSPC1-206ENST00000619300 F8VRH5 84 aa13.73□□□□□ -0.21
PSPC1-206ENST00000619300 PLNP26678 52 aa13.73□□□□□ -0.21
PSPC1-206ENST00000619300 RPL39P62891 51 aaKnown RBP13.73□□□□□ -0.21
PSPC1-206ENST00000619300 GTSCR1Q86UQ5 136 aa13.73□□□□□ -0.21
PSPC1-206ENST00000619300 ORAOV1Q8WV07 137 aa13.73□□□□□ -0.21
PSPC1-206ENST00000619300 CHTOPQ9Y3Y2 248 aaKnown RBP13.73□□□□□ -0.21
PSPC1-206ENST00000619300 TCTAP57738 103 aa13.72□□□□□ -0.21
PSPC1-206ENST00000619300 TMEM141Q96I45 108 aa13.72□□□□□ -0.21
PSPC1-206ENST00000619300 PRSS29PA6NIE9 313 aa13.71□□□□□ -0.21
PSPC1-206ENST00000619300 FGF6P10767 208 aa13.71□□□□□ -0.21
PSPC1-206ENST00000619300 DAZ2Q13117 558 aaKnown RBP13.71□□□□□ -0.22
PSPC1-206ENST00000619300 ZC2HC1BQ5TFG8 222 aa13.71□□□□□ -0.22
PSPC1-206ENST00000619300 BOD1L2Q8IYS8 172 aa13.71□□□□□ -0.22
PSPC1-206ENST00000619300 OR4C5Q8NGB2 326 aa13.71□□□□□ -0.22
PSPC1-206ENST00000619300 C16orf74Q96GX8 76 aa13.71□□□□□ -0.22
PSPC1-206ENST00000619300 TIMM17AQ99595 171 aa13.71□□□□□ -0.22
PSPC1-206ENST00000619300 Q9UF83 564 aa13.71□□□□□ -0.22
PSPC1-206ENST00000619300 TENM1Q9UKZ4 2725 aa13.7□□□□□ -0.22
PSPC1-206ENST00000619300 CBY1Q9Y3M2 126 aa13.7□□□□□ -0.22
PSPC1-206ENST00000619300 NMUP48645 174 aa13.69□□□□□ -0.22
PSPC1-206ENST00000619300 Q6ZTI0 123 aa13.69□□□□□ -0.22
PSPC1-206ENST00000619300 DNAJC30Q96LL9 226 aa13.69□□□□□ -0.22
PSPC1-206ENST00000619300 NOP10Q9NPE3 64 aaKnown RBP13.69□□□□□ -0.22
PSPC1-206ENST00000619300 F8P00451 2351 aa13.69□□□□□ -0.22
PSPC1-206ENST00000619300 HINT1P49773 126 aaPredicted RBP13.69□□□□□ -0.22
PSPC1-206ENST00000619300 C20orf203Q8NBC4 194 aa13.69□□□□□ -0.22
PSPC1-206ENST00000619300 NACAE9PAV3 2078 aa13.69□□□□□ -0.22
PSPC1-206ENST00000619300 VWFP04275 2813 aa13.68□□□□□ -0.22
PSPC1-206ENST00000619300 PLAC8L1A1L4L8 177 aa13.68□□□□□ -0.22
PSPC1-206ENST00000619300 RRN3P1Q2M238 152 aa13.68□□□□□ -0.22
PSPC1-206ENST00000619300 C2orf91Q6ZV80 131 aa13.68□□□□□ -0.22
PSPC1-206ENST00000619300 PCP2Q8IVA1 136 aa13.68□□□□□ -0.22
PSPC1-206ENST00000619300 IGKV2D-26A0A0A0MRZ7 120 aa13.67□□□□□ -0.22
PSPC1-206ENST00000619300 PMVKQ15126 192 aa13.67□□□□□ -0.22
PSPC1-206ENST00000619300 ZNF479Q96JC4 524 aa13.67□□□□□ -0.22
PSPC1-206ENST00000619300 CST9LQ9H4G1 147 aa13.66□□□□□ -0.22
PSPC1-206ENST00000619300 NOTCH3Q9UM47 2321 aa13.66□□□□□ -0.22
PSPC1-206ENST00000619300 TRAV4A0A0B4J268 109 aa13.66□□□□□ -0.22
PSPC1-206ENST00000619300 OVOL2Q9BRP0 275 aa13.66□□□□□ -0.22
PSPC1-206ENST00000619300 ATRQ13535 2644 aa13.65□□□□□ -0.22
PSPC1-206ENST00000619300 MPV17L2Q567V2 206 aa13.65□□□□□ -0.22
PSPC1-206ENST00000619300 WFDC9Q8NEX5 89 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms