RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 RIPPLY3P57055 190 aa20.5■□□□□ 0.87
CSPG5-205ENST00000610462 SEC11AP67812 179 aa20.5■□□□□ 0.87
CSPG5-205ENST00000610462 M0R2P5 195 aa20.49■□□□□ 0.87
CSPG5-205ENST00000610462 PIK3CD-AS1Q5SR53 167 aa20.49■□□□□ 0.87
CSPG5-205ENST00000610462 LINC01587Q99440 93 aa20.49■□□□□ 0.87
CSPG5-205ENST00000610462 PRM2P04554 102 aa20.49■□□□□ 0.87
CSPG5-205ENST00000610462 PTH2Q96A98 100 aa20.49■□□□□ 0.87
CSPG5-205ENST00000610462 NDUFA7O95182 113 aa20.48■□□□□ 0.87
CSPG5-205ENST00000610462 EDA2RQ9HAV5 297 aa20.48■□□□□ 0.87
CSPG5-205ENST00000610462 NF1P21359 2839 aa20.48■□□□□ 0.87
CSPG5-205ENST00000610462 OR4C5Q8NGB2 326 aa20.47■□□□□ 0.87
CSPG5-205ENST00000610462 IGIPA6NJ69 53 aa20.47■□□□□ 0.87
CSPG5-205ENST00000610462 OR11H12B2RN74 326 aa20.47■□□□□ 0.87
CSPG5-205ENST00000610462 HSD52Q0P140 79 aa20.47■□□□□ 0.87
CSPG5-205ENST00000610462 STHQ8IWL8 128 aa20.47■□□□□ 0.87
CSPG5-205ENST00000610462 DEFB104AQ8WTQ1 72 aa20.47■□□□□ 0.87
CSPG5-205ENST00000610462 SMR3AQ99954 134 aa20.47■□□□□ 0.87
CSPG5-205ENST00000610462 PRSS29PA6NIE9 313 aa20.46■□□□□ 0.87
CSPG5-205ENST00000610462 CUBNO60494 3623 aa20.46■□□□□ 0.87
CSPG5-205ENST00000610462 A8MWV9 139 aa20.46■□□□□ 0.87
CSPG5-205ENST00000610462 C11orf72Q8NBR9 251 aa20.45■□□□□ 0.86
CSPG5-205ENST00000610462 TMEM141Q96I45 108 aa20.45■□□□□ 0.86
CSPG5-205ENST00000610462 WNK1Q9H4A3 2382 aa20.45■□□□□ 0.86
CSPG5-205ENST00000610462 TSHBP01222 138 aa20.44■□□□□ 0.86
CSPG5-205ENST00000610462 RPL39P62891 51 aaKnown RBP20.44■□□□□ 0.86
CSPG5-205ENST00000610462 RHOHQ15669 191 aa20.44■□□□□ 0.86
CSPG5-205ENST00000610462 TTTY13Q9BZ97 58 aa20.44■□□□□ 0.86
CSPG5-205ENST00000610462 TIMM17AQ99595 171 aa20.44■□□□□ 0.86
CSPG5-205ENST00000610462 HIGD1BQ9P298 99 aa20.44■□□□□ 0.86
CSPG5-205ENST00000610462 NSUN5P1Q3KNT7 163 aa20.43■□□□□ 0.86
CSPG5-205ENST00000610462 UFSP1Q6NVU6 142 aa20.43■□□□□ 0.86
CSPG5-205ENST00000610462 PROK1P58294 105 aa20.42■□□□□ 0.86
CSPG5-205ENST00000610462 SPXQ9BT56 116 aa20.42■□□□□ 0.86
CSPG5-205ENST00000610462 XCL2Q9UBD3 114 aa20.42■□□□□ 0.86
CSPG5-205ENST00000610462 A6NDN8 102 aa20.41■□□□□ 0.86
CSPG5-205ENST00000610462 ADARB2-AS1A8MUL3 147 aa20.41■□□□□ 0.86
CSPG5-205ENST00000610462 I3L3M4 83 aa20.41■□□□□ 0.86
CSPG5-205ENST00000610462 SAP30O75446 220 aa20.41■□□□□ 0.86
CSPG5-205ENST00000610462 AMMECR1LQ6DCA0 310 aa20.41■□□□□ 0.86
CSPG5-205ENST00000610462 NACAE9PAV3 2078 aa20.41■□□□□ 0.86
CSPG5-205ENST00000610462 IGHV3-73A0A0B4J1V6 119 aa20.41■□□□□ 0.86
CSPG5-205ENST00000610462 CMC4P56277 68 aaPredicted RBP20.4■□□□□ 0.86
CSPG5-205ENST00000610462 K7EP13 123 aa20.39■□□□□ 0.86
CSPG5-205ENST00000610462 PMVKQ15126 192 aa20.39■□□□□ 0.85
CSPG5-205ENST00000610462 TRAV8-6A0A0B4J262 113 aa20.38■□□□□ 0.85
CSPG5-205ENST00000610462 LY6G6DO95868 133 aa20.38■□□□□ 0.85
CSPG5-205ENST00000610462 TRBV25-1A0A075B6N4 114 aa20.38■□□□□ 0.85
CSPG5-205ENST00000610462 BEAN1Q3B7T3 259 aa20.38■□□□□ 0.85
CSPG5-205ENST00000610462 CFAP126Q5VTH2 177 aa20.38■□□□□ 0.85
CSPG5-205ENST00000610462 C1orf158Q8N1D5 194 aa20.38■□□□□ 0.85
CSPG5-205ENST00000610462 P0DMU3 169 aa20.37■□□□□ 0.85
CSPG5-205ENST00000610462 FAM231AP0DMU4 169 aa20.37■□□□□ 0.85
CSPG5-205ENST00000610462 FAM231CP0DMU5 169 aa20.37■□□□□ 0.85
CSPG5-205ENST00000610462 MAPKAPK5-AS1Q8N8E1 139 aa20.37■□□□□ 0.85
CSPG5-205ENST00000610462 IGLV1-51P01701 117 aa20.36■□□□□ 0.85
CSPG5-205ENST00000610462 CST9LQ9H4G1 147 aa20.36■□□□□ 0.85
CSPG5-205ENST00000610462 H3BRM9 83 aa20.36■□□□□ 0.85
CSPG5-205ENST00000610462 CHAC1Q9BUX1 264 aa20.36■□□□□ 0.85
CSPG5-205ENST00000610462 MTORP42345 2549 aa20.36■□□□□ 0.85
CSPG5-205ENST00000610462 FASNP49327 2511 aaKnown RBP20.35■□□□□ 0.85
CSPG5-205ENST00000610462 C20orf203Q8NBC4 194 aa20.35■□□□□ 0.85
CSPG5-205ENST00000610462 MRPL16Q9NX20 251 aaKnown RBP20.35■□□□□ 0.85
CSPG5-205ENST00000610462 IGLV4-69A0A075B6H9 119 aa20.34■□□□□ 0.85
CSPG5-205ENST00000610462 RHODO00212 210 aa20.34■□□□□ 0.85
CSPG5-205ENST00000610462 AZU1P20160 251 aa20.34■□□□□ 0.85
CSPG5-205ENST00000610462 PAPPA-AS1Q5QFB9 102 aa20.34■□□□□ 0.85
CSPG5-205ENST00000610462 RNASE8Q8TDE3 154 aaKnown RBP20.34■□□□□ 0.85
CSPG5-205ENST00000610462 OR11H2Q8NH07 326 aa20.33■□□□□ 0.85
CSPG5-205ENST00000610462 E9PLD3 99 aa20.33■□□□□ 0.84
CSPG5-205ENST00000610462 RS1O15537 224 aa20.33■□□□□ 0.84
CSPG5-205ENST00000610462 TNFRSF18Q9Y5U5 241 aa20.33■□□□□ 0.84
CSPG5-205ENST00000610462 Q6ZSN1 163 aa20.32■□□□□ 0.84
CSPG5-205ENST00000610462 FAM110AQ9BQ89 295 aa20.32■□□□□ 0.84
CSPG5-205ENST00000610462 C9orf118A6NHY6 69 aa20.31■□□□□ 0.84
CSPG5-205ENST00000610462 CBY1Q9Y3M2 126 aa20.31■□□□□ 0.84
CSPG5-205ENST00000610462 GCN1Q92616 2671 aaKnown RBP20.31■□□□□ 0.84
CSPG5-205ENST00000610462 IGHV3OR16-12A0A075B7B8 117 aa20.31■□□□□ 0.84
CSPG5-205ENST00000610462 C11orf86A6NJI1 115 aa20.31■□□□□ 0.84
CSPG5-205ENST00000610462 IL17DQ8TAD2 202 aa20.3■□□□□ 0.84
CSPG5-205ENST00000610462 HIVEP2P31629 2446 aa20.29■□□□□ 0.84
CSPG5-205ENST00000610462 IGHV3-53P01767 116 aa20.29■□□□□ 0.84
CSPG5-205ENST00000610462 NDUFA11Q86Y39 141 aa20.28■□□□□ 0.84
CSPG5-205ENST00000610462 PRADC1Q9BSG0 188 aa20.28■□□□□ 0.84
CSPG5-205ENST00000610462 MYMXA0A1B0GTQ4 84 aa20.28■□□□□ 0.84
CSPG5-205ENST00000610462 KRTAP10-3P60369 221 aa20.28■□□□□ 0.84
CSPG5-205ENST00000610462 C19orf73Q9NVV2 129 aa20.28■□□□□ 0.84
CSPG5-205ENST00000610462 GCSHP23434 173 aa20.26■□□□□ 0.83
CSPG5-205ENST00000610462 EMP1P54849 157 aa20.26■□□□□ 0.83
CSPG5-205ENST00000610462 DNAJC30Q96LL9 226 aa20.26■□□□□ 0.83
CSPG5-205ENST00000610462 OPRPNQ99935 248 aaPredicted RBP20.26■□□□□ 0.83
CSPG5-205ENST00000610462 Q9UF83 564 aa20.26■□□□□ 0.83
CSPG5-205ENST00000610462 H3BUT2 72 aa20.25■□□□□ 0.83
CSPG5-205ENST00000610462 TAL2Q16559 108 aa20.25■□□□□ 0.83
CSPG5-205ENST00000610462 WFDC10AQ9H1F0 79 aa20.25■□□□□ 0.83
CSPG5-205ENST00000610462 SETD2Q9BYW2 2564 aaPredicted RBP20.24■□□□□ 0.83
CSPG5-205ENST00000610462 GAGE10A6NGK3 116 aa20.24■□□□□ 0.83
CSPG5-205ENST00000610462 GIG44P09565 113 aaPredicted RBP20.24■□□□□ 0.83
CSPG5-205ENST00000610462 HERVK_113P61574 105 aa20.24■□□□□ 0.83
CSPG5-205ENST00000610462 CEND1Q8N111 149 aa20.23■□□□□ 0.83
CSPG5-205ENST00000610462 TMEM263Q8WUH6 116 aaKnown RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms