RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 LCE2BO14633 110 aa11.59□□□□□ -0.55
SSBP1-215ENST00000612337 ZNF56Q15929 161 aa11.59□□□□□ -0.55
SSBP1-215ENST00000612337 C14orf177Q52M58 125 aa11.59□□□□□ -0.55
SSBP1-215ENST00000612337 C4orf48Q5BLP8 95 aa11.59□□□□□ -0.55
SSBP1-215ENST00000612337 ENHOQ6UWT2 76 aa11.59□□□□□ -0.55
SSBP1-215ENST00000612337 SSBP4Q9BWG4 385 aaPredicted RBP11.59□□□□□ -0.55
SSBP1-215ENST00000612337 TRAV1-1A0A0B4J248 108 aa11.58□□□□□ -0.56
SSBP1-215ENST00000612337 SNAI2O43623 268 aa11.58□□□□□ -0.56
SSBP1-215ENST00000612337 CRPP02741 224 aa11.58□□□□□ -0.56
SSBP1-215ENST00000612337 RAB5CP51148 216 aa11.58□□□□□ -0.56
SSBP1-215ENST00000612337 CCL20P78556 96 aa11.58□□□□□ -0.56
SSBP1-215ENST00000612337 EIF5AL1Q6IS14 154 aaKnown RBP11.58□□□□□ -0.56
SSBP1-215ENST00000612337 BAGE2Q86Y30 109 aa11.58□□□□□ -0.56
SSBP1-215ENST00000612337 C15orf54Q8N8G6 183 aa11.58□□□□□ -0.56
SSBP1-215ENST00000612337 CIRBP-AS1Q8TBR5 109 aa11.58□□□□□ -0.56
SSBP1-215ENST00000612337 OR5AL1P0C617 328 aa11.57□□□□□ -0.56
SSBP1-215ENST00000612337 PKIAP61925 76 aa11.57□□□□□ -0.56
SSBP1-215ENST00000612337 MPV17L2Q567V2 206 aa11.57□□□□□ -0.56
SSBP1-215ENST00000612337 Q6ZNX1 250 aa11.57□□□□□ -0.56
SSBP1-215ENST00000612337 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.57□□□□□ -0.56
SSBP1-215ENST00000612337 KRTAP10-4P60372 401 aaPredicted RBP11.56□□□□□ -0.56
SSBP1-215ENST00000612337 SPANXN1Q5VSR9 72 aa11.56□□□□□ -0.56
SSBP1-215ENST00000612337 MANBALQ9NQG1 85 aa11.56□□□□□ -0.56
SSBP1-215ENST00000612337 ANGP03950 147 aaKnown RBP11.55□□□□□ -0.56
SSBP1-215ENST00000612337 SULT1A2P50226 295 aa11.55□□□□□ -0.56
SSBP1-215ENST00000612337 CHCHD5Q9BSY4 110 aa11.55□□□□□ -0.56
SSBP1-215ENST00000612337 GNG13Q9P2W3 67 aa11.55□□□□□ -0.56
SSBP1-215ENST00000612337 VAX2Q9UIW0 290 aa11.55□□□□□ -0.56
SSBP1-215ENST00000612337 MUC21A0A0G2JKD1 596 aa11.54□□□□□ -0.56
SSBP1-215ENST00000612337 MUC21A0A140T8X8 626 aa11.54□□□□□ -0.56
SSBP1-215ENST00000612337 F5H697 171 aa11.54□□□□□ -0.56
SSBP1-215ENST00000612337 IGLV2-8P01709 118 aa11.54□□□□□ -0.56
SSBP1-215ENST00000612337 RPL35P42766 123 aaKnown RBP11.54□□□□□ -0.56
SSBP1-215ENST00000612337 MIAQ16674 131 aa11.54□□□□□ -0.56
SSBP1-215ENST00000612337 TMEM97Q5BJF2 176 aa11.54□□□□□ -0.56
SSBP1-215ENST00000612337 TEX46H3BTG2 121 aa11.53□□□□□ -0.56
SSBP1-215ENST00000612337 SLC51BQ86UW2 128 aa11.53□□□□□ -0.56
SSBP1-215ENST00000612337 C11orf52Q96A22 123 aa11.53□□□□□ -0.56
SSBP1-215ENST00000612337 KIF25-AS1Q9Y6Z4 181 aa11.53□□□□□ -0.56
SSBP1-215ENST00000612337 USP17L23D6RBM5 183 aa11.52□□□□□ -0.57
SSBP1-215ENST00000612337 SMIM17P0DL12 118 aa11.52□□□□□ -0.57
SSBP1-215ENST00000612337 NTM-AS1Q6ZSK4 140 aa11.52□□□□□ -0.57
SSBP1-215ENST00000612337 AP1S3Q96PC3 154 aa11.52□□□□□ -0.57
SSBP1-215ENST00000612337 PRR34Q9NV39 138 aa11.52□□□□□ -0.57
SSBP1-215ENST00000612337 HLA-DQA1P01909 254 aa11.51□□□□□ -0.57
SSBP1-215ENST00000612337 SSTP61278 116 aa11.51□□□□□ -0.57
SSBP1-215ENST00000612337 DERL1Q9BUN8 251 aa11.51□□□□□ -0.57
SSBP1-215ENST00000612337 RBX1P62877 108 aa11.5□□□□□ -0.57
SSBP1-215ENST00000612337 TRBV25-1A0A075B6N4 114 aa11.49□□□□□ -0.57
SSBP1-215ENST00000612337 OXTP01178 125 aa11.49□□□□□ -0.57
SSBP1-215ENST00000612337 PRSS1P07477 247 aa11.49□□□□□ -0.57
SSBP1-215ENST00000612337 GAGE6Q13070 117 aa11.49□□□□□ -0.57
SSBP1-215ENST00000612337 DGAT2L7PQ6IED9 249 aa11.49□□□□□ -0.57
SSBP1-215ENST00000612337 AKAP14Q86UN6 197 aa11.49□□□□□ -0.57
SSBP1-215ENST00000612337 MEF2BQ02080 365 aaPredicted RBP11.48□□□□□ -0.57
SSBP1-215ENST00000612337 IQCJQ1A5X6 159 aa11.48□□□□□ -0.57
SSBP1-215ENST00000612337 CENPWQ5EE01 88 aa11.48□□□□□ -0.57
SSBP1-215ENST00000612337 KRTAP26-1Q6PEX3 210 aa11.48□□□□□ -0.57
SSBP1-215ENST00000612337 LINC00269Q8N2A0 174 aa11.48□□□□□ -0.57
SSBP1-215ENST00000612337 M0QY20 66 aa11.47□□□□□ -0.57
SSBP1-215ENST00000612337 PDE6DO43924 150 aa11.47□□□□□ -0.57
SSBP1-215ENST00000612337 IFNA1P01562 189 aa11.47□□□□□ -0.57
SSBP1-215ENST00000612337 IGLC6P0CF74 106 aa11.47□□□□□ -0.57
SSBP1-215ENST00000612337 CLPSL2Q6UWE3 100 aa11.47□□□□□ -0.57
SSBP1-215ENST00000612337 C9orf62Q8N4C0 152 aa11.47□□□□□ -0.57
SSBP1-215ENST00000612337 C9orf163Q8N9P6 203 aa11.47□□□□□ -0.57
SSBP1-215ENST00000612337 hCG_2014768A0A024R1R8 64 aa11.46□□□□□ -0.57
SSBP1-215ENST00000612337 IGHV1-24A0A0C4DH33 117 aa11.46□□□□□ -0.57
SSBP1-215ENST00000612337 RAB19A4D1S5 217 aa11.46□□□□□ -0.57
SSBP1-215ENST00000612337 GZMBP10144 247 aa11.46□□□□□ -0.57
SSBP1-215ENST00000612337 SERTAD4-AS1Q5TG53 156 aa11.46□□□□□ -0.57
SSBP1-215ENST00000612337 UBR4Q5T4S7 5183 aa11.46□□□□□ -0.58
SSBP1-215ENST00000612337 H7C1H1 209 aa11.45□□□□□ -0.58
SSBP1-215ENST00000612337 MGPP08493 103 aa11.45□□□□□ -0.58
SSBP1-215ENST00000612337 BCL2P10415 239 aa11.45□□□□□ -0.58
SSBP1-215ENST00000612337 GNG4P50150 75 aa11.45□□□□□ -0.58
SSBP1-215ENST00000612337 RPS20P60866 119 aaKnown RBP11.45□□□□□ -0.58
SSBP1-215ENST00000612337 RPL37AP61513 92 aaKnown RBP11.45□□□□□ -0.58
SSBP1-215ENST00000612337 SUMO4Q6EEV6 95 aa11.45□□□□□ -0.58
SSBP1-215ENST00000612337 FER1L6-AS1Q8NA97 138 aa11.45□□□□□ -0.58
SSBP1-215ENST00000612337 SMIM12Q96EX1 92 aa11.45□□□□□ -0.58
SSBP1-215ENST00000612337 TPPP3Q9BW30 176 aa11.45□□□□□ -0.58
SSBP1-215ENST00000612337 MED9Q9NWA0 146 aa11.45□□□□□ -0.58
SSBP1-215ENST00000612337 CACNG7P62955 275 aa11.44□□□□□ -0.58
SSBP1-215ENST00000612337 CLRN3Q8NCR9 226 aa11.44□□□□□ -0.58
SSBP1-215ENST00000612337 OR2D3Q8NGH3 330 aa11.44□□□□□ -0.58
SSBP1-215ENST00000612337 DAZAP1Q96EP5 407 aaKnown RBP11.44□□□□□ -0.58
SSBP1-215ENST00000612337 C19orf71A6NCJ1 209 aa11.43□□□□□ -0.58
SSBP1-215ENST00000612337 TAGLN2P37802 199 aaKnown RBP11.43□□□□□ -0.58
SSBP1-215ENST00000612337 REG3AQ06141 175 aa11.43□□□□□ -0.58
SSBP1-215ENST00000612337 TRBV20OR9-2A0A075B6H5 130 aa11.42□□□□□ -0.58
SSBP1-215ENST00000612337 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.42□□□□□ -0.58
SSBP1-215ENST00000612337 IGLV10-54A0A075B6I4 117 aa11.41□□□□□ -0.58
SSBP1-215ENST00000612337 TRAV8-4A0A0B4J246 113 aa11.41□□□□□ -0.58
SSBP1-215ENST00000612337 A0A1B0GUV1 79 aa11.41□□□□□ -0.58
SSBP1-215ENST00000612337 XKRY2A2RUG3 117 aa11.41□□□□□ -0.58
SSBP1-215ENST00000612337 F2Z2F3 143 aa11.41□□□□□ -0.58
SSBP1-215ENST00000612337 P01737 135 aa11.41□□□□□ -0.58
SSBP1-215ENST00000612337 NKX2-5P52952 324 aaPredicted RBP11.41□□□□□ -0.58
SSBP1-215ENST00000612337 RASL11AQ6T310 242 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms