RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 U3KQK5 164 aa9.91□□□□□ -0.82
PPP4R3B-206ENST00000616407 LGALS9O00182 355 aa9.91□□□□□ -0.82
PPP4R3B-206ENST00000616407 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.9□□□□□ -0.82
PPP4R3B-206ENST00000616407 IGKV2-29A2NJV5 120 aaPredicted RBP9.9□□□□□ -0.82
PPP4R3B-206ENST00000616407 EDN2P20800 178 aa9.9□□□□□ -0.82
PPP4R3B-206ENST00000616407 BOD1L2Q8IYS8 172 aa9.9□□□□□ -0.82
PPP4R3B-206ENST00000616407 TOMM6Q96B49 74 aa9.9□□□□□ -0.82
PPP4R3B-206ENST00000616407 ZNF702PQ9H963 129 aa9.9□□□□□ -0.82
PPP4R3B-206ENST00000616407 TNRC18O15417 2968 aaPredicted RBP9.9□□□□□ -0.83
PPP4R3B-206ENST00000616407 COL27A1Q8IZC6 1860 aaPredicted RBP9.89□□□□□ -0.83
PPP4R3B-206ENST00000616407 MORN3Q6PF18 240 aaPredicted RBP9.89□□□□□ -0.83
PPP4R3B-206ENST00000616407 BAALCQ8WXS3 180 aa9.89□□□□□ -0.83
PPP4R3B-206ENST00000616407 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.89□□□□□ -0.83
PPP4R3B-206ENST00000616407 TMEM86BQ8N661 226 aa9.89□□□□□ -0.83
PPP4R3B-206ENST00000616407 CENPEQ02224 2701 aa9.89□□□□□ -0.83
PPP4R3B-206ENST00000616407 Q6ZSV7 163 aa9.89□□□□□ -0.83
PPP4R3B-206ENST00000616407 MAP6D1Q9H9H5 199 aa9.89□□□□□ -0.83
PPP4R3B-206ENST00000616407 A0A0J9YXV3 536 aa9.88□□□□□ -0.83
PPP4R3B-206ENST00000616407 C18orf65Q6ZTR6 163 aa9.88□□□□□ -0.83
PPP4R3B-206ENST00000616407 PRIMA1Q86XR5 153 aa9.88□□□□□ -0.83
PPP4R3B-206ENST00000616407 PSMG3-AS1Q96PY0 264 aa9.88□□□□□ -0.83
PPP4R3B-206ENST00000616407 CRIP2P52943 208 aaPredicted RBP9.88□□□□□ -0.83
PPP4R3B-206ENST00000616407 BBC3Q96PG8 261 aaPredicted RBP9.88□□□□□ -0.83
PPP4R3B-206ENST00000616407 H3BMM0 161 aa9.87□□□□□ -0.83
PPP4R3B-206ENST00000616407 TRAV12-1A0A0B4J245 112 aa9.87□□□□□ -0.83
PPP4R3B-206ENST00000616407 LINC00158P58513 81 aa9.87□□□□□ -0.83
PPP4R3B-206ENST00000616407 TAL2Q16559 108 aa9.87□□□□□ -0.83
PPP4R3B-206ENST00000616407 MTURNQ8N3F0 131 aa9.87□□□□□ -0.83
PPP4R3B-206ENST00000616407 RNF152Q8N8N0 203 aa9.87□□□□□ -0.83
PPP4R3B-206ENST00000616407 Q8N976 141 aa9.87□□□□□ -0.83
PPP4R3B-206ENST00000616407 C11orf68Q9H3H3 251 aaKnown RBP9.87□□□□□ -0.83
PPP4R3B-206ENST00000616407 A0A1W2PPM0 123 aa9.87□□□□□ -0.83
PPP4R3B-206ENST00000616407 CCL25O15444 150 aa9.87□□□□□ -0.83
PPP4R3B-206ENST00000616407 CST9LQ9H4G1 147 aa9.87□□□□□ -0.83
PPP4R3B-206ENST00000616407 NDUFA12Q9UI09 145 aa9.87□□□□□ -0.83
PPP4R3B-206ENST00000616407 RNASE3P12724 160 aaKnown RBP9.86□□□□□ -0.83
PPP4R3B-206ENST00000616407 DCANP1Q8TF63 244 aa9.86□□□□□ -0.83
PPP4R3B-206ENST00000616407 DEFB114Q30KQ6 69 aa9.86□□□□□ -0.83
PPP4R3B-206ENST00000616407 TMEM243Q9BU79 118 aa9.86□□□□□ -0.83
PPP4R3B-206ENST00000616407 MALP21145 153 aa9.86□□□□□ -0.83
PPP4R3B-206ENST00000616407 FXYD2P54710 66 aa9.86□□□□□ -0.83
PPP4R3B-206ENST00000616407 GAGE6Q13070 117 aa9.86□□□□□ -0.83
PPP4R3B-206ENST00000616407 C12orf74Q32Q52 190 aa9.86□□□□□ -0.83
PPP4R3B-206ENST00000616407 CFAP161Q6P656 301 aa9.86□□□□□ -0.83
PPP4R3B-206ENST00000616407 ODF3Q96PU9 254 aa9.86□□□□□ -0.83
PPP4R3B-206ENST00000616407 OPRPNQ99935 248 aaPredicted RBP9.86□□□□□ -0.83
PPP4R3B-206ENST00000616407 TRAV25A0A0B4J276 109 aa9.86□□□□□ -0.83
PPP4R3B-206ENST00000616407 CNFNQ9BYD5 112 aa9.86□□□□□ -0.83
PPP4R3B-206ENST00000616407 TAX1BP3O14907 124 aa9.85□□□□□ -0.83
PPP4R3B-206ENST00000616407 C11orf86A6NJI1 115 aa9.85□□□□□ -0.83
PPP4R3B-206ENST00000616407 DNAL4O96015 105 aa9.85□□□□□ -0.83
PPP4R3B-206ENST00000616407 SPINK8P0C7L1 97 aa9.85□□□□□ -0.83
PPP4R3B-206ENST00000616407 P0DMU3 169 aa9.85□□□□□ -0.83
PPP4R3B-206ENST00000616407 FAM231AP0DMU4 169 aa9.85□□□□□ -0.83
PPP4R3B-206ENST00000616407 FAM231CP0DMU5 169 aa9.85□□□□□ -0.83
PPP4R3B-206ENST00000616407 K7EP34 96 aa9.84□□□□□ -0.83
PPP4R3B-206ENST00000616407 NRACQ8N912 160 aa9.84□□□□□ -0.83
PPP4R3B-206ENST00000616407 MYO15AQ9UKN7 3530 aa9.84□□□□□ -0.83
PPP4R3B-206ENST00000616407 AMTNQ6UX39 209 aa9.84□□□□□ -0.83
PPP4R3B-206ENST00000616407 KLLNB2CW77 178 aa9.84□□□□□ -0.83
PPP4R3B-206ENST00000616407 TIMM17AQ99595 171 aa9.84□□□□□ -0.83
PPP4R3B-206ENST00000616407 FREM2Q5SZK8 3169 aa9.84□□□□□ -0.83
PPP4R3B-206ENST00000616407 C6orf226Q5I0X4 101 aa9.83□□□□□ -0.84
PPP4R3B-206ENST00000616407 COX8CQ7Z4L0 72 aa9.83□□□□□ -0.84
PPP4R3B-206ENST00000616407 OCIAD2Q56VL3 154 aa9.83□□□□□ -0.84
PPP4R3B-206ENST00000616407 A0A096LPF7 62 aa9.83□□□□□ -0.84
PPP4R3B-206ENST00000616407 C20orf203Q8NBC4 194 aa9.83□□□□□ -0.84
PPP4R3B-206ENST00000616407 K7EP13 123 aa9.82□□□□□ -0.84
PPP4R3B-206ENST00000616407 RNASE1P07998 156 aaKnown RBP9.82□□□□□ -0.84
PPP4R3B-206ENST00000616407 E9PLD3 99 aa9.82□□□□□ -0.84
PPP4R3B-206ENST00000616407 H3BMG7 143 aa9.82□□□□□ -0.84
PPP4R3B-206ENST00000616407 HIGD1BQ9P298 99 aa9.82□□□□□ -0.84
PPP4R3B-206ENST00000616407 IGKV2D-26A0A0A0MRZ7 120 aa9.82□□□□□ -0.84
PPP4R3B-206ENST00000616407 F5H768 121 aa9.82□□□□□ -0.84
PPP4R3B-206ENST00000616407 DAD1P61803 113 aa9.82□□□□□ -0.84
PPP4R3B-206ENST00000616407 SPANXA1Q9NS26 97 aa9.82□□□□□ -0.84
PPP4R3B-206ENST00000616407 IGHV4-4A0A075B6R2 117 aa9.81□□□□□ -0.84
PPP4R3B-206ENST00000616407 DNAJC30Q96LL9 226 aa9.81□□□□□ -0.84
PPP4R3B-206ENST00000616407 PRM2P04554 102 aa9.81□□□□□ -0.84
PPP4R3B-206ENST00000616407 ETDBQ3ZM63 59 aa9.81□□□□□ -0.84
PPP4R3B-206ENST00000616407 CEMP1Q6PRD7 247 aaPredicted RBP9.81□□□□□ -0.84
PPP4R3B-206ENST00000616407 C3orf56Q8N813 242 aa9.81□□□□□ -0.84
PPP4R3B-206ENST00000616407 CKS1BP61024 79 aa9.8□□□□□ -0.84
PPP4R3B-206ENST00000616407 PRO1854Q9UHT4 67 aa9.8□□□□□ -0.84
PPP4R3B-206ENST00000616407 BOD1L1Q8NFC6 3051 aa9.8□□□□□ -0.84
PPP4R3B-206ENST00000616407 PAX4O43316 350 aa9.8□□□□□ -0.84
PPP4R3B-206ENST00000616407 NBEAQ8NFP9 2946 aa9.8□□□□□ -0.84
PPP4R3B-206ENST00000616407 LEPROTO15243 131 aa9.79□□□□□ -0.84
PPP4R3B-206ENST00000616407 HERVK_113P63121 156 aa9.79□□□□□ -0.84
PPP4R3B-206ENST00000616407 C16orf74Q96GX8 76 aa9.79□□□□□ -0.84
PPP4R3B-206ENST00000616407 TRBV7-3A0A075B6L6 115 aa9.79□□□□□ -0.84
PPP4R3B-206ENST00000616407 K7EQD1 137 aa9.79□□□□□ -0.84
PPP4R3B-206ENST00000616407 M0QY20 66 aa9.79□□□□□ -0.84
PPP4R3B-206ENST00000616407 BRI3O95415 125 aa9.79□□□□□ -0.84
PPP4R3B-206ENST00000616407 SS18Q15532 418 aa9.79□□□□□ -0.84
PPP4R3B-206ENST00000616407 NEXN-AS1Q8NBZ9 246 aa9.79□□□□□ -0.84
PPP4R3B-206ENST00000616407 C9JAW5 83 aa9.79□□□□□ -0.84
PPP4R3B-206ENST00000616407 PROK1P58294 105 aa9.79□□□□□ -0.84
PPP4R3B-206ENST00000616407 IGLL5B9A064 214 aa9.78□□□□□ -0.84
PPP4R3B-206ENST00000616407 SOCS3O14543 225 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms