RNA–Protein interactions for RNA: ENST00000618865.4

SEMA3B-213, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SEMA3B, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-213ENST00000618865 TRBV25-1A0A075B6N4 114 aa12.48□□□□□ -0.41
SEMA3B-213ENST00000618865 INSL3P51460 131 aa12.48□□□□□ -0.41
SEMA3B-213ENST00000618865 CUBNO60494 3623 aa12.48□□□□□ -0.41
SEMA3B-213ENST00000618865 K7EMI3 77 aa12.48□□□□□ -0.41
SEMA3B-213ENST00000618865 CHAC1Q9BUX1 264 aa12.48□□□□□ -0.41
SEMA3B-213ENST00000618865 TM2D2Q9BX73 214 aa12.48□□□□□ -0.41
SEMA3B-213ENST00000618865 FXYD2P54710 66 aa12.47□□□□□ -0.41
SEMA3B-213ENST00000618865 SAMD5Q5TGI4 173 aa12.47□□□□□ -0.41
SEMA3B-213ENST00000618865 NEXN-AS1Q8NBZ9 246 aa12.47□□□□□ -0.41
SEMA3B-213ENST00000618865 IGHV3-16A0A0C4DH30 117 aa12.47□□□□□ -0.41
SEMA3B-213ENST00000618865 SNRPD3P62318 126 aaKnown RBP12.47□□□□□ -0.41
SEMA3B-213ENST00000618865 SPANXB1Q9NS25 103 aaPredicted RBP12.47□□□□□ -0.41
SEMA3B-213ENST00000618865 GCSHP23434 173 aa12.46□□□□□ -0.41
SEMA3B-213ENST00000618865 SLURP1P55000 103 aa12.46□□□□□ -0.41
SEMA3B-213ENST00000618865 ETDBQ3ZM63 59 aa12.46□□□□□ -0.41
SEMA3B-213ENST00000618865 Q8N1Y9 231 aa12.46□□□□□ -0.41
SEMA3B-213ENST00000618865 BAALCQ8WXS3 180 aa12.46□□□□□ -0.41
SEMA3B-213ENST00000618865 PRRC2AP48634 2157 aaKnown RBP12.46□□□□□ -0.41
SEMA3B-213ENST00000618865 F8VRH5 84 aa12.46□□□□□ -0.42
SEMA3B-213ENST00000618865 H7C1H1 209 aa12.46□□□□□ -0.42
SEMA3B-213ENST00000618865 SMIM13P0DJ93 91 aa12.46□□□□□ -0.42
SEMA3B-213ENST00000618865 WFDC2Q14508 124 aa12.46□□□□□ -0.42
SEMA3B-213ENST00000618865 TRAV12-1A0A0B4J245 112 aa12.45□□□□□ -0.42
SEMA3B-213ENST00000618865 DUSP14O95147 198 aaKnown RBP12.45□□□□□ -0.42
SEMA3B-213ENST00000618865 FAM74A4Q5TZK3 123 aa12.45□□□□□ -0.42
SEMA3B-213ENST00000618865 DUX3Q96PT4 197 aa12.45□□□□□ -0.42
SEMA3B-213ENST00000618865 F5H697 171 aa12.45□□□□□ -0.42
SEMA3B-213ENST00000618865 ELANEP08246 267 aa12.45□□□□□ -0.42
SEMA3B-213ENST00000618865 NF1P21359 2839 aa12.45□□□□□ -0.42
SEMA3B-213ENST00000618865 XGP55808 180 aa12.45□□□□□ -0.42
SEMA3B-213ENST00000618865 SYT8Q8NBV8 401 aa12.45□□□□□ -0.42
SEMA3B-213ENST00000618865 UBE2E2Q96LR5 201 aa12.45□□□□□ -0.42
SEMA3B-213ENST00000618865 C9orf85Q96MD7 179 aa12.45□□□□□ -0.42
SEMA3B-213ENST00000618865 PLNP26678 52 aa12.44□□□□□ -0.42
SEMA3B-213ENST00000618865 HIGD1BQ9P298 99 aa12.44□□□□□ -0.42
SEMA3B-213ENST00000618865 LGALS9O00182 355 aa12.44□□□□□ -0.42
SEMA3B-213ENST00000618865 ZFAND6Q6FIF0 208 aa12.44□□□□□ -0.42
SEMA3B-213ENST00000618865 ITPR3Q14573 2671 aa12.44□□□□□ -0.42
SEMA3B-213ENST00000618865 A0A1W2PRX2 142 aa12.44□□□□□ -0.42
SEMA3B-213ENST00000618865 HLA-DRB4P13762 266 aa12.44□□□□□ -0.42
SEMA3B-213ENST00000618865 HLA-DRB4X5D2U9 266 aa12.44□□□□□ -0.42
SEMA3B-213ENST00000618865 K7ERJ3 54 aa12.43□□□□□ -0.42
SEMA3B-213ENST00000618865 TSHBP01222 138 aa12.43□□□□□ -0.42
SEMA3B-213ENST00000618865 POLR2KP53803 58 aaKnown RBP12.43□□□□□ -0.42
SEMA3B-213ENST00000618865 DEFB113Q30KQ7 82 aa12.43□□□□□ -0.42
SEMA3B-213ENST00000618865 Q6ZUT4 128 aa12.43□□□□□ -0.42
SEMA3B-213ENST00000618865 TEX29Q8N6K0 151 aa12.43□□□□□ -0.42
SEMA3B-213ENST00000618865 ODF3Q96PU9 254 aa12.43□□□□□ -0.42
SEMA3B-213ENST00000618865 SONP18583 2426 aaKnown RBP12.43□□□□□ -0.42
SEMA3B-213ENST00000618865 PRSS29PA6NIE9 313 aa12.43□□□□□ -0.42
SEMA3B-213ENST00000618865 RBMY1A1P0DJD3 496 aaKnown RBP12.43□□□□□ -0.42
SEMA3B-213ENST00000618865 RBMY1CP0DJD4 496 aa12.43□□□□□ -0.42
SEMA3B-213ENST00000618865 RPL39P62891 51 aaKnown RBP12.43□□□□□ -0.42
SEMA3B-213ENST00000618865 RBMY1FQ15415 496 aaKnown RBP12.43□□□□□ -0.42
SEMA3B-213ENST00000618865 AMTNQ6UX39 209 aa12.43□□□□□ -0.42
SEMA3B-213ENST00000618865 FAM19A5Q7Z5A7 132 aaPredicted RBP12.43□□□□□ -0.42
SEMA3B-213ENST00000618865 Q96MF0 132 aa12.43□□□□□ -0.42
SEMA3B-213ENST00000618865 KNCNA6PVL3 124 aa12.42□□□□□ -0.42
SEMA3B-213ENST00000618865 MORN3Q6PF18 240 aaPredicted RBP12.42□□□□□ -0.42
SEMA3B-213ENST00000618865 CHD6Q8TD26 2715 aa12.42□□□□□ -0.42
SEMA3B-213ENST00000618865 CRYGDP07320 174 aa12.42□□□□□ -0.42
SEMA3B-213ENST00000618865 MEIG1Q5JSS6 88 aa12.42□□□□□ -0.42
SEMA3B-213ENST00000618865 IGHV1OR15-1A0A075B7D0 117 aa12.41□□□□□ -0.42
SEMA3B-213ENST00000618865 ZFP2Q6ZN57 461 aa12.41□□□□□ -0.42
SEMA3B-213ENST00000618865 RNF152Q8N8N0 203 aa12.41□□□□□ -0.42
SEMA3B-213ENST00000618865 CDIP1Q9H305 208 aa12.41□□□□□ -0.42
SEMA3B-213ENST00000618865 TP53TG1Q9Y2A0 90 aa12.41□□□□□ -0.42
SEMA3B-213ENST00000618865 PRM2P04554 102 aa12.41□□□□□ -0.42
SEMA3B-213ENST00000618865 PPP1R17O96001 155 aa12.41□□□□□ -0.42
SEMA3B-213ENST00000618865 EMP1P54849 157 aa12.41□□□□□ -0.42
SEMA3B-213ENST00000618865 KRTAP1-3Q8IUG1 177 aa12.41□□□□□ -0.42
SEMA3B-213ENST00000618865 TENM4Q6N022 2769 aa12.4□□□□□ -0.42
SEMA3B-213ENST00000618865 SDHAF1A6NFY7 115 aa12.4□□□□□ -0.42
SEMA3B-213ENST00000618865 LINC00694P0DN24 101 aa12.4□□□□□ -0.42
SEMA3B-213ENST00000618865 KIR2DL5BQ8NHK3 375 aa12.4□□□□□ -0.42
SEMA3B-213ENST00000618865 DNAJC30Q96LL9 226 aa12.39□□□□□ -0.43
SEMA3B-213ENST00000618865 ZNF56Q15929 161 aa12.39□□□□□ -0.43
SEMA3B-213ENST00000618865 CEND1Q8N111 149 aa12.39□□□□□ -0.43
SEMA3B-213ENST00000618865 ZNF256Q9Y2P7 627 aaPredicted RBP12.39□□□□□ -0.43
SEMA3B-213ENST00000618865 IGIPA6NJ69 53 aa12.38□□□□□ -0.43
SEMA3B-213ENST00000618865 NHP2Q9NX24 153 aaKnown RBP12.38□□□□□ -0.43
SEMA3B-213ENST00000618865 M0QY20 66 aa12.38□□□□□ -0.43
SEMA3B-213ENST00000618865 HTN1P15515 57 aa12.38□□□□□ -0.43
SEMA3B-213ENST00000618865 DEFB131AP59861 70 aa12.38□□□□□ -0.43
SEMA3B-213ENST00000618865 PHLDA1Q8WV24 401 aaPredicted RBP12.38□□□□□ -0.43
SEMA3B-213ENST00000618865 RBMY1BA6NDE4 496 aaKnown RBP12.38□□□□□ -0.43
SEMA3B-213ENST00000618865 RBMY1EA6NEQ0 496 aaKnown RBP12.38□□□□□ -0.43
SEMA3B-213ENST00000618865 RBMY1DP0C7P1 496 aaKnown RBP12.38□□□□□ -0.43
SEMA3B-213ENST00000618865 VCYO14598 125 aa12.37□□□□□ -0.43
SEMA3B-213ENST00000618865 IGLV4-69A0A075B6H9 119 aa12.37□□□□□ -0.43
SEMA3B-213ENST00000618865 ZNF876PQ49A33 203 aa12.37□□□□□ -0.43
SEMA3B-213ENST00000618865 KHDC1LQ5JSQ8 128 aa12.36□□□□□ -0.43
SEMA3B-213ENST00000618865 Q8N2B8 174 aa12.36□□□□□ -0.43
SEMA3B-213ENST00000618865 PRADC1Q9BSG0 188 aa12.36□□□□□ -0.43
SEMA3B-213ENST00000618865 TRBV27A0A0K0K1C4 114 aa12.36□□□□□ -0.43
SEMA3B-213ENST00000618865 C11orf86A6NJI1 115 aa12.36□□□□□ -0.43
SEMA3B-213ENST00000618865 TMEM61Q8N0U2 210 aa12.36□□□□□ -0.43
SEMA3B-213ENST00000618865 KIR2DL4Q99706 377 aa12.36□□□□□ -0.43
SEMA3B-213ENST00000618865 NIPBLQ6KC79 2804 aaeCLIP12.36□□□□□ -0.43
SEMA3B-213ENST00000618865 FLNAP21333 2647 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms