RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, human

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-223	ENST00000616179	TIMM17A	Q99595	171 aa		11.8	□□□□□ -0.52
SYNRG-223	ENST00000616179		I3L3M4	83 aa		11.8	□□□□□ -0.52
SYNRG-223	ENST00000616179	SAA4	P35542	130 aa		11.8	□□□□□ -0.52
SYNRG-223	ENST00000616179	DEFB123	Q8N688	67 aa		11.8	□□□□□ -0.52
SYNRG-223	ENST00000616179		H3BT86	120 aa		11.79	□□□□□ -0.52
SYNRG-223	ENST00000616179	UNQ9165/PRO28630	Q6UXU0	137 aa		11.79	□□□□□ -0.52
SYNRG-223	ENST00000616179	ATRX	P46100	2492 aa		11.79	□□□□□ -0.52
SYNRG-223	ENST00000616179	BRD3OS	Q6XYD6	125 aa		11.79	□□□□□ -0.52
SYNRG-223	ENST00000616179	PTPRQ	Q9UMZ3	2332 aa		11.79	□□□□□ -0.52
SYNRG-223	ENST00000616179	PCSK5	Q92824	1860 aa		11.79	□□□□□ -0.52
SYNRG-223	ENST00000616179	TRAC	P01848	142 aa		11.79	□□□□□ -0.52
SYNRG-223	ENST00000616179	LOC400499	M0QZD8	3231 aa		11.78	□□□□□ -0.52
SYNRG-223	ENST00000616179	PRRC2A	P48634	2157 aa	Known RBP	11.78	□□□□□ -0.52
SYNRG-223	ENST00000616179	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	11.78	□□□□□ -0.52
SYNRG-223	ENST00000616179	IGKV2-29	A2NJV5	120 aa	Predicted RBP	11.78	□□□□□ -0.52
SYNRG-223	ENST00000616179	CCL21	O00585	134 aa		11.78	□□□□□ -0.52
SYNRG-223	ENST00000616179	DMXL2	Q8TDJ6	3036 aa		11.78	□□□□□ -0.52
SYNRG-223	ENST00000616179	ASPM	Q8IZT6	3477 aa		11.78	□□□□□ -0.52
SYNRG-223	ENST00000616179	IGHV3-16	A0A0C4DH30	117 aa		11.78	□□□□□ -0.52
SYNRG-223	ENST00000616179		P0DMU3	169 aa		11.78	□□□□□ -0.52
SYNRG-223	ENST00000616179	FAM231A	P0DMU4	169 aa		11.78	□□□□□ -0.52
SYNRG-223	ENST00000616179	FAM231C	P0DMU5	169 aa		11.78	□□□□□ -0.52
SYNRG-223	ENST00000616179	TECTA	O75443	2155 aa		11.78	□□□□□ -0.52
SYNRG-223	ENST00000616179	hADV29S1	A0JD25	119 aa		11.78	□□□□□ -0.52
SYNRG-223	ENST00000616179	TRBV12-3	P01733	135 aa		11.78	□□□□□ -0.52
SYNRG-223	ENST00000616179	PRIMA1	Q86XR5	153 aa		11.78	□□□□□ -0.52
SYNRG-223	ENST00000616179	CCDC140	Q96MF4	163 aa		11.78	□□□□□ -0.52
SYNRG-223	ENST00000616179		J3KT08	172 aa		11.77	□□□□□ -0.52
SYNRG-223	ENST00000616179		Q8N9W7	124 aa		11.77	□□□□□ -0.52
SYNRG-223	ENST00000616179	MDFIC	Q9P1T7	246 aa		11.77	□□□□□ -0.52
SYNRG-223	ENST00000616179	TSHB	P01222	138 aa		11.77	□□□□□ -0.53
SYNRG-223	ENST00000616179	ZFAND2A	Q8N6M9	145 aa		11.77	□□□□□ -0.53
SYNRG-223	ENST00000616179	ZFAND3	Q9H8U3	227 aa		11.77	□□□□□ -0.53
SYNRG-223	ENST00000616179	CLPSL1	A2RUU4	121 aa		11.76	□□□□□ -0.53
SYNRG-223	ENST00000616179	SNRPD3	P62318	126 aa	Known RBP	11.76	□□□□□ -0.53
SYNRG-223	ENST00000616179		Q9HAA7	133 aa		11.76	□□□□□ -0.53
SYNRG-223	ENST00000616179	TMEM223	A0PJW6	202 aa		11.76	□□□□□ -0.53
SYNRG-223	ENST00000616179	IGIP	A6NJ69	53 aa		11.76	□□□□□ -0.53
SYNRG-223	ENST00000616179	ADGRG4	Q8IZF6	3080 aa		11.76	□□□□□ -0.53
SYNRG-223	ENST00000616179		A0A1B0GX51	115 aa		11.76	□□□□□ -0.53
SYNRG-223	ENST00000616179	C19orf54	Q5BKX5	351 aa		11.76	□□□□□ -0.53
SYNRG-223	ENST00000616179	TINCR	A0A1B0GVN0	87 aa		11.76	□□□□□ -0.53
SYNRG-223	ENST00000616179	NDUFA7	O95182	113 aa		11.76	□□□□□ -0.53
SYNRG-223	ENST00000616179	PTPN13	Q12923	2485 aa		11.75	□□□□□ -0.53
SYNRG-223	ENST00000616179	LINC01546	A6NGU7	62 aa		11.75	□□□□□ -0.53
SYNRG-223	ENST00000616179	GRN	P28799	593 aa	Known RBP	11.75	□□□□□ -0.53
SYNRG-223	ENST00000616179	ZFHX4	Q86UP3	3567 aa		11.75	□□□□□ -0.53
SYNRG-223	ENST00000616179	TRBV30	A0A0K0K1B3	111 aa		11.75	□□□□□ -0.53
SYNRG-223	ENST00000616179	COX8C	Q7Z4L0	72 aa		11.75	□□□□□ -0.53
SYNRG-223	ENST00000616179	C3orf22	Q8N5N4	141 aa		11.75	□□□□□ -0.53
SYNRG-223	ENST00000616179	NXPH4	O95158	308 aa		11.75	□□□□□ -0.53
SYNRG-223	ENST00000616179	MINOS1	Q5TGZ0	78 aa		11.75	□□□□□ -0.53
SYNRG-223	ENST00000616179		Q9H8V8	135 aa		11.75	□□□□□ -0.53
SYNRG-223	ENST00000616179	RNASE3	P12724	160 aa	Known RBP	11.74	□□□□□ -0.53
SYNRG-223	ENST00000616179		Q6Q795	121 aa		11.74	□□□□□ -0.53
SYNRG-223	ENST00000616179	CEP295	Q9C0D2	2601 aa		11.74	□□□□□ -0.53
SYNRG-223	ENST00000616179	SDIM1	Q6ZPB5	146 aa		11.74	□□□□□ -0.53
SYNRG-223	ENST00000616179	NSUN5P1	Q3KNT7	163 aa		11.74	□□□□□ -0.53
SYNRG-223	ENST00000616179	LY6L	H3BQJ8	138 aa		11.73	□□□□□ -0.53
SYNRG-223	ENST00000616179	MYO9A	B2RTY4	2548 aa		11.73	□□□□□ -0.53
SYNRG-223	ENST00000616179	DAZ2	Q13117	558 aa	Known RBP	11.73	□□□□□ -0.53
SYNRG-223	ENST00000616179	DAZ4	Q86SG3	579 aa	Known RBP	11.73	□□□□□ -0.53
SYNRG-223	ENST00000616179	GPHB5	Q86YW7	130 aa		11.73	□□□□□ -0.53
SYNRG-223	ENST00000616179	MRPL53	Q96EL3	112 aa	Known RBP	11.73	□□□□□ -0.53
SYNRG-223	ENST00000616179	DAZ1	Q9NQZ3	744 aa	Known RBP	11.73	□□□□□ -0.53
SYNRG-223	ENST00000616179	DAZ3	Q9NR90	486 aa	Known RBP	11.73	□□□□□ -0.53
SYNRG-223	ENST00000616179	C20orf203	Q8NBC4	194 aa		11.73	□□□□□ -0.53
SYNRG-223	ENST00000616179	UQCRQ	O14949	82 aa		11.72	□□□□□ -0.53
SYNRG-223	ENST00000616179	PSMG3-AS1	Q96PY0	264 aa		11.72	□□□□□ -0.53
SYNRG-223	ENST00000616179	LENEP	Q9Y5L5	61 aa		11.72	□□□□□ -0.53
SYNRG-223	ENST00000616179	ADAMTSL4-AS1	Q5T5F5	129 aa		11.72	□□□□□ -0.53
SYNRG-223	ENST00000616179	MINOS1-NBL1	R4GNA1	71 aa		11.72	□□□□□ -0.53
SYNRG-223	ENST00000616179	C5orf47	Q569G3	176 aa		11.71	□□□□□ -0.53
SYNRG-223	ENST00000616179	PEMT	Q9UBM1	199 aa		11.71	□□□□□ -0.53
SYNRG-223	ENST00000616179	IGHV4-4	A0A075B6R2	117 aa		11.71	□□□□□ -0.53
SYNRG-223	ENST00000616179	SBSPON	Q8IVN8	264 aa		11.71	□□□□□ -0.53
SYNRG-223	ENST00000616179	POLR2K	P53803	58 aa	Known RBP	11.71	□□□□□ -0.54
SYNRG-223	ENST00000616179	LINC00643	Q86TS7	51 aa		11.71	□□□□□ -0.54
SYNRG-223	ENST00000616179	LINC00158	P58513	81 aa		11.7	□□□□□ -0.54
SYNRG-223	ENST00000616179	IGFL2	Q6UWQ7	119 aa		11.7	□□□□□ -0.54
SYNRG-223	ENST00000616179	C11orf68	Q9H3H3	251 aa	Known RBP	11.7	□□□□□ -0.54
SYNRG-223	ENST00000616179	IGLV4-3	A0A075B6K6	122 aa		11.7	□□□□□ -0.54
SYNRG-223	ENST00000616179	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	11.7	□□□□□ -0.54
SYNRG-223	ENST00000616179	SETD2	Q9BYW2	2564 aa	Predicted RBP	11.7	□□□□□ -0.54
SYNRG-223	ENST00000616179	SON	P18583	2426 aa	Known RBP	11.69	□□□□□ -0.54
SYNRG-223	ENST00000616179	CRP	P02741	224 aa		11.69	□□□□□ -0.54
SYNRG-223	ENST00000616179	ACYP1	P07311	99 aa		11.69	□□□□□ -0.54
SYNRG-223	ENST00000616179	INAFM2	P0DMQ5	153 aa		11.69	□□□□□ -0.54
SYNRG-223	ENST00000616179	ANKRD11	Q6UB99	2663 aa	Predicted RBP	11.69	□□□□□ -0.54
SYNRG-223	ENST00000616179	MIA	Q16674	131 aa		11.69	□□□□□ -0.54
SYNRG-223	ENST00000616179	IGHV1OR15-1	A0A075B7D0	117 aa		11.69	□□□□□ -0.54
SYNRG-223	ENST00000616179	IGHV1-58	A0A0C4DH39	117 aa		11.69	□□□□□ -0.54
SYNRG-223	ENST00000616179	TNFRSF13B	O14836	293 aa	Predicted RBP	11.69	□□□□□ -0.54
SYNRG-223	ENST00000616179	CSDC2	Q9Y534	153 aa	Known RBP	11.69	□□□□□ -0.54
SYNRG-223	ENST00000616179	OTOGL	Q3ZCN5	2332 aa		11.68	□□□□□ -0.54
SYNRG-223	ENST00000616179	LST1	O00453	97 aa		11.68	□□□□□ -0.54
SYNRG-223	ENST00000616179	COPS9	Q8WXC6	57 aa		11.68	□□□□□ -0.54
SYNRG-223	ENST00000616179	IGHV3-53	P01767	116 aa		11.68	□□□□□ -0.54
SYNRG-223	ENST00000616179	LINC01587	Q99440	93 aa		11.68	□□□□□ -0.54
SYNRG-223	ENST00000616179	PROK1	P58294	105 aa		11.67	□□□□□ -0.54

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