RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 RPL23P62829 140 aaKnown RBP11.74□□□□□ -0.53
SHKBP1-212ENST00000596163 ADIRFQ15847 76 aa11.74□□□□□ -0.53
SHKBP1-212ENST00000596163 ISOC2Q96AB3 205 aa11.74□□□□□ -0.53
SHKBP1-212ENST00000596163 TNFRSF18Q9Y5U5 241 aa11.74□□□□□ -0.53
SHKBP1-212ENST00000596163 TMEM97Q5BJF2 176 aa11.73□□□□□ -0.53
SHKBP1-212ENST00000596163 PGLYRP4Q96LB8 373 aa11.73□□□□□ -0.53
SHKBP1-212ENST00000596163 DNAH17Q9UFH2 4485 aa11.73□□□□□ -0.53
SHKBP1-212ENST00000596163 A0A1B0GVY2 172 aa11.72□□□□□ -0.53
SHKBP1-212ENST00000596163 CLLU1Q5K131 121 aa11.72□□□□□ -0.53
SHKBP1-212ENST00000596163 SUMO4Q6EEV6 95 aa11.72□□□□□ -0.53
SHKBP1-212ENST00000596163 DAZ4Q86SG3 579 aaKnown RBP11.72□□□□□ -0.53
SHKBP1-212ENST00000596163 DAZ3Q9NR90 486 aaKnown RBP11.72□□□□□ -0.53
SHKBP1-212ENST00000596163 HIGD1CA8MV81 97 aa11.71□□□□□ -0.53
SHKBP1-212ENST00000596163 M0QY20 66 aa11.71□□□□□ -0.53
SHKBP1-212ENST00000596163 TNP2Q05952 138 aa11.71□□□□□ -0.53
SHKBP1-212ENST00000596163 KCNIP4Q6PIL6 250 aa11.71□□□□□ -0.53
SHKBP1-212ENST00000596163 RASL11AQ6T310 242 aa11.71□□□□□ -0.53
SHKBP1-212ENST00000596163 URGCP-MRPS24S4R325 110 aa11.71□□□□□ -0.53
SHKBP1-212ENST00000596163 BIRC6Q9NR09 4857 aa11.71□□□□□ -0.54
SHKBP1-212ENST00000596163 FRAS1Q86XX4 4008 aa11.71□□□□□ -0.54
SHKBP1-212ENST00000596163 A0A1B0GUT8 65 aa11.7□□□□□ -0.54
SHKBP1-212ENST00000596163 IGHV3-30P01768 117 aa11.7□□□□□ -0.54
SHKBP1-212ENST00000596163 IGHV3-33P01772 117 aa11.7□□□□□ -0.54
SHKBP1-212ENST00000596163 IGHV3-30-3P0DP02 117 aa11.7□□□□□ -0.54
SHKBP1-212ENST00000596163 IGHV3-30-5P0DP03 117 aa11.7□□□□□ -0.54
SHKBP1-212ENST00000596163 FRZBQ92765 325 aa11.7□□□□□ -0.54
SHKBP1-212ENST00000596163 V9GYV3 84 aa11.7□□□□□ -0.54
SHKBP1-212ENST00000596163 IBA57-AS1B1ANH7 110 aa11.69□□□□□ -0.54
SHKBP1-212ENST00000596163 NIT2Q9NQR4 276 aa11.69□□□□□ -0.54
SHKBP1-212ENST00000596163 TRBV6-8A0A0A6YYG3 113 aa11.68□□□□□ -0.54
SHKBP1-212ENST00000596163 PKIAP61925 76 aa11.68□□□□□ -0.54
SHKBP1-212ENST00000596163 RIGQ13278 110 aa11.68□□□□□ -0.54
SHKBP1-212ENST00000596163 CHCHD7Q9BUK0 85 aa11.68□□□□□ -0.54
SHKBP1-212ENST00000596163 NAT8BQ9UHF3 227 aa11.68□□□□□ -0.54
SHKBP1-212ENST00000596163 A0A087WX48 190 aa11.67□□□□□ -0.54
SHKBP1-212ENST00000596163 EREGO14944 169 aa11.67□□□□□ -0.54
SHKBP1-212ENST00000596163 LAGE3Q14657 143 aa11.67□□□□□ -0.54
SHKBP1-212ENST00000596163 ELOBQ15370 118 aa11.67□□□□□ -0.54
SHKBP1-212ENST00000596163 NIT1Q86X76 327 aa11.67□□□□□ -0.54
SHKBP1-212ENST00000596163 TMEM262E9PQX1 116 aa11.66□□□□□ -0.54
SHKBP1-212ENST00000596163 Q6ZRN7 208 aaPredicted RBP11.66□□□□□ -0.54
SHKBP1-212ENST00000596163 FAT2Q9NYQ8 4349 aa11.66□□□□□ -0.54
SHKBP1-212ENST00000596163 TRAV8-3A0A0A6YYJ7 113 aa11.65□□□□□ -0.54
SHKBP1-212ENST00000596163 IFITM2Q01629 132 aa11.65□□□□□ -0.54
SHKBP1-212ENST00000596163 NUP35Q8NFH5 326 aa11.65□□□□□ -0.54
SHKBP1-212ENST00000596163 TMEM191AQ9H0A3 160 aa11.65□□□□□ -0.54
SHKBP1-212ENST00000596163 SMIM27A0A1W2PRY6 76 aa11.64□□□□□ -0.55
SHKBP1-212ENST00000596163 PPP1R2P9O14990 202 aa11.64□□□□□ -0.55
SHKBP1-212ENST00000596163 PSCAO43653 123 aa11.64□□□□□ -0.55
SHKBP1-212ENST00000596163 PNRC1Q12796 327 aaPredicted RBP11.64□□□□□ -0.55
SHKBP1-212ENST00000596163 GATD1Q8NB37 220 aa11.64□□□□□ -0.55
SHKBP1-212ENST00000596163 CHCHD5Q9BSY4 110 aa11.64□□□□□ -0.55
SHKBP1-212ENST00000596163 TM2D2Q9BX73 214 aa11.64□□□□□ -0.55
SHKBP1-212ENST00000596163 TRBV25-1A0A075B6N4 114 aa11.63□□□□□ -0.55
SHKBP1-212ENST00000596163 IGHV1-24A0A0C4DH33 117 aa11.63□□□□□ -0.55
SHKBP1-212ENST00000596163 UQCC3Q6UW78 93 aa11.63□□□□□ -0.55
SHKBP1-212ENST00000596163 Q9HAA7 133 aa11.63□□□□□ -0.55
SHKBP1-212ENST00000596163 HECTD4Q9Y4D8 3996 aa11.63□□□□□ -0.55
SHKBP1-212ENST00000596163 A0A1B0GW15 77 aa11.62□□□□□ -0.55
SHKBP1-212ENST00000596163 RMI2Q96E14 147 aa11.62□□□□□ -0.55
SHKBP1-212ENST00000596163 TRAV26-2A0A0B4J265 109 aa11.61□□□□□ -0.55
SHKBP1-212ENST00000596163 IQCJQ1A5X6 159 aa11.61□□□□□ -0.55
SHKBP1-212ENST00000596163 COX11Q9Y6N1 276 aa11.61□□□□□ -0.55
SHKBP1-212ENST00000596163 MT-ND4LP03901 98 aa11.6□□□□□ -0.55
SHKBP1-212ENST00000596163 S100A8P05109 93 aa11.6□□□□□ -0.55
SHKBP1-212ENST00000596163 COTL1Q14019 142 aa11.6□□□□□ -0.55
SHKBP1-212ENST00000596163 NTM-AS1Q6ZSK4 140 aa11.6□□□□□ -0.55
SHKBP1-212ENST00000596163 Q8N3U1 123 aa11.6□□□□□ -0.55
SHKBP1-212ENST00000596163 MRAP2Q96G30 205 aa11.6□□□□□ -0.55
SHKBP1-212ENST00000596163 KLK12Q9UKR0 248 aa11.6□□□□□ -0.55
SHKBP1-212ENST00000596163 RAB4AP20338 218 aa11.59□□□□□ -0.55
SHKBP1-212ENST00000596163 Q0VG73 95 aa11.59□□□□□ -0.55
SHKBP1-212ENST00000596163 SPATA12Q7Z6I5 190 aa11.59□□□□□ -0.55
SHKBP1-212ENST00000596163 ANAPC16Q96DE5 110 aa11.59□□□□□ -0.55
SHKBP1-212ENST00000596163 A0A087WTM6 91 aa11.58□□□□□ -0.56
SHKBP1-212ENST00000596163 PPP1R17O96001 155 aa11.58□□□□□ -0.56
SHKBP1-212ENST00000596163 RPL39LQ96EH5 51 aaKnown RBP11.58□□□□□ -0.56
SHKBP1-212ENST00000596163 TMEM243Q9BU79 118 aa11.58□□□□□ -0.56
SHKBP1-212ENST00000596163 PGPEP1Q9NXJ5 209 aa11.58□□□□□ -0.56
SHKBP1-212ENST00000596163 TRBV6-5A0A0K0K1A5 114 aa11.57□□□□□ -0.56
SHKBP1-212ENST00000596163 C16orf90A8MZG2 172 aa11.57□□□□□ -0.56
SHKBP1-212ENST00000596163 NCR2O95944 276 aa11.57□□□□□ -0.56
SHKBP1-212ENST00000596163 CAMPP49913 170 aa11.57□□□□□ -0.56
SHKBP1-212ENST00000596163 GAGE6Q13070 117 aa11.57□□□□□ -0.56
SHKBP1-212ENST00000596163 ATRAIDQ6UW56 229 aa11.57□□□□□ -0.56
SHKBP1-212ENST00000596163 AMN1Q8IY45 258 aa11.57□□□□□ -0.56
SHKBP1-212ENST00000596163 UBE2WQ96B02 151 aa11.57□□□□□ -0.56
SHKBP1-212ENST00000596163 RNF185Q96GF1 192 aa11.57□□□□□ -0.56
SHKBP1-212ENST00000596163 ST20Q9HBF5 79 aa11.57□□□□□ -0.56
SHKBP1-212ENST00000596163 TMEM218A2RU14 115 aa11.56□□□□□ -0.56
SHKBP1-212ENST00000596163 SDHAF1A6NFY7 115 aa11.56□□□□□ -0.56
SHKBP1-212ENST00000596163 F8W036 122 aa11.56□□□□□ -0.56
SHKBP1-212ENST00000596163 UBE2L6O14933 153 aa11.56□□□□□ -0.56
SHKBP1-212ENST00000596163 CRPP02741 224 aa11.56□□□□□ -0.56
SHKBP1-212ENST00000596163 ANGP03950 147 aaKnown RBP11.56□□□□□ -0.56
SHKBP1-212ENST00000596163 PMCHP20382 165 aa11.56□□□□□ -0.56
SHKBP1-212ENST00000596163 AMTP48728 403 aa11.56□□□□□ -0.56
SHKBP1-212ENST00000596163 MPV17L2Q567V2 206 aa11.56□□□□□ -0.56
SHKBP1-212ENST00000596163 HBBP68871 147 aa11.55□□□□□ -0.56
SHKBP1-212ENST00000596163 FAM104BQ5XKR9 115 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms