RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 MUC21A0A0G2JKD1 596 aa10.12□□□□□ -0.79
LIG1-214ENST00000597146 MUC21A0A140T8X8 626 aa10.12□□□□□ -0.79
LIG1-214ENST00000597146 XKRY2A2RUG3 117 aa10.12□□□□□ -0.79
LIG1-214ENST00000597146 RPS20P60866 119 aaKnown RBP10.12□□□□□ -0.79
LIG1-214ENST00000597146 C14orf178Q8N769 122 aaPredicted RBP10.12□□□□□ -0.79
LIG1-214ENST00000597146 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.12□□□□□ -0.79
LIG1-214ENST00000597146 DERL1Q9BUN8 251 aa10.12□□□□□ -0.79
LIG1-214ENST00000597146 URGCP-MRPS24S4R325 110 aa10.12□□□□□ -0.79
LIG1-214ENST00000597146 BCL2P10415 239 aa10.11□□□□□ -0.79
LIG1-214ENST00000597146 RPL36AP83881 106 aaKnown RBP10.11□□□□□ -0.79
LIG1-214ENST00000597146 ZNF56Q15929 161 aa10.11□□□□□ -0.79
LIG1-214ENST00000597146 KCNIP4Q6PIL6 250 aa10.11□□□□□ -0.79
LIG1-214ENST00000597146 OR2D3Q8NGH3 330 aa10.11□□□□□ -0.79
LIG1-214ENST00000597146 RPL36ALQ969Q0 106 aaKnown RBP10.11□□□□□ -0.79
LIG1-214ENST00000597146 C11orf52Q96A22 123 aa10.11□□□□□ -0.79
LIG1-214ENST00000597146 CXCL1P09341 107 aa10.1□□□□□ -0.79
LIG1-214ENST00000597146 ALKAL2Q6UX46 152 aa10.1□□□□□ -0.79
LIG1-214ENST00000597146 C9orf62Q8N4C0 152 aa10.1□□□□□ -0.79
LIG1-214ENST00000597146 TM2D2Q9BX73 214 aa10.1□□□□□ -0.79
LIG1-214ENST00000597146 KRTAP9-2Q9BYQ4 174 aa10.1□□□□□ -0.79
LIG1-214ENST00000597146 RBFOX3A6NFN3 312 aa10.09□□□□□ -0.79
LIG1-214ENST00000597146 P01737 135 aa10.09□□□□□ -0.79
LIG1-214ENST00000597146 RAB4BP61018 213 aa10.09□□□□□ -0.79
LIG1-214ENST00000597146 Q8N3U1 123 aa10.09□□□□□ -0.79
LIG1-214ENST00000597146 OR10AG1Q8NH19 301 aa10.09□□□□□ -0.79
LIG1-214ENST00000597146 BAALCQ8WXS3 180 aa10.09□□□□□ -0.79
LIG1-214ENST00000597146 ODF1Q14990 250 aa10.08□□□□□ -0.8
LIG1-214ENST00000597146 UFSP1Q6NVU6 142 aa10.08□□□□□ -0.8
LIG1-214ENST00000597146 SMIM12Q96EX1 92 aa10.08□□□□□ -0.8
LIG1-214ENST00000597146 TRBV10-1A0A0K0K1A3 114 aa10.07□□□□□ -0.8
LIG1-214ENST00000597146 GAS8-AS1O95177 125 aa10.07□□□□□ -0.8
LIG1-214ENST00000597146 OR5AL1P0C617 328 aa10.07□□□□□ -0.8
LIG1-214ENST00000597146 CEBPGP53567 150 aa10.07□□□□□ -0.8
LIG1-214ENST00000597146 LAGE3Q14657 143 aa10.07□□□□□ -0.8
LIG1-214ENST00000597146 FER1L6-AS1Q8NA97 138 aa10.07□□□□□ -0.8
LIG1-214ENST00000597146 TRBV7-3A0A075B6L6 115 aa10.06□□□□□ -0.8
LIG1-214ENST00000597146 TMEM262E9PQX1 116 aa10.06□□□□□ -0.8
LIG1-214ENST00000597146 SNAI2O43623 268 aa10.06□□□□□ -0.8
LIG1-214ENST00000597146 GZMBP10144 247 aa10.06□□□□□ -0.8
LIG1-214ENST00000597146 TOR2AQ5JU69 321 aa10.06□□□□□ -0.8
LIG1-214ENST00000597146 SSBP4Q9BWG4 385 aaPredicted RBP10.06□□□□□ -0.8
LIG1-214ENST00000597146 Q9UF83 564 aa10.06□□□□□ -0.8
LIG1-214ENST00000597146 A0A087WX48 190 aa10.05□□□□□ -0.8
LIG1-214ENST00000597146 F2Z2F3 143 aa10.05□□□□□ -0.8
LIG1-214ENST00000597146 MGPP08493 103 aa10.05□□□□□ -0.8
LIG1-214ENST00000597146 CACNG7P62955 275 aa10.05□□□□□ -0.8
LIG1-214ENST00000597146 AP1S3Q96PC3 154 aa10.05□□□□□ -0.8
LIG1-214ENST00000597146 EIF5A2Q9GZV4 153 aaKnown RBP10.05□□□□□ -0.8
LIG1-214ENST00000597146 TRAV8-3A0A0A6YYJ7 113 aa10.04□□□□□ -0.8
LIG1-214ENST00000597146 NKX2-5P52952 324 aaPredicted RBP10.04□□□□□ -0.8
LIG1-214ENST00000597146 ELOBQ15370 118 aa10.03□□□□□ -0.8
LIG1-214ENST00000597146 NUDT10Q8NFP7 164 aa10.03□□□□□ -0.8
LIG1-214ENST00000597146 NUDT11Q96G61 164 aa10.03□□□□□ -0.8
LIG1-214ENST00000597146 C19orf71A6NCJ1 209 aa10.02□□□□□ -0.81
LIG1-214ENST00000597146 H7C1H1 209 aa10.02□□□□□ -0.81
LIG1-214ENST00000597146 TRGC1P0CF51 173 aa10.02□□□□□ -0.81
LIG1-214ENST00000597146 LYZL1Q6UWQ5 148 aa10.02□□□□□ -0.81
LIG1-214ENST00000597146 Q6ZRU5 148 aa10.02□□□□□ -0.81
LIG1-214ENST00000597146 DAZ4Q86SG3 579 aaKnown RBP10.02□□□□□ -0.81
LIG1-214ENST00000597146 OCC1Q8TAD7 63 aa10.02□□□□□ -0.81
LIG1-214ENST00000597146 RMI2Q96E14 147 aa10.02□□□□□ -0.81
LIG1-214ENST00000597146 DAZ3Q9NR90 486 aaKnown RBP10.02□□□□□ -0.81
LIG1-214ENST00000597146 A0A1B0GVG6 124 aa10.01□□□□□ -0.81
LIG1-214ENST00000597146 LINC00694P0DN24 101 aa10.01□□□□□ -0.81
LIG1-214ENST00000597146 UBE2D3P61077 147 aa10.01□□□□□ -0.81
LIG1-214ENST00000597146 UBE2D2P62837 147 aa10.01□□□□□ -0.81
LIG1-214ENST00000597146 TWIST1Q15672 202 aa10.01□□□□□ -0.81
LIG1-214ENST00000597146 SMIM15Q7Z3B0 74 aa10.01□□□□□ -0.81
LIG1-214ENST00000597146 LPAP08519 4548 aa10.01□□□□□ -0.81
LIG1-214ENST00000597146 TMEM250H0YL14 139 aa10□□□□□ -0.81
LIG1-214ENST00000597146 GATCO43716 136 aaKnown RBP10□□□□□ -0.81
LIG1-214ENST00000597146 TMEM97Q5BJF2 176 aa10□□□□□ -0.81
LIG1-214ENST00000597146 Q8N976 141 aa10□□□□□ -0.81
LIG1-214ENST00000597146 NEXN-AS1Q8NBZ9 246 aa10□□□□□ -0.81
LIG1-214ENST00000597146 OR10G8Q8NGN5 311 aa10□□□□□ -0.81
LIG1-214ENST00000597146 CHCHD5Q9BSY4 110 aa10□□□□□ -0.81
LIG1-214ENST00000597146 RPP21Q9H633 154 aaKnown RBP10□□□□□ -0.81
LIG1-214ENST00000597146 KLK12Q9UKR0 248 aa10□□□□□ -0.81
LIG1-214ENST00000597146 COX11Q9Y6N1 276 aa10□□□□□ -0.81
LIG1-214ENST00000597146 TRBV20OR9-2A0A075B6H5 130 aa9.99□□□□□ -0.81
LIG1-214ENST00000597146 IGLC6P0CF74 106 aa9.99□□□□□ -0.81
LIG1-214ENST00000597146 NTF3P20783 257 aa9.99□□□□□ -0.81
LIG1-214ENST00000597146 NIT1Q86X76 327 aa9.99□□□□□ -0.81
LIG1-214ENST00000597146 DNAJC30Q96LL9 226 aa9.99□□□□□ -0.81
LIG1-214ENST00000597146 RNASE7Q9H1E1 156 aaKnown RBP9.99□□□□□ -0.81
LIG1-214ENST00000597146 TRBV6-8A0A0A6YYG3 113 aa9.98□□□□□ -0.81
LIG1-214ENST00000597146 PKIAP61925 76 aa9.98□□□□□ -0.81
LIG1-214ENST00000597146 WDR73Q6P4I2 378 aa9.98□□□□□ -0.81
LIG1-214ENST00000597146 UBE2WQ96B02 151 aa9.98□□□□□ -0.81
LIG1-214ENST00000597146 BORCS7Q96B45 105 aa9.98□□□□□ -0.81
LIG1-214ENST00000597146 FAT4Q6V0I7 4981 aa9.98□□□□□ -0.81
LIG1-214ENST00000597146 IGKV2D-24A0A075B6R9 120 aa9.97□□□□□ -0.81
LIG1-214ENST00000597146 KRTAP9-6A0A140TA67 174 aa9.97□□□□□ -0.81
LIG1-214ENST00000597146 SMIM7Q9BQ49 75 aa9.97□□□□□ -0.81
LIG1-214ENST00000597146 DPH3P1Q9H4G8 78 aa9.97□□□□□ -0.81
LIG1-214ENST00000597146 ZNF727A8MUV8 499 aa9.96□□□□□ -0.82
LIG1-214ENST00000597146 A8MWL6 223 aa9.96□□□□□ -0.82
LIG1-214ENST00000597146 CRPP02741 224 aa9.96□□□□□ -0.82
LIG1-214ENST00000597146 LYPD6BQ8NI32 183 aa9.96□□□□□ -0.82
LIG1-214ENST00000597146 CHCHD7Q9BUK0 85 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms