RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 OR10AG1Q8NH19 301 aa8.96□□□□□ -0.98
SHKBP1-208ENST00000595726 ATP6V0E2Q8NHE4 81 aa8.96□□□□□ -0.98
SHKBP1-208ENST00000595726 SMIM12Q96EX1 92 aa8.96□□□□□ -0.98
SHKBP1-208ENST00000595726 GTSF1LQ9H1H1 148 aa8.96□□□□□ -0.98
SHKBP1-208ENST00000595726 Q9UF83 564 aa8.96□□□□□ -0.98
SHKBP1-208ENST00000595726 VAX2Q9UIW0 290 aa8.96□□□□□ -0.98
SHKBP1-208ENST00000595726 RAB19A4D1S5 217 aa8.95□□□□□ -0.98
SHKBP1-208ENST00000595726 OR5AL1P0C617 328 aa8.95□□□□□ -0.98
SHKBP1-208ENST00000595726 GNG4P50150 75 aa8.95□□□□□ -0.98
SHKBP1-208ENST00000595726 NKX2-5P52952 324 aaPredicted RBP8.95□□□□□ -0.98
SHKBP1-208ENST00000595726 LELP1Q5T871 98 aa8.95□□□□□ -0.98
SHKBP1-208ENST00000595726 SSBP4Q9BWG4 385 aaPredicted RBP8.95□□□□□ -0.98
SHKBP1-208ENST00000595726 MED9Q9NWA0 146 aa8.95□□□□□ -0.98
SHKBP1-208ENST00000595726 TRAV8-6A0A0B4J262 113 aa8.94□□□□□ -0.98
SHKBP1-208ENST00000595726 C19orf71A6NCJ1 209 aa8.94□□□□□ -0.98
SHKBP1-208ENST00000595726 TAGLN2P37802 199 aaKnown RBP8.94□□□□□ -0.98
SHKBP1-208ENST00000595726 MUC21A0A0G2JKD1 596 aa8.92□□□□□ -0.98
SHKBP1-208ENST00000595726 MUC21A0A140T8X8 626 aa8.92□□□□□ -0.98
SHKBP1-208ENST00000595726 GAS8-AS1O95177 125 aa8.92□□□□□ -0.98
SHKBP1-208ENST00000595726 BLOC1S1P78537 153 aa8.92□□□□□ -0.98
SHKBP1-208ENST00000595726 SPANXN1Q5VSR9 72 aa8.92□□□□□ -0.98
SHKBP1-208ENST00000595726 LYPD6BQ8NI32 183 aa8.92□□□□□ -0.98
SHKBP1-208ENST00000595726 TRBV10-1A0A0K0K1A3 114 aa8.91□□□□□ -0.98
SHKBP1-208ENST00000595726 IGLC6P0CF74 106 aa8.91□□□□□ -0.98
SHKBP1-208ENST00000595726 GZMBP10144 247 aa8.91□□□□□ -0.98
SHKBP1-208ENST00000595726 LAGE3Q14657 143 aa8.91□□□□□ -0.98
SHKBP1-208ENST00000595726 ZNF56Q15929 161 aa8.91□□□□□ -0.98
SHKBP1-208ENST00000595726 OR2D3Q8NGH3 330 aa8.91□□□□□ -0.98
SHKBP1-208ENST00000595726 DNAJC30Q96LL9 226 aa8.91□□□□□ -0.98
SHKBP1-208ENST00000595726 KRTAP9-2Q9BYQ4 174 aa8.91□□□□□ -0.98
SHKBP1-208ENST00000595726 P01737 135 aa8.9□□□□□ -0.98
SHKBP1-208ENST00000595726 RPS20P60866 119 aaKnown RBP8.9□□□□□ -0.98
SHKBP1-208ENST00000595726 RAB4BP61018 213 aa8.9□□□□□ -0.98
SHKBP1-208ENST00000595726 DAZ4Q86SG3 579 aaKnown RBP8.9□□□□□ -0.98
SHKBP1-208ENST00000595726 DAZ3Q9NR90 486 aaKnown RBP8.9□□□□□ -0.98
SHKBP1-208ENST00000595726 LPAP08519 4548 aa8.9□□□□□ -0.99
SHKBP1-208ENST00000595726 A0A087WWC5 75 aa8.89□□□□□ -0.99
SHKBP1-208ENST00000595726 SSTP61278 116 aa8.89□□□□□ -0.99
SHKBP1-208ENST00000595726 RPL36AP83881 106 aaKnown RBP8.89□□□□□ -0.99
SHKBP1-208ENST00000595726 Q8N976 141 aa8.89□□□□□ -0.99
SHKBP1-208ENST00000595726 FER1L6-AS1Q8NA97 138 aa8.89□□□□□ -0.99
SHKBP1-208ENST00000595726 OR10G8Q8NGN5 311 aa8.89□□□□□ -0.99
SHKBP1-208ENST00000595726 RPL36ALQ969Q0 106 aaKnown RBP8.89□□□□□ -0.99
SHKBP1-208ENST00000595726 AP1S3Q96PC3 154 aa8.89□□□□□ -0.99
SHKBP1-208ENST00000595726 TPPP3Q9BW30 176 aa8.89□□□□□ -0.99
SHKBP1-208ENST00000595726 BIN3Q9NQY0 253 aa8.89□□□□□ -0.99
SHKBP1-208ENST00000595726 KIF25-AS1Q9Y6Z4 181 aa8.89□□□□□ -0.99
SHKBP1-208ENST00000595726 TRBV7-3A0A075B6L6 115 aa8.88□□□□□ -0.99
SHKBP1-208ENST00000595726 TRAV8-3A0A0A6YYJ7 113 aa8.88□□□□□ -0.99
SHKBP1-208ENST00000595726 TMEM250H0YL14 139 aa8.88□□□□□ -0.99
SHKBP1-208ENST00000595726 K7EN84 100 aa8.88□□□□□ -0.99
SHKBP1-208ENST00000595726 UBE2D3P61077 147 aa8.88□□□□□ -0.99
SHKBP1-208ENST00000595726 UBE2D2P62837 147 aa8.88□□□□□ -0.99
SHKBP1-208ENST00000595726 Q6ZRU5 148 aa8.88□□□□□ -0.99
SHKBP1-208ENST00000595726 NEXN-AS1Q8NBZ9 246 aa8.88□□□□□ -0.99
SHKBP1-208ENST00000595726 XKRY2A2RUG3 117 aa8.87□□□□□ -0.99
SHKBP1-208ENST00000595726 TOR2AQ5JU69 321 aa8.87□□□□□ -0.99
SHKBP1-208ENST00000595726 NUDT10Q8NFP7 164 aa8.87□□□□□ -0.99
SHKBP1-208ENST00000595726 OCC1Q8TAD7 63 aa8.87□□□□□ -0.99
SHKBP1-208ENST00000595726 NUDT11Q96G61 164 aa8.87□□□□□ -0.99
SHKBP1-208ENST00000595726 SMIM17P0DL12 118 aa8.86□□□□□ -0.99
SHKBP1-208ENST00000595726 CACNG7P62955 275 aa8.86□□□□□ -0.99
SHKBP1-208ENST00000595726 RNASE7Q9H1E1 156 aaKnown RBP8.86□□□□□ -0.99
SHKBP1-208ENST00000595726 F2Z2F3 143 aa8.85□□□□□ -0.99
SHKBP1-208ENST00000595726 F5H697 171 aa8.85□□□□□ -0.99
SHKBP1-208ENST00000595726 CTRLP40313 264 aa8.85□□□□□ -0.99
SHKBP1-208ENST00000595726 C4orf48Q5BLP8 95 aa8.85□□□□□ -0.99
SHKBP1-208ENST00000595726 LYZL1Q6UWQ5 148 aa8.85□□□□□ -0.99
SHKBP1-208ENST00000595726 NIT1Q86X76 327 aa8.85□□□□□ -0.99
SHKBP1-208ENST00000595726 FAM210AQ96ND0 272 aa8.85□□□□□ -0.99
SHKBP1-208ENST00000595726 RPP21Q9H633 154 aaKnown RBP8.85□□□□□ -0.99
SHKBP1-208ENST00000595726 MUC2Q02817 5179 aa8.84□□□□□ -0.99
SHKBP1-208ENST00000595726 IGKV2D-24A0A075B6R9 120 aa8.84□□□□□ -0.99
SHKBP1-208ENST00000595726 CEBPGP53567 150 aa8.84□□□□□ -0.99
SHKBP1-208ENST00000595726 EIF5A2Q9GZV4 153 aaKnown RBP8.84□□□□□ -0.99
SHKBP1-208ENST00000595726 TMA7Q9Y2S6 64 aaKnown RBP8.84□□□□□ -0.99
SHKBP1-208ENST00000595726 TRBV6-8A0A0A6YYG3 113 aa8.83□□□□□ -1
SHKBP1-208ENST00000595726 PANO1I0J062 215 aa8.83□□□□□ -1
SHKBP1-208ENST00000595726 NDUFS6O75380 124 aaKnown RBP8.83□□□□□ -1
SHKBP1-208ENST00000595726 MGPP08493 103 aa8.83□□□□□ -1
SHKBP1-208ENST00000595726 CNFNQ9BYD5 112 aa8.83□□□□□ -1
SHKBP1-208ENST00000595726 M0QY20 66 aa8.82□□□□□ -1
SHKBP1-208ENST00000595726 TRGC1P0CF51 173 aa8.82□□□□□ -1
SHKBP1-208ENST00000595726 NTF3P20783 257 aa8.82□□□□□ -1
SHKBP1-208ENST00000595726 SUMO4Q6EEV6 95 aa8.82□□□□□ -1
SHKBP1-208ENST00000595726 FAM231DQ6ZW35 169 aa8.82□□□□□ -1
SHKBP1-208ENST00000595726 CHCHD7Q9BUK0 85 aa8.82□□□□□ -1
SHKBP1-208ENST00000595726 COX11Q9Y6N1 276 aa8.82□□□□□ -1
SHKBP1-208ENST00000595726 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.82□□□□□ -1
SHKBP1-208ENST00000595726 URGCP-MRPS24S4R325 110 aa8.82□□□□□ -1
SHKBP1-208ENST00000595726 WDR73Q6P4I2 378 aa8.81□□□□□ -1
SHKBP1-208ENST00000595726 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.81□□□□□ -1
SHKBP1-208ENST00000595726 GTSF1Q8WW33 167 aa8.81□□□□□ -1
SHKBP1-208ENST00000595726 SMIM7Q9BQ49 75 aa8.81□□□□□ -1
SHKBP1-208ENST00000595726 DPH3P1Q9H4G8 78 aa8.81□□□□□ -1
SHKBP1-208ENST00000595726 A0A087WX48 190 aa8.8□□□□□ -1
SHKBP1-208ENST00000595726 H7C1H1 209 aa8.8□□□□□ -1
SHKBP1-208ENST00000595726 GATCO43716 136 aaKnown RBP8.8□□□□□ -1
SHKBP1-208ENST00000595726 SRP19P09132 144 aaKnown RBP8.8□□□□□ -1
SHKBP1-208ENST00000595726 NTM-AS1Q6ZSK4 140 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms