RNA–Protein interactions for RNA: ENST00000613943.4

SMARCD2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5 BASIC

Gene SMARCD2, Length 2,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-212ENST00000613943 H3BRM9 83 aa14.5□□□□□ -0.09
SMARCD2-212ENST00000613943 Q9UF83 564 aa14.5□□□□□ -0.09
SMARCD2-212ENST00000613943 C9orf118A6NHY6 69 aa14.49□□□□□ -0.09
SMARCD2-212ENST00000613943 HIGD1BQ9P298 99 aa14.49□□□□□ -0.09
SMARCD2-212ENST00000613943 NOTCH3Q9UM47 2321 aa14.49□□□□□ -0.09
SMARCD2-212ENST00000613943 ANK3Q12955 4377 aaKnown RBP14.49□□□□□ -0.09
SMARCD2-212ENST00000613943 TRBV27A0A0K0K1C4 114 aa14.49□□□□□ -0.09
SMARCD2-212ENST00000613943 RAX2Q96IS3 184 aa14.49□□□□□ -0.09
SMARCD2-212ENST00000613943 IGLV4-69A0A075B6H9 119 aa14.48□□□□□ -0.09
SMARCD2-212ENST00000613943 TRGV11A0A075B6L2 103 aa14.48□□□□□ -0.09
SMARCD2-212ENST00000613943 C11orf86A6NJI1 115 aa14.48□□□□□ -0.09
SMARCD2-212ENST00000613943 OR11H12B2RN74 326 aa14.48□□□□□ -0.09
SMARCD2-212ENST00000613943 DEFB114Q30KQ6 69 aa14.48□□□□□ -0.09
SMARCD2-212ENST00000613943 OR11H2Q8NH07 326 aa14.48□□□□□ -0.09
SMARCD2-212ENST00000613943 CD28P10747 220 aa14.48□□□□□ -0.09
SMARCD2-212ENST00000613943 PRADC1Q9BSG0 188 aa14.48□□□□□ -0.09
SMARCD2-212ENST00000613943 NHP2Q9NX24 153 aaKnown RBP14.48□□□□□ -0.09
SMARCD2-212ENST00000613943 JMJD1CQ15652 2540 aa14.47□□□□□ -0.09
SMARCD2-212ENST00000613943 RPL32P62910 135 aaKnown RBP14.47□□□□□ -0.09
SMARCD2-212ENST00000613943 TRBV6-5A0A0K0K1A5 114 aa14.47□□□□□ -0.09
SMARCD2-212ENST00000613943 CEND1Q8N111 149 aa14.46□□□□□ -0.09
SMARCD2-212ENST00000613943 MYMXA0A1B0GTQ4 84 aa14.45□□□□□ -0.1
SMARCD2-212ENST00000613943 GAGE10A6NGK3 116 aa14.45□□□□□ -0.1
SMARCD2-212ENST00000613943 TRPT1Q86TN4 253 aaKnown RBP14.45□□□□□ -0.1
SMARCD2-212ENST00000613943 CST9LQ9H4G1 147 aa14.45□□□□□ -0.1
SMARCD2-212ENST00000613943 Q6ZSN1 163 aa14.44□□□□□ -0.1
SMARCD2-212ENST00000613943 HIST1H4GQ99525 98 aa14.44□□□□□ -0.1
SMARCD2-212ENST00000613943 SPAG8Q99932 426 aaPredicted RBP14.44□□□□□ -0.1
SMARCD2-212ENST00000613943 SMIM13P0DJ93 91 aa14.43□□□□□ -0.1
SMARCD2-212ENST00000613943 RIPPLY3P57055 190 aa14.43□□□□□ -0.1
SMARCD2-212ENST00000613943 KRTAP1-1Q07627 177 aa14.43□□□□□ -0.1
SMARCD2-212ENST00000613943 PMVKQ15126 192 aa14.43□□□□□ -0.1
SMARCD2-212ENST00000613943 ZNRF2Q8NHG8 242 aa14.43□□□□□ -0.1
SMARCD2-212ENST00000613943 PLEKHB2Q96CS7 222 aa14.43□□□□□ -0.1
SMARCD2-212ENST00000613943 LINC01587Q99440 93 aa14.43□□□□□ -0.1
SMARCD2-212ENST00000613943 IGHV3OR16-12A0A075B7B8 117 aa14.43□□□□□ -0.1
SMARCD2-212ENST00000613943 E9PLD3 99 aa14.43□□□□□ -0.1
SMARCD2-212ENST00000613943 CITED2Q99967 270 aaPredicted RBP14.43□□□□□ -0.1
SMARCD2-212ENST00000613943 XCL2Q9UBD3 114 aa14.43□□□□□ -0.1
SMARCD2-212ENST00000613943 UNC79Q9P2D8 2635 aa14.42□□□□□ -0.1
SMARCD2-212ENST00000613943 ODF3L2Q3SX64 289 aa14.42□□□□□ -0.1
SMARCD2-212ENST00000613943 YAE1D1Q9NRH1 226 aa14.42□□□□□ -0.1
SMARCD2-212ENST00000613943 GAGE12BA1L429 117 aa14.42□□□□□ -0.1
SMARCD2-212ENST00000613943 TM2D2Q9BX73 214 aa14.42□□□□□ -0.1
SMARCD2-212ENST00000613943 MRPL16Q9NX20 251 aaKnown RBP14.42□□□□□ -0.1
SMARCD2-212ENST00000613943 SETXQ7Z333 2677 aaKnown RBP14.41□□□□□ -0.1
SMARCD2-212ENST00000613943 ZNF815PA8K554 130 aa14.41□□□□□ -0.1
SMARCD2-212ENST00000613943 A8MTW9 85 aa14.41□□□□□ -0.1
SMARCD2-212ENST00000613943 TMEM170BQ5T4T1 132 aa14.41□□□□□ -0.1
SMARCD2-212ENST00000613943 TMEM86BQ8N661 226 aa14.41□□□□□ -0.1
SMARCD2-212ENST00000613943 TIMM17AQ99595 171 aa14.41□□□□□ -0.1
SMARCD2-212ENST00000613943 FASNP49327 2511 aaKnown RBP14.41□□□□□ -0.1
SMARCD2-212ENST00000613943 A0A1W2PPM0 123 aa14.41□□□□□ -0.1
SMARCD2-212ENST00000613943 CCL24O00175 119 aa14.41□□□□□ -0.1
SMARCD2-212ENST00000613943 PHLDA1Q8WV24 401 aaPredicted RBP14.41□□□□□ -0.1
SMARCD2-212ENST00000613943 I3L3M4 83 aa14.4□□□□□ -0.11
SMARCD2-212ENST00000613943 TSPEAR-AS2P59090 65 aa14.4□□□□□ -0.11
SMARCD2-212ENST00000613943 UFSP1Q6NVU6 142 aa14.4□□□□□ -0.11
SMARCD2-212ENST00000613943 CEMP1Q6PRD7 247 aaPredicted RBP14.4□□□□□ -0.11
SMARCD2-212ENST00000613943 TMEM141Q96I45 108 aa14.4□□□□□ -0.11
SMARCD2-212ENST00000613943 NACAE9PAV3 2078 aa14.39□□□□□ -0.11
SMARCD2-212ENST00000613943 AZU1P20160 251 aa14.39□□□□□ -0.11
SMARCD2-212ENST00000613943 SCGB2A2Q13296 93 aa14.39□□□□□ -0.11
SMARCD2-212ENST00000613943 NSUN5P1Q3KNT7 163 aa14.39□□□□□ -0.11
SMARCD2-212ENST00000613943 SAMD5Q5TGI4 173 aa14.39□□□□□ -0.11
SMARCD2-212ENST00000613943 TRBV7-3A0A075B6L6 115 aa14.38□□□□□ -0.11
SMARCD2-212ENST00000613943 M0R2P5 195 aa14.38□□□□□ -0.11
SMARCD2-212ENST00000613943 SCGB1D4Q6XE38 83 aa14.38□□□□□ -0.11
SMARCD2-212ENST00000613943 SPCS1Q9Y6A9 102 aa14.38□□□□□ -0.11
SMARCD2-212ENST00000613943 TRAV2A0A0B4J234 112 aa14.38□□□□□ -0.11
SMARCD2-212ENST00000613943 K7EP34 96 aa14.38□□□□□ -0.11
SMARCD2-212ENST00000613943 RNASE13Q5GAN3 156 aaKnown RBP14.38□□□□□ -0.11
SMARCD2-212ENST00000613943 C20orf203Q8NBC4 194 aa14.38□□□□□ -0.11
SMARCD2-212ENST00000613943 C11orf72Q8NBR9 251 aa14.38□□□□□ -0.11
SMARCD2-212ENST00000613943 IGHV3-64A0A075B6Q5 118 aa14.37□□□□□ -0.11
SMARCD2-212ENST00000613943 ZNF415Q09FC8 603 aa14.37□□□□□ -0.11
SMARCD2-212ENST00000613943 CFAP126Q5VTH2 177 aa14.37□□□□□ -0.11
SMARCD2-212ENST00000613943 LINC01006Q8NI28 216 aa14.37□□□□□ -0.11
SMARCD2-212ENST00000613943 IGHV3-38A0A0C4DH36 116 aa14.36□□□□□ -0.11
SMARCD2-212ENST00000613943 PLA2G2AP14555 144 aa14.36□□□□□ -0.11
SMARCD2-212ENST00000613943 FHL3Q13643 280 aa14.36□□□□□ -0.11
SMARCD2-212ENST00000613943 RHOHQ15669 191 aa14.36□□□□□ -0.11
SMARCD2-212ENST00000613943 SMR3AQ99954 134 aa14.36□□□□□ -0.11
SMARCD2-212ENST00000613943 INSP01308 110 aa14.36□□□□□ -0.11
SMARCD2-212ENST00000613943 GTF2H5Q6ZYL4 71 aa14.36□□□□□ -0.11
SMARCD2-212ENST00000613943 WFDC10AQ9H1F0 79 aa14.36□□□□□ -0.11
SMARCD2-212ENST00000613943 NOTCH2Q04721 2471 aa14.35□□□□□ -0.11
SMARCD2-212ENST00000613943 HECTD1Q9ULT8 2610 aa14.35□□□□□ -0.11
SMARCD2-212ENST00000613943 RNF151Q2KHN1 245 aa14.35□□□□□ -0.11
SMARCD2-212ENST00000613943 C12orf74Q32Q52 190 aa14.35□□□□□ -0.11
SMARCD2-212ENST00000613943 STHQ8IWL8 128 aa14.35□□□□□ -0.11
SMARCD2-212ENST00000613943 FABP2P12104 132 aa14.34□□□□□ -0.11
SMARCD2-212ENST00000613943 RBX1P62877 108 aa14.34□□□□□ -0.11
SMARCD2-212ENST00000613943 TNFRSF18Q9Y5U5 241 aa14.34□□□□□ -0.11
SMARCD2-212ENST00000613943 IGLV4-3A0A075B6K6 122 aa14.33□□□□□ -0.11
SMARCD2-212ENST00000613943 A8MWV9 139 aa14.33□□□□□ -0.12
SMARCD2-212ENST00000613943 A0A0J9YXV3 536 aa14.32□□□□□ -0.12
SMARCD2-212ENST00000613943 C1orf158Q8N1D5 194 aa14.32□□□□□ -0.12
SMARCD2-212ENST00000613943 TAL2Q16559 108 aa14.32□□□□□ -0.12
SMARCD2-212ENST00000613943 FAM104AQ969W3 186 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 163.2 ms