RNA–Protein interactions for RNA: ENST00000607923.5

CTCFL-213, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,964 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-213ENST00000607923 USP24Q9UPU5 2620 aa10.19□□□□□ -0.78
CTCFL-213ENST00000607923 LINC01549A6NIU2 74 aa10.19□□□□□ -0.78
CTCFL-213ENST00000607923 ETDBQ3ZM63 59 aa10.19□□□□□ -0.78
CTCFL-213ENST00000607923 MORN3Q6PF18 240 aaPredicted RBP10.19□□□□□ -0.78
CTCFL-213ENST00000607923 NF1P21359 2839 aa10.19□□□□□ -0.78
CTCFL-213ENST00000607923 PPP1R17O96001 155 aa10.19□□□□□ -0.78
CTCFL-213ENST00000607923 TSPEAR-AS2P59090 65 aa10.19□□□□□ -0.78
CTCFL-213ENST00000607923 PMVKQ15126 192 aa10.19□□□□□ -0.78
CTCFL-213ENST00000607923 ZNRF2Q8NHG8 242 aa10.19□□□□□ -0.78
CTCFL-213ENST00000607923 IGIPA6NJ69 53 aa10.18□□□□□ -0.78
CTCFL-213ENST00000607923 G3V4G9 280 aa10.18□□□□□ -0.78
CTCFL-213ENST00000607923 CEMP1Q6PRD7 247 aaPredicted RBP10.18□□□□□ -0.78
CTCFL-213ENST00000607923 SYT8Q8NBV8 401 aa10.18□□□□□ -0.78
CTCFL-213ENST00000607923 Q9UF83 564 aa10.18□□□□□ -0.78
CTCFL-213ENST00000607923 RBMY1A1P0DJD3 496 aaKnown RBP10.18□□□□□ -0.78
CTCFL-213ENST00000607923 RBMY1CP0DJD4 496 aa10.18□□□□□ -0.78
CTCFL-213ENST00000607923 RBMY1FQ15415 496 aaKnown RBP10.18□□□□□ -0.78
CTCFL-213ENST00000607923 FOXI2Q6ZQN5 318 aa10.18□□□□□ -0.78
CTCFL-213ENST00000607923 JMJD1CQ15652 2540 aa10.17□□□□□ -0.78
CTCFL-213ENST00000607923 M0QY20 66 aa10.17□□□□□ -0.78
CTCFL-213ENST00000607923 NXPH4O95158 308 aa10.17□□□□□ -0.78
CTCFL-213ENST00000607923 BRI3O95415 125 aa10.17□□□□□ -0.78
CTCFL-213ENST00000607923 RRN3P1Q2M238 152 aa10.17□□□□□ -0.78
CTCFL-213ENST00000607923 ZNF580Q9UK33 172 aa10.17□□□□□ -0.78
CTCFL-213ENST00000607923 VPREB3Q9UKI3 123 aa10.17□□□□□ -0.78
CTCFL-213ENST00000607923 ADARB2-AS1A8MUL3 147 aa10.16□□□□□ -0.78
CTCFL-213ENST00000607923 H7C2G1 150 aa10.16□□□□□ -0.78
CTCFL-213ENST00000607923 HERVK_113P61574 105 aa10.16□□□□□ -0.78
CTCFL-213ENST00000607923 C9orf85Q96MD7 179 aa10.16□□□□□ -0.78
CTCFL-213ENST00000607923 TRBV7-9A0A0J9YWB2 115 aa10.16□□□□□ -0.78
CTCFL-213ENST00000607923 COX6B1P14854 86 aa10.16□□□□□ -0.78
CTCFL-213ENST00000607923 ACANP16112 2415 aa10.16□□□□□ -0.78
CTCFL-213ENST00000607923 IGHV3OR16-12A0A075B7B8 117 aa10.15□□□□□ -0.78
CTCFL-213ENST00000607923 TAL2Q16559 108 aa10.15□□□□□ -0.78
CTCFL-213ENST00000607923 ZNF702PQ9H963 129 aa10.15□□□□□ -0.78
CTCFL-213ENST00000607923 PSMB2P49721 201 aa10.15□□□□□ -0.78
CTCFL-213ENST00000607923 ZNF418Q8TF45 676 aaPredicted RBP10.15□□□□□ -0.78
CTCFL-213ENST00000607923 A0A1W2PRX2 142 aa10.14□□□□□ -0.79
CTCFL-213ENST00000607923 LGALS9O00182 355 aa10.14□□□□□ -0.79
CTCFL-213ENST00000607923 ZNF469Q96JG9 3925 aaPredicted RBP10.14□□□□□ -0.79
CTCFL-213ENST00000607923 IGHV3-38A0A0C4DH36 116 aa10.14□□□□□ -0.79
CTCFL-213ENST00000607923 A0A0J9YXV3 536 aa10.14□□□□□ -0.79
CTCFL-213ENST00000607923 GATA3P23771 443 aa10.14□□□□□ -0.79
CTCFL-213ENST00000607923 INSL3P51460 131 aa10.14□□□□□ -0.79
CTCFL-213ENST00000607923 BBC3Q96PG8 261 aaPredicted RBP10.14□□□□□ -0.79
CTCFL-213ENST00000607923 MTORP42345 2549 aa10.14□□□□□ -0.79
CTCFL-213ENST00000607923 LGALS3P17931 250 aaKnown RBP10.14□□□□□ -0.79
CTCFL-213ENST00000607923 TRBV27A0A0K0K1C4 114 aa10.13□□□□□ -0.79
CTCFL-213ENST00000607923 GAGE13Q4V321 117 aa10.13□□□□□ -0.79
CTCFL-213ENST00000607923 A0A1B0GWB2 263 aa10.13□□□□□ -0.79
CTCFL-213ENST00000607923 SHISA2Q6UWI4 295 aa10.13□□□□□ -0.79
CTCFL-213ENST00000607923 TRPT1Q86TN4 253 aaKnown RBP10.13□□□□□ -0.79
CTCFL-213ENST00000607923 TMEM61Q8N0U2 210 aa10.13□□□□□ -0.79
CTCFL-213ENST00000607923 POM121L12Q8N7R1 296 aa10.13□□□□□ -0.79
CTCFL-213ENST00000607923 SPXQ9BT56 116 aa10.13□□□□□ -0.79
CTCFL-213ENST00000607923 GTSF1LQ9H1H1 148 aa10.13□□□□□ -0.79
CTCFL-213ENST00000607923 A0A0J9YY99 117 aa10.12□□□□□ -0.79
CTCFL-213ENST00000607923 DSCR9P59020 149 aa10.12□□□□□ -0.79
CTCFL-213ENST00000607923 TRAV2A0A0B4J234 112 aa10.12□□□□□ -0.79
CTCFL-213ENST00000607923 J3QQQ9 107 aa10.12□□□□□ -0.79
CTCFL-213ENST00000607923 IGHV4-31P0DP07 118 aa10.12□□□□□ -0.79
CTCFL-213ENST00000607923 TMEM141Q96I45 108 aa10.11□□□□□ -0.79
CTCFL-213ENST00000607923 TSSC4Q9Y5U2 329 aaPredicted RBP10.11□□□□□ -0.79
CTCFL-213ENST00000607923 A0A096LNT2 108 aa10.11□□□□□ -0.79
CTCFL-213ENST00000607923 RBMY1BA6NDE4 496 aaKnown RBP10.11□□□□□ -0.79
CTCFL-213ENST00000607923 RBMY1EA6NEQ0 496 aaKnown RBP10.11□□□□□ -0.79
CTCFL-213ENST00000607923 RBMY1DP0C7P1 496 aaKnown RBP10.11□□□□□ -0.79
CTCFL-213ENST00000607923 Q6YL49 198 aa10.11□□□□□ -0.79
CTCFL-213ENST00000607923 RAX2Q96IS3 184 aa10.11□□□□□ -0.79
CTCFL-213ENST00000607923 VCX2Q9H322 139 aa10.11□□□□□ -0.79
CTCFL-213ENST00000607923 NIPBLQ6KC79 2804 aaeCLIP10.11□□□□□ -0.796e-7■■□□□ 12.1
CTCFL-213ENST00000607923 TSPAN13O95857 204 aa10.11□□□□□ -0.79
CTCFL-213ENST00000607923 NPC2P61916 151 aa10.11□□□□□ -0.79
CTCFL-213ENST00000607923 SAMD13Q5VXD3 122 aa10.11□□□□□ -0.79
CTCFL-213ENST00000607923 DYNLRB2Q8TF09 96 aa10.11□□□□□ -0.79
CTCFL-213ENST00000607923 PTH2Q96A98 100 aa10.11□□□□□ -0.79
CTCFL-213ENST00000607923 UBE2E2Q96LR5 201 aa10.11□□□□□ -0.79
CTCFL-213ENST00000607923 TIMM17AQ99595 171 aa10.11□□□□□ -0.79
CTCFL-213ENST00000607923 SPAG8Q99932 426 aaPredicted RBP10.11□□□□□ -0.79
CTCFL-213ENST00000607923 I3L3M4 83 aa10.1□□□□□ -0.79
CTCFL-213ENST00000607923 ELANEP08246 267 aa10.1□□□□□ -0.79
CTCFL-213ENST00000607923 Q6ZSN1 163 aa10.1□□□□□ -0.79
CTCFL-213ENST00000607923 Q96MF0 132 aa10.1□□□□□ -0.79
CTCFL-213ENST00000607923 LINC01587Q99440 93 aa10.1□□□□□ -0.79
CTCFL-213ENST00000607923 SPANXB1Q9NS25 103 aaPredicted RBP10.1□□□□□ -0.79
CTCFL-213ENST00000607923 A8MZ25 164 aa10.1□□□□□ -0.79
CTCFL-213ENST00000607923 CD28P10747 220 aa10.1□□□□□ -0.79
CTCFL-213ENST00000607923 TRGV11A0A075B6L2 103 aa10.09□□□□□ -0.79
CTCFL-213ENST00000607923 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.09□□□□□ -0.79
CTCFL-213ENST00000607923 IGKV2-29A2NJV5 120 aaPredicted RBP10.09□□□□□ -0.79
CTCFL-213ENST00000607923 SCGB1C2P0DMR2 95 aa10.09□□□□□ -0.79
CTCFL-213ENST00000607923 C20orf203Q8NBC4 194 aa10.09□□□□□ -0.79
CTCFL-213ENST00000607923 DLX4Q92988 240 aaPredicted RBP10.09□□□□□ -0.79
CTCFL-213ENST00000607923 TRAV8-3A0A0A6YYJ7 113 aa10.09□□□□□ -0.79
CTCFL-213ENST00000607923 PAPPA-AS1Q5QFB9 102 aa10.09□□□□□ -0.79
CTCFL-213ENST00000607923 TNFRSF18Q9Y5U5 241 aa10.09□□□□□ -0.79
CTCFL-213ENST00000607923 CR1P17927 2039 aa10.09□□□□□ -0.79
CTCFL-213ENST00000607923 TRBV6-5A0A0K0K1A5 114 aa10.08□□□□□ -0.8
CTCFL-213ENST00000607923 F8W1H4 67 aa10.08□□□□□ -0.8
CTCFL-213ENST00000607923 SMAGPQ0VAQ4 97 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms