RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 COX8AP10176 69 aa7.59□□□□□ -1.19
VPS25-203ENST00000589520 ODF1Q14990 250 aa7.59□□□□□ -1.19
VPS25-203ENST00000589520 ZNF124Q15973 351 aa7.59□□□□□ -1.19
VPS25-203ENST00000589520 FAM74A4Q5TZK3 123 aa7.59□□□□□ -1.19
VPS25-203ENST00000589520 C2orf66Q6UXQ4 117 aa7.59□□□□□ -1.19
VPS25-203ENST00000589520 ZFP2Q6ZN57 461 aa7.59□□□□□ -1.19
VPS25-203ENST00000589520 DNAJC30Q96LL9 226 aa7.59□□□□□ -1.19
VPS25-203ENST00000589520 C18orf15Q96N68 181 aa7.59□□□□□ -1.19
VPS25-203ENST00000589520 JPT2Q9H910 190 aa7.59□□□□□ -1.19
VPS25-203ENST00000589520 CYSLTR1Q9Y271 337 aa7.59□□□□□ -1.19
VPS25-203ENST00000589520 HIVEP2P31629 2446 aa7.59□□□□□ -1.19
VPS25-203ENST00000589520 hDV102S1A0JD36 115 aa7.58□□□□□ -1.2
VPS25-203ENST00000589520 I3L3M4 83 aa7.58□□□□□ -1.2
VPS25-203ENST00000589520 PLNP26678 52 aa7.58□□□□□ -1.2
VPS25-203ENST00000589520 MAJINQ3KP22 176 aa7.58□□□□□ -1.2
VPS25-203ENST00000589520 PAPPA-AS1Q5QFB9 102 aa7.58□□□□□ -1.2
VPS25-203ENST00000589520 LINC00482Q8N8I6 264 aa7.58□□□□□ -1.2
VPS25-203ENST00000589520 C11orf72Q8NBR9 251 aa7.58□□□□□ -1.2
VPS25-203ENST00000589520 TIMM17AQ99595 171 aa7.58□□□□□ -1.2
VPS25-203ENST00000589520 SNHG12Q9BXW3 62 aa7.58□□□□□ -1.2
VPS25-203ENST00000589520 CUBNO60494 3623 aa7.58□□□□□ -1.2
VPS25-203ENST00000589520 RS1O15537 224 aa7.57□□□□□ -1.2
VPS25-203ENST00000589520 NPSP0C0P6 89 aa7.57□□□□□ -1.2
VPS25-203ENST00000589520 HTN1P15515 57 aa7.57□□□□□ -1.2
VPS25-203ENST00000589520 C9orf66Q5T8R8 295 aa7.57□□□□□ -1.2
VPS25-203ENST00000589520 UFSP1Q6NVU6 142 aa7.57□□□□□ -1.2
VPS25-203ENST00000589520 C12orf54Q6X4T0 127 aa7.57□□□□□ -1.2
VPS25-203ENST00000589520 C1orf158Q8N1D5 194 aa7.57□□□□□ -1.2
VPS25-203ENST00000589520 TMEM263Q8WUH6 116 aaKnown RBP7.57□□□□□ -1.2
VPS25-203ENST00000589520 MCRIP2Q9BUT9 160 aaKnown RBP7.57□□□□□ -1.2
VPS25-203ENST00000589520 F8VRH5 84 aa7.56□□□□□ -1.2
VPS25-203ENST00000589520 KRTAP10-3P60369 221 aa7.56□□□□□ -1.2
VPS25-203ENST00000589520 COL5A1-AS1Q5SY13 56 aa7.56□□□□□ -1.2
VPS25-203ENST00000589520 NEXN-AS1Q8NBZ9 246 aa7.56□□□□□ -1.2
VPS25-203ENST00000589520 C19orf73Q9NVV2 129 aa7.56□□□□□ -1.2
VPS25-203ENST00000589520 XCL2Q9UBD3 114 aa7.56□□□□□ -1.2
VPS25-203ENST00000589520 TNFRSF18Q9Y5U5 241 aa7.56□□□□□ -1.2
VPS25-203ENST00000589520 ZANQ9Y493 2812 aa7.56□□□□□ -1.2
VPS25-203ENST00000589520 MUC4Q99102 2169 aa7.55□□□□□ -1.2
VPS25-203ENST00000589520 CRYBA4P53673 196 aa7.55□□□□□ -1.2
VPS25-203ENST00000589520 DAZ2Q13117 558 aaKnown RBP7.55□□□□□ -1.2
VPS25-203ENST00000589520 CFAP126Q5VTH2 177 aa7.55□□□□□ -1.2
VPS25-203ENST00000589520 HIST2H2BDQ6DRA6 164 aa7.55□□□□□ -1.2
VPS25-203ENST00000589520 BOD1L2Q8IYS8 172 aa7.55□□□□□ -1.2
VPS25-203ENST00000589520 IL17DQ8TAD2 202 aa7.55□□□□□ -1.2
VPS25-203ENST00000589520 C16orf74Q96GX8 76 aa7.55□□□□□ -1.2
VPS25-203ENST00000589520 DKK2Q9UBU2 259 aa7.55□□□□□ -1.2
VPS25-203ENST00000589520 HHLA3Q9XRX5 114 aa7.55□□□□□ -1.2
VPS25-203ENST00000589520 CHTOPQ9Y3Y2 248 aaKnown RBP7.55□□□□□ -1.2
VPS25-203ENST00000589520 SONP18583 2426 aaKnown RBP7.54□□□□□ -1.2
VPS25-203ENST00000589520 TGP01266 2768 aa7.54□□□□□ -1.2
VPS25-203ENST00000589520 PKD1L1Q8TDX9 2849 aa7.54□□□□□ -1.2
VPS25-203ENST00000589520 EREGO14944 169 aa7.54□□□□□ -1.2
VPS25-203ENST00000589520 IGHV3-53P01767 116 aa7.54□□□□□ -1.2
VPS25-203ENST00000589520 GTSCR1Q86UQ5 136 aa7.54□□□□□ -1.2
VPS25-203ENST00000589520 RNASE8Q8TDE3 154 aaKnown RBP7.54□□□□□ -1.2
VPS25-203ENST00000589520 TLN2Q9Y4G6 2542 aa7.53□□□□□ -1.2
VPS25-203ENST00000589520 TRBV10-1A0A0K0K1A3 114 aa7.53□□□□□ -1.2
VPS25-203ENST00000589520 IGIPA6NJ69 53 aa7.53□□□□□ -1.2
VPS25-203ENST00000589520 AZU1P20160 251 aa7.53□□□□□ -1.2
VPS25-203ENST00000589520 PMVKQ15126 192 aa7.53□□□□□ -1.2
VPS25-203ENST00000589520 ANKRD39Q53RE8 183 aa7.53□□□□□ -1.2
VPS25-203ENST00000589520 STPG4Q8N801 248 aa7.53□□□□□ -1.2
VPS25-203ENST00000589520 OR4C5Q8NGB2 326 aa7.53□□□□□ -1.2
VPS25-203ENST00000589520 BAALCQ8WXS3 180 aa7.53□□□□□ -1.2
VPS25-203ENST00000589520 CITED1Q99966 193 aa7.53□□□□□ -1.2
VPS25-203ENST00000589520 OVOL2Q9BRP0 275 aa7.53□□□□□ -1.2
VPS25-203ENST00000589520 MRPL35Q9NZE8 188 aaKnown RBP7.53□□□□□ -1.2
VPS25-203ENST00000589520 TP53TG1Q9Y2A0 90 aa7.53□□□□□ -1.2
VPS25-203ENST00000589520 TRAV4A0A0B4J268 109 aa7.52□□□□□ -1.21
VPS25-203ENST00000589520 RRN3P1Q2M238 152 aa7.52□□□□□ -1.21
VPS25-203ENST00000589520 TMEM97Q5BJF2 176 aa7.52□□□□□ -1.21
VPS25-203ENST00000589520 ZC2HC1BQ5TFG8 222 aa7.52□□□□□ -1.21
VPS25-203ENST00000589520 C20orf203Q8NBC4 194 aa7.52□□□□□ -1.21
VPS25-203ENST00000589520 PYGO1Q9Y3Y4 419 aa7.52□□□□□ -1.21
VPS25-203ENST00000589520 AGRNO00468 2067 aa7.51□□□□□ -1.21
VPS25-203ENST00000589520 SMIM9A6NGZ8 99 aa7.51□□□□□ -1.21
VPS25-203ENST00000589520 PRSS29PA6NIE9 313 aa7.51□□□□□ -1.21
VPS25-203ENST00000589520 TSHBP01222 138 aa7.51□□□□□ -1.21
VPS25-203ENST00000589520 FGF6P10767 208 aa7.51□□□□□ -1.21
VPS25-203ENST00000589520 SMAGPQ0VAQ4 97 aa7.51□□□□□ -1.21
VPS25-203ENST00000589520 CSNK1G2-AS1Q8NCQ2 148 aa7.51□□□□□ -1.21
VPS25-203ENST00000589520 WFDC9Q8NEX5 89 aa7.51□□□□□ -1.21
VPS25-203ENST00000589520 HIGD1BQ9P298 99 aa7.51□□□□□ -1.21
VPS25-203ENST00000589520 SORL1Q92673 2214 aa7.5□□□□□ -1.21
VPS25-203ENST00000589520 IGHV3OR16-12A0A075B7B8 117 aa7.5□□□□□ -1.21
VPS25-203ENST00000589520 TRGV1A0A0A0MS02 117 aa7.5□□□□□ -1.21
VPS25-203ENST00000589520 GIG44P09565 113 aaPredicted RBP7.5□□□□□ -1.21
VPS25-203ENST00000589520 NMUP48645 174 aa7.5□□□□□ -1.21
VPS25-203ENST00000589520 HERVK_113P61574 105 aa7.5□□□□□ -1.21
VPS25-203ENST00000589520 CST9LQ9H4G1 147 aa7.5□□□□□ -1.21
VPS25-203ENST00000589520 MRPL16Q9NX20 251 aaKnown RBP7.5□□□□□ -1.21
VPS25-203ENST00000589520 A0A1B0GV90 55 aa7.49□□□□□ -1.21
VPS25-203ENST00000589520 P0DMU3 169 aa7.49□□□□□ -1.21
VPS25-203ENST00000589520 FAM231AP0DMU4 169 aa7.49□□□□□ -1.21
VPS25-203ENST00000589520 FAM231CP0DMU5 169 aa7.49□□□□□ -1.21
VPS25-203ENST00000589520 RPL35AP18077 110 aaKnown RBP7.49□□□□□ -1.21
VPS25-203ENST00000589520 SEC11AP67812 179 aa7.49□□□□□ -1.21
VPS25-203ENST00000589520 BATFQ16520 125 aa7.49□□□□□ -1.21
VPS25-203ENST00000589520 NEGR1Q7Z3B1 354 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms